RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SSH1Q8WYL5 1049 aa19.98■□□□□ 0.79
CCDC8-201ENST00000307522 MYO3AQ8NEV4 1616 aa19.97■□□□□ 0.79
CCDC8-201ENST00000307522 FOXO3O43524 673 aa19.97■□□□□ 0.79
CCDC8-201ENST00000307522 GTF2E1P29083 439 aaPredicted RBP19.97■□□□□ 0.79
CCDC8-201ENST00000307522 MVPQ14764 893 aaKnown RBP19.97■□□□□ 0.79
CCDC8-201ENST00000307522 MCM10Q7L590 875 aa19.97■□□□□ 0.79
CCDC8-201ENST00000307522 INSRP06213 1382 aa19.97■□□□□ 0.79
CCDC8-201ENST00000307522 DMTNQ08495 405 aa19.97■□□□□ 0.79
CCDC8-201ENST00000307522 PLCD3Q8N3E9 789 aa19.97■□□□□ 0.79
CCDC8-201ENST00000307522 NSFL1CQ9UNZ2 370 aaKnown RBP19.97■□□□□ 0.79
CCDC8-201ENST00000307522 USHBP1Q8N6Y0 703 aa19.96■□□□□ 0.79
CCDC8-201ENST00000307522 KIF2CQ99661 725 aa19.96■□□□□ 0.79
CCDC8-201ENST00000307522 ATP2B3Q16720 1220 aa19.96■□□□□ 0.79
CCDC8-201ENST00000307522 THEMISQ8N1K5 641 aaPredicted RBP19.96■□□□□ 0.79
CCDC8-201ENST00000307522 C1orf115Q9H7X2 142 aa19.96■□□□□ 0.79
CCDC8-201ENST00000307522 ZKSCAN5Q9Y2L8 839 aa19.96■□□□□ 0.79
CCDC8-201ENST00000307522 NLRP6P59044 892 aa19.95■□□□□ 0.78
CCDC8-201ENST00000307522 KLHL40Q2TBA0 621 aa19.95■□□□□ 0.78
CCDC8-201ENST00000307522 PPP4R3BQ5MIZ7 849 aa19.95■□□□□ 0.78
CCDC8-201ENST00000307522 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.78
CCDC8-201ENST00000307522 NECTIN2Q92692 538 aa19.95■□□□□ 0.78
CCDC8-201ENST00000307522 AGLP35573 1532 aa19.95■□□□□ 0.78
CCDC8-201ENST00000307522 DZIP1LQ8IYY4 767 aaKnown RBP19.95■□□□□ 0.78
CCDC8-201ENST00000307522 CCDC94Q9BW85 323 aaPredicted RBP19.95■□□□□ 0.78
CCDC8-201ENST00000307522 NOB1Q9ULX3 412 aaKnown RBP19.95■□□□□ 0.78
CCDC8-201ENST00000307522 PTPRUQ92729 1446 aa19.94■□□□□ 0.78
CCDC8-201ENST00000307522 SPATA31D1Q6ZQQ2 1576 aa19.94■□□□□ 0.78
CCDC8-201ENST00000307522 K7ELQ4 463 aaPredicted RBP19.94■□□□□ 0.78
CCDC8-201ENST00000307522 DYNC1I1O14576 645 aa19.94■□□□□ 0.78
CCDC8-201ENST00000307522 CPS1P31327 1500 aa19.93■□□□□ 0.78
CCDC8-201ENST00000307522 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
CCDC8-201ENST00000307522 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
CCDC8-201ENST00000307522 SASS6Q6UVJ0 657 aa19.93■□□□□ 0.78
CCDC8-201ENST00000307522 ZNF428Q96B54 188 aa19.92■□□□□ 0.78
CCDC8-201ENST00000307522 ZNF500O60304 480 aaPredicted RBP19.92■□□□□ 0.78
CCDC8-201ENST00000307522 ZNF710Q8N1W2 664 aa19.91■□□□□ 0.78
CCDC8-201ENST00000307522 IL13P35225 146 aa19.91■□□□□ 0.78
CCDC8-201ENST00000307522 AMPHP49418 695 aa19.91■□□□□ 0.78
CCDC8-201ENST00000307522 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
CCDC8-201ENST00000307522 ANKRD45Q5TZF3 282 aa19.9■□□□□ 0.78
CCDC8-201ENST00000307522 WDR63Q8IWG1 891 aa19.9■□□□□ 0.78
CCDC8-201ENST00000307522 DDX17Q92841 729 aaKnown RBP19.9■□□□□ 0.78
CCDC8-201ENST00000307522 TRIM27P14373 513 aa19.9■□□□□ 0.78
CCDC8-201ENST00000307522 ESCO1Q5FWF5 840 aa19.9■□□□□ 0.78
CCDC8-201ENST00000307522 ZKSCAN2Q63HK3 967 aa19.9■□□□□ 0.78
CCDC8-201ENST00000307522 ZGPATQ8N5A5 531 aaKnown RBP19.9■□□□□ 0.78
CCDC8-201ENST00000307522 GPT2Q8TD30 523 aa19.9■□□□□ 0.78
CCDC8-201ENST00000307522 PUS7Q96PZ0 661 aaKnown RBP19.9■□□□□ 0.78
CCDC8-201ENST00000307522 ABTB2Q8N961 1025 aa19.89■□□□□ 0.78
CCDC8-201ENST00000307522 NCOA3Q9Y6Q9 1424 aa19.89■□□□□ 0.78
CCDC8-201ENST00000307522 RBM25P49756 843 aaKnown RBP19.89■□□□□ 0.77
CCDC8-201ENST00000307522 PLCB2Q00722 1185 aa19.89■□□□□ 0.77
CCDC8-201ENST00000307522 SNX21Q969T3 373 aa19.88■□□□□ 0.77
CCDC8-201ENST00000307522 LMBRD1Q9NUN5 540 aa19.88■□□□□ 0.77
CCDC8-201ENST00000307522 TMEM63CQ9P1W3 806 aa19.88■□□□□ 0.77
CCDC8-201ENST00000307522 CGNQ9P2M7 1197 aaKnown RBP19.88■□□□□ 0.77
CCDC8-201ENST00000307522 CIZ1Q9ULV3 898 aaPredicted RBP19.88■□□□□ 0.77
CCDC8-201ENST00000307522 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
CCDC8-201ENST00000307522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC8-201ENST00000307522 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
CCDC8-201ENST00000307522 NSD2O96028 1365 aa19.87■□□□□ 0.77
CCDC8-201ENST00000307522 NOL8Q76FK4 1167 aaKnown RBP19.87■□□□□ 0.77
CCDC8-201ENST00000307522 HSPA2P54652 639 aa19.87■□□□□ 0.77
CCDC8-201ENST00000307522 NAP1L2Q9ULW6 460 aaPredicted RBP19.87■□□□□ 0.77
CCDC8-201ENST00000307522 FCHSD2O94868 740 aa19.86■□□□□ 0.77
CCDC8-201ENST00000307522 TBC1D9Q6ZT07 1266 aa19.86■□□□□ 0.77
CCDC8-201ENST00000307522 TTC12Q9H892 705 aaPredicted RBP19.86■□□□□ 0.77
CCDC8-201ENST00000307522 C8orf58Q8NAV2 365 aa19.86■□□□□ 0.77
CCDC8-201ENST00000307522 TERF1P54274 439 aa19.85■□□□□ 0.77
CCDC8-201ENST00000307522 PHF23Q9BUL5 403 aaPredicted RBP19.85■□□□□ 0.77
CCDC8-201ENST00000307522 APBB1O00213 710 aa19.85■□□□□ 0.77
CCDC8-201ENST00000307522 MBIPQ9NS73 344 aa19.85■□□□□ 0.77
CCDC8-201ENST00000307522 MAP3K19Q56UN5 1328 aa19.84■□□□□ 0.77
CCDC8-201ENST00000307522 PDLIM2Q96JY6 352 aa19.84■□□□□ 0.77
CCDC8-201ENST00000307522 ORAI2Q96SN7 254 aa19.84■□□□□ 0.77
CCDC8-201ENST00000307522 NRXN3Q9Y4C0 1643 aa19.84■□□□□ 0.77
CCDC8-201ENST00000307522 U2AF2P26368 475 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCDC8-201ENST00000307522 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
CCDC8-201ENST00000307522 ZNF445P59923 1031 aa19.83■□□□□ 0.77
CCDC8-201ENST00000307522 CSPP1Q1MSJ5 1256 aa19.83■□□□□ 0.77
CCDC8-201ENST00000307522 GDPD2Q9HCC8 539 aa19.83■□□□□ 0.76
CCDC8-201ENST00000307522 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.76
CCDC8-201ENST00000307522 ANKLE2Q86XL3 938 aa19.82■□□□□ 0.76
CCDC8-201ENST00000307522 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
CCDC8-201ENST00000307522 CHD1LQ86WJ1 897 aa19.81■□□□□ 0.76
CCDC8-201ENST00000307522 CCDC39Q9UFE4 941 aa19.81■□□□□ 0.76
CCDC8-201ENST00000307522 SETD1BQ9UPS6 1966 aaKnown RBP19.8■□□□□ 0.76
CCDC8-201ENST00000307522 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
CCDC8-201ENST00000307522 MTERF4Q7Z6M4 381 aaKnown RBP19.8■□□□□ 0.76
CCDC8-201ENST00000307522 PLEKHG1Q9ULL1 1385 aa19.8■□□□□ 0.76
CCDC8-201ENST00000307522 TBX22Q9Y458 520 aa19.8■□□□□ 0.76
CCDC8-201ENST00000307522 CPSF1Q10570 1443 aaKnown RBP19.79■□□□□ 0.76
CCDC8-201ENST00000307522 ATP7BP35670 1465 aa19.79■□□□□ 0.76
CCDC8-201ENST00000307522 PSME1Q06323 249 aa19.79■□□□□ 0.76
CCDC8-201ENST00000307522 KIF16BQ96L93 1317 aa19.79■□□□□ 0.76
CCDC8-201ENST00000307522 IQSEC2Q5JU85 1478 aa19.79■□□□□ 0.76
CCDC8-201ENST00000307522 DTNBO60941 627 aa19.78■□□□□ 0.76
CCDC8-201ENST00000307522 MYRIPQ8NFW9 859 aa19.78■□□□□ 0.76
CCDC8-201ENST00000307522 UTP14CQ5TAP6 766 aaKnown RBP19.78■□□□□ 0.76
CCDC8-201ENST00000307522 ZNF771Q7L3S4 317 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 662.3 ms