RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 CCDC83Q8IWF9 413 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 MBD3O95983 291 aa13.67□□□□□ -0.22
PHTF2-203ENST00000307305 PSME1Q06323 249 aa13.67□□□□□ -0.22
PHTF2-203ENST00000307305 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
PHTF2-203ENST00000307305 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
PHTF2-203ENST00000307305 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
PHTF2-203ENST00000307305 SAMD9LQ8IVG5 1584 aa13.67□□□□□ -0.22
PHTF2-203ENST00000307305 GNL2Q13823 731 aaKnown RBP13.67□□□□□ -0.22
PHTF2-203ENST00000307305 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
PHTF2-203ENST00000307305 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
PHTF2-203ENST00000307305 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
PHTF2-203ENST00000307305 CPA1P15085 419 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 JARID2Q92833 1246 aaPredicted RBP13.66□□□□□ -0.22
PHTF2-203ENST00000307305 NEUROD6Q96NK8 337 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 EIF2AK4Q9P2K8 1649 aaKnown RBP13.66□□□□□ -0.22
PHTF2-203ENST00000307305 FAM177BA6PVY3 158 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
PHTF2-203ENST00000307305 SRCIN1Q9C0H9 1055 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
PHTF2-203ENST00000307305 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
PHTF2-203ENST00000307305 MYL6BP14649 208 aa13.65□□□□□ -0.22
PHTF2-203ENST00000307305 TAF7Q15545 349 aaPredicted RBP13.65□□□□□ -0.22
PHTF2-203ENST00000307305 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
PHTF2-203ENST00000307305 BECN2A8MW95 431 aa13.65□□□□□ -0.22
PHTF2-203ENST00000307305 DNAJC2Q99543 621 aaKnown RBP13.65□□□□□ -0.22
PHTF2-203ENST00000307305 FLIIQ13045 1269 aa13.65□□□□□ -0.22
PHTF2-203ENST00000307305 RIC3Q7Z5B4 369 aa13.65□□□□□ -0.22
PHTF2-203ENST00000307305 FMNL2Q96PY5 1086 aa13.65□□□□□ -0.22
PHTF2-203ENST00000307305 PDE1AP54750 535 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 PKNOX2Q96KN3 472 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 NPC1L1Q9UHC9 1359 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 SNX21Q969T3 373 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 ATP10AO60312 1499 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
PHTF2-203ENST00000307305 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
PHTF2-203ENST00000307305 PRPF40BQ6NWY9 871 aaKnown RBP13.64□□□□□ -0.23
PHTF2-203ENST00000307305 ANKRD44Q8N8A2 993 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 IL16Q14005 1332 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 GOLGA6L19H0YKK7 550 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 CEP85Q6P2H3 762 aa13.64□□□□□ -0.23
PHTF2-203ENST00000307305 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 RBM25P49756 843 aaKnown RBP13.63□□□□□ -0.23
PHTF2-203ENST00000307305 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 TFIP11Q9UBB9 837 aaKnown RBP13.63□□□□□ -0.23
PHTF2-203ENST00000307305 TRIM5Q9C035 493 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 ISY1Q9ULR0 285 aaKnown RBP13.63□□□□□ -0.23
PHTF2-203ENST00000307305 HCLS1P14317 486 aaPredicted RBP13.63□□□□□ -0.23
PHTF2-203ENST00000307305 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
PHTF2-203ENST00000307305 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
PHTF2-203ENST00000307305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.63□□□□□ -0.23
PHTF2-203ENST00000307305 MAST1Q9Y2H9 1570 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 USP26Q9BXU7 913 aa13.63□□□□□ -0.23
PHTF2-203ENST00000307305 TPM2P07951 284 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 AACSQ86V21 672 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 LARP1BQ659C4 914 aaKnown RBP13.62□□□□□ -0.23
PHTF2-203ENST00000307305 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
PHTF2-203ENST00000307305 ACEP12821 1306 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
PHTF2-203ENST00000307305 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 BOLA2Q9H3K6 86 aa13.62□□□□□ -0.23
PHTF2-203ENST00000307305 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.62□□□□□ -0.23
PHTF2-203ENST00000307305 TAF7LQ5H9L4 462 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 RRP9O43818 475 aaKnown RBP13.61□□□□□ -0.23
PHTF2-203ENST00000307305 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
PHTF2-203ENST00000307305 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 NEXNQ0ZGT2 675 aa13.61□□□□□ -0.23
PHTF2-203ENST00000307305 MCM2P49736 904 aa13.6□□□□□ -0.23
PHTF2-203ENST00000307305 PLEKHF1Q96S99 279 aa13.6□□□□□ -0.23
PHTF2-203ENST00000307305 SIRT2Q8IXJ6 389 aa13.6□□□□□ -0.23
PHTF2-203ENST00000307305 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
PHTF2-203ENST00000307305 C17orf53Q8N3J3 647 aaPredicted RBP13.6□□□□□ -0.23
PHTF2-203ENST00000307305 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
PHTF2-203ENST00000307305 CNPY2Q9Y2B0 182 aa13.6□□□□□ -0.23
PHTF2-203ENST00000307305 TULP1O00294 542 aaPredicted RBP13.6□□□□□ -0.23
PHTF2-203ENST00000307305 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
PHTF2-203ENST00000307305 TTC37Q6PGP7 1564 aa13.6□□□□□ -0.23
PHTF2-203ENST00000307305 NSD2O96028 1365 aa13.6□□□□□ -0.23
PHTF2-203ENST00000307305 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
PHTF2-203ENST00000307305 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
PHTF2-203ENST00000307305 CYP46A1Q9Y6A2 500 aa13.59□□□□□ -0.23
PHTF2-203ENST00000307305 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
PHTF2-203ENST00000307305 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
PHTF2-203ENST00000307305 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
PHTF2-203ENST00000307305 PDRG1Q9NUG6 133 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms