RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 PIBF1Q8WXW3 757 aa24.06■■□□□ 1.44
MTCL1-201ENST00000306329 TOM1L2Q6ZVM7 507 aa24.05■■□□□ 1.44
MTCL1-201ENST00000306329 CCDC102AQ96A19 550 aa24.05■■□□□ 1.44
MTCL1-201ENST00000306329 RBM5P52756 815 aaKnown RBP eCLIP24.05■■□□□ 1.44
MTCL1-201ENST00000306329 SMTNL1A8MU46 457 aa24.05■■□□□ 1.44
MTCL1-201ENST00000306329 SPG7Q9UQ90 795 aa24.05■■□□□ 1.44
MTCL1-201ENST00000306329 KRT32Q14532 448 aa24.04■■□□□ 1.44
MTCL1-201ENST00000306329 DDX11Q96FC9 970 aa24.04■■□□□ 1.44
MTCL1-201ENST00000306329 ESPNB1AK53 854 aa24.04■■□□□ 1.44
MTCL1-201ENST00000306329 EIF5P55010 431 aaKnown RBP24.04■■□□□ 1.44
MTCL1-201ENST00000306329 CEP126Q9P2H0 1117 aa24.04■■□□□ 1.44
MTCL1-201ENST00000306329 EPB41L2O43491 1005 aaKnown RBP24.04■■□□□ 1.44
MTCL1-201ENST00000306329 SPINK5Q9NQ38 1064 aaPredicted RBP24.04■■□□□ 1.44
MTCL1-201ENST00000306329 KIAA1328Q86T90 577 aa24.04■■□□□ 1.44
MTCL1-201ENST00000306329 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
MTCL1-201ENST00000306329 RAI14Q9P0K7 980 aa24.03■■□□□ 1.44
MTCL1-201ENST00000306329 ZNF692Q9BU19 519 aaPredicted RBP24.03■■□□□ 1.44
MTCL1-201ENST00000306329 CASTP20810 708 aaKnown RBP24.03■■□□□ 1.44
MTCL1-201ENST00000306329 MAP3K11Q16584 847 aa24.02■■□□□ 1.44
MTCL1-201ENST00000306329 KIF21BO75037 1637 aa24.02■■□□□ 1.44
MTCL1-201ENST00000306329 SYCE3A1L190 88 aa24.02■■□□□ 1.44
MTCL1-201ENST00000306329 PPP1R1BQ9UD71 204 aaPredicted RBP24.02■■□□□ 1.44
MTCL1-201ENST00000306329 CAMK4Q16566 473 aa24.02■■□□□ 1.44
MTCL1-201ENST00000306329 CFAP100Q494V2 611 aa24.02■■□□□ 1.44
MTCL1-201ENST00000306329 ARHGAP29Q52LW3 1261 aa24.02■■□□□ 1.44
MTCL1-201ENST00000306329 NUTM1Q86Y26 1132 aa24.02■■□□□ 1.44
MTCL1-201ENST00000306329 TAF4BQ92750 862 aa24.01■■□□□ 1.43
MTCL1-201ENST00000306329 BTBD11A6QL63 1104 aa24.01■■□□□ 1.43
MTCL1-201ENST00000306329 EZRP15311 586 aaKnown RBP24■■□□□ 1.43
MTCL1-201ENST00000306329 WASF1Q92558 559 aa24■■□□□ 1.43
MTCL1-201ENST00000306329 ERICH4A6NGS2 130 aa24■■□□□ 1.43
MTCL1-201ENST00000306329 ZSCAN29Q8IWY8 852 aaPredicted RBP23.99■■□□□ 1.43
MTCL1-201ENST00000306329 RRS1Q15050 365 aaKnown RBP23.99■■□□□ 1.43
MTCL1-201ENST00000306329 IDH1O75874 414 aaKnown RBP23.99■■□□□ 1.43
MTCL1-201ENST00000306329 ZNF76P36508 570 aa23.99■■□□□ 1.43
MTCL1-201ENST00000306329 RPAP2Q8IXW5 612 aaPredicted RBP23.99■■□□□ 1.43
MTCL1-201ENST00000306329 NBPF8Q3BBV2 869 aa23.99■■□□□ 1.43
MTCL1-201ENST00000306329 UBXN4Q92575 508 aa23.99■■□□□ 1.43
MTCL1-201ENST00000306329 LRP2BPQ9P2M1 347 aa23.99■■□□□ 1.43
MTCL1-201ENST00000306329 FERMT3Q86UX7 667 aa23.99■■□□□ 1.43
MTCL1-201ENST00000306329 CCDC85AQ96PX6 553 aaPredicted RBP23.99■■□□□ 1.43
MTCL1-201ENST00000306329 PKNOX2Q96KN3 472 aa23.98■■□□□ 1.43
MTCL1-201ENST00000306329 IMMTQ16891 758 aaKnown RBP23.98■■□□□ 1.43
MTCL1-201ENST00000306329 TAF3Q5VWG9 929 aa23.98■■□□□ 1.43
MTCL1-201ENST00000306329 TMEM57Q8N5G2 664 aa23.98■■□□□ 1.43
MTCL1-201ENST00000306329 MATR3P43243 847 aaKnown RBP eCLIP23.97■■□□□ 1.43
MTCL1-201ENST00000306329 HFM1A2PYH4 1435 aa23.97■■□□□ 1.43
MTCL1-201ENST00000306329 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
MTCL1-201ENST00000306329 EXOC6BQ9Y2D4 811 aa23.97■■□□□ 1.43
MTCL1-201ENST00000306329 USP5P45974 858 aa23.97■■□□□ 1.43
MTCL1-201ENST00000306329 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
MTCL1-201ENST00000306329 GBP2P32456 591 aaPredicted RBP23.97■■□□□ 1.43
MTCL1-201ENST00000306329 SSR1P43307 286 aaKnown RBP23.97■■□□□ 1.43
MTCL1-201ENST00000306329 CCDC83Q8IWF9 413 aa23.97■■□□□ 1.43
MTCL1-201ENST00000306329 JAKMIP3Q5VZ66 844 aa23.96■■□□□ 1.43
MTCL1-201ENST00000306329 CCDC148Q8NFR7 591 aa23.96■■□□□ 1.43
MTCL1-201ENST00000306329 PDCL2Q8N4E4 241 aa23.96■■□□□ 1.43
MTCL1-201ENST00000306329 AIDAQ96BJ3 306 aa23.96■■□□□ 1.43
MTCL1-201ENST00000306329 ERBINQ96RT1 1412 aa23.96■■□□□ 1.43
MTCL1-201ENST00000306329 CEP131Q9UPN4 1083 aa23.95■■□□□ 1.43
MTCL1-201ENST00000306329 RTEL1-TNFRSF6BF6WH68 1400 aa23.95■■□□□ 1.42
MTCL1-201ENST00000306329 DCAF8L1A6NGE4 600 aa23.94■■□□□ 1.42
MTCL1-201ENST00000306329 MPHOSPH10O00566 681 aaKnown RBP23.94■■□□□ 1.42
MTCL1-201ENST00000306329 ZNF397Q8NF99 534 aaPredicted RBP23.94■■□□□ 1.42
MTCL1-201ENST00000306329 ANKRD30BQ9BXX2 1392 aa23.93■■□□□ 1.42
MTCL1-201ENST00000306329 ZSCAN30Q86W11 494 aa23.93■■□□□ 1.42
MTCL1-201ENST00000306329 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
MTCL1-201ENST00000306329 USP8P40818 1118 aa23.92■■□□□ 1.42
MTCL1-201ENST00000306329 PDIA4P13667 645 aaKnown RBP23.92■■□□□ 1.42
MTCL1-201ENST00000306329 SFPQP23246 707 aaKnown RBP eCLIP23.92■■□□□ 1.42
MTCL1-201ENST00000306329 PRPF40BQ6NWY9 871 aaKnown RBP23.92■■□□□ 1.42
MTCL1-201ENST00000306329 TMCO3Q6UWJ1 677 aa23.92■■□□□ 1.42
MTCL1-201ENST00000306329 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
MTCL1-201ENST00000306329 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
MTCL1-201ENST00000306329 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
MTCL1-201ENST00000306329 CRACR2AQ9BSW2 395 aa23.92■■□□□ 1.42
MTCL1-201ENST00000306329 NEBLO76041 1014 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 FCHSD2O94868 740 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 DESP17661 470 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 CFTRP13569 1480 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 IGHMBP2P38935 993 aaKnown RBP23.91■■□□□ 1.42
MTCL1-201ENST00000306329 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 ABCF2Q9UG63 623 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 CCDC184Q52MB2 194 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 BICDL1Q6ZP65 573 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 SMARCA5O60264 1052 aaPredicted RBP23.91■■□□□ 1.42
MTCL1-201ENST00000306329 PTPN14Q15678 1187 aa23.91■■□□□ 1.42
MTCL1-201ENST00000306329 MX1P20591 662 aa23.9■■□□□ 1.42
MTCL1-201ENST00000306329 KLHL10Q6JEL2 608 aa23.89■■□□□ 1.42
MTCL1-201ENST00000306329 MIS18AQ9NYP9 233 aa23.89■■□□□ 1.42
MTCL1-201ENST00000306329 SPA17Q15506 151 aa23.89■■□□□ 1.42
MTCL1-201ENST00000306329 SLFN5Q08AF3 891 aa23.89■■□□□ 1.41
MTCL1-201ENST00000306329 KIF1BPQ96EK5 621 aa23.89■■□□□ 1.41
MTCL1-201ENST00000306329 TMPOP42166 694 aaKnown RBP23.89■■□□□ 1.41
MTCL1-201ENST00000306329 GBP3Q9H0R5 595 aa23.89■■□□□ 1.41
MTCL1-201ENST00000306329 METTL24Q5JXM2 366 aa23.88■■□□□ 1.41
MTCL1-201ENST00000306329 U3KPZ7 1027 aaPredicted RBP23.88■■□□□ 1.41
MTCL1-201ENST00000306329 RRP9O43818 475 aaKnown RBP23.88■■□□□ 1.41
MTCL1-201ENST00000306329 ZSCAN12O43309 604 aa23.87■■□□□ 1.41
MTCL1-201ENST00000306329 INCENPQ9NQS7 918 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms