RNA–Protein interactions for RNA: ENST00000304672.5

PTCRA-201, Transcript of pre T cell antigen receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCRA, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-201ENST00000304672 PRIM1P49642 420 aaKnown RBP26.52■■□□□ 1.84
PTCRA-201ENST00000304672 ANKRD36BQ8N2N9 1353 aa26.52■■□□□ 1.84
PTCRA-201ENST00000304672 KLHL34Q8N239 644 aa26.51■■□□□ 1.83
PTCRA-201ENST00000304672 MEGF6O75095 1541 aa26.5■■□□□ 1.83
PTCRA-201ENST00000304672 GPR162Q16538 588 aa26.5■■□□□ 1.83
PTCRA-201ENST00000304672 COG3Q96JB2 828 aa26.5■■□□□ 1.83
PTCRA-201ENST00000304672 TESK2Q96S53 571 aa26.5■■□□□ 1.83
PTCRA-201ENST00000304672 TONSLQ96HA7 1378 aa26.49■■□□□ 1.83
PTCRA-201ENST00000304672 POLD1P28340 1107 aa26.49■■□□□ 1.83
PTCRA-201ENST00000304672 TFCP2L1Q9NZI6 479 aa26.49■■□□□ 1.83
PTCRA-201ENST00000304672 AMPHP49418 695 aa26.48■■□□□ 1.83
PTCRA-201ENST00000304672 ST20-MTHFSA0A0A6YYL1 179 aa26.46■■□□□ 1.83
PTCRA-201ENST00000304672 ZCRB1Q8TBF4 217 aaKnown RBP26.46■■□□□ 1.83
PTCRA-201ENST00000304672 C1QTNF8P60827 252 aa26.45■■□□□ 1.82
PTCRA-201ENST00000304672 NLGN2Q8NFZ4 835 aa26.44■■□□□ 1.82
PTCRA-201ENST00000304672 SENP3-EIF4A1A0A087X0R7 540 aa26.43■■□□□ 1.82
PTCRA-201ENST00000304672 PELP1Q8IZL8 1130 aaKnown RBP26.43■■□□□ 1.82
PTCRA-201ENST00000304672 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
PTCRA-201ENST00000304672 RTL1A6NKG5 1358 aa26.42■■□□□ 1.82
PTCRA-201ENST00000304672 RRS1Q15050 365 aaKnown RBP26.41■■□□□ 1.82
PTCRA-201ENST00000304672 NBPF6Q5VWK0 638 aa26.41■■□□□ 1.82
PTCRA-201ENST00000304672 NBPF4Q96M43 638 aa26.41■■□□□ 1.82
PTCRA-201ENST00000304672 USHBP1Q8N6Y0 703 aa26.4■■□□□ 1.82
PTCRA-201ENST00000304672 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.82
PTCRA-201ENST00000304672 USP47Q96K76 1375 aa26.38■■□□□ 1.81
PTCRA-201ENST00000304672 COL23A1Q86Y22 540 aaPredicted RBP26.37■■□□□ 1.81
PTCRA-201ENST00000304672 GGNBP2Q9H3C7 697 aa26.37■■□□□ 1.81
PTCRA-201ENST00000304672 C5P01031 1676 aa26.36■■□□□ 1.81
PTCRA-201ENST00000304672 FYB1O15117 783 aa26.36■■□□□ 1.81
PTCRA-201ENST00000304672 MSH5O43196 834 aa26.36■■□□□ 1.81
PTCRA-201ENST00000304672 CGNL1Q0VF96 1302 aa26.35■■□□□ 1.81
PTCRA-201ENST00000304672 YBX3P16989 372 aaKnown RBP eCLIP26.34■■□□□ 1.81
PTCRA-201ENST00000304672 RAPGEF4Q8WZA2 1011 aa26.34■■□□□ 1.81
PTCRA-201ENST00000304672 SMG6Q86US8 1419 aaKnown RBP26.33■■□□□ 1.81
PTCRA-201ENST00000304672 SLC24A1O60721 1099 aa26.33■■□□□ 1.81
PTCRA-201ENST00000304672 MSL1Q68DK7 614 aa26.33■■□□□ 1.81
PTCRA-201ENST00000304672 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
PTCRA-201ENST00000304672 TAF1LQ8IZX4 1826 aa26.32■■□□□ 1.8
PTCRA-201ENST00000304672 KIF20BQ96Q89 1820 aa26.32■■□□□ 1.8
PTCRA-201ENST00000304672 TATP17735 454 aaPredicted RBP26.31■■□□□ 1.8
PTCRA-201ENST00000304672 HSP90AB2PQ58FF8 381 aa26.3■■□□□ 1.8
PTCRA-201ENST00000304672 INSRP06213 1382 aa26.3■■□□□ 1.8
PTCRA-201ENST00000304672 TOGARAM1Q9Y4F4 1720 aa26.29■■□□□ 1.8
PTCRA-201ENST00000304672 PCDH11XQ9BZA7 1347 aa26.28■■□□□ 1.8
PTCRA-201ENST00000304672 PCDH11YQ9BZA8 1340 aa26.28■■□□□ 1.8
PTCRA-201ENST00000304672 GRIN3BO60391 1043 aa26.27■■□□□ 1.8
PTCRA-201ENST00000304672 TMF1P82094 1093 aa26.27■■□□□ 1.8
PTCRA-201ENST00000304672 PALLDQ8WX93 1383 aa26.27■■□□□ 1.8
PTCRA-201ENST00000304672 ITGB4P16144 1822 aa26.26■■□□□ 1.79
PTCRA-201ENST00000304672 FLT4P35916 1363 aa26.26■■□□□ 1.79
PTCRA-201ENST00000304672 CEP350Q5VT06 3117 aa26.25■■□□□ 1.79
PTCRA-201ENST00000304672 CYP27B1O15528 508 aa26.25■■□□□ 1.79
PTCRA-201ENST00000304672 MPRIPQ6WCQ1 1025 aa26.25■■□□□ 1.79
PTCRA-201ENST00000304672 C4BP0C0L5 1744 aa26.24■■□□□ 1.79
PTCRA-201ENST00000304672 PKD1L3Q7Z443 1732 aa26.24■■□□□ 1.79
PTCRA-201ENST00000304672 KIF24Q5T7B8 1368 aa26.22■■□□□ 1.79
PTCRA-201ENST00000304672 AMIGO3Q86WK7 504 aa26.21■■□□□ 1.79
PTCRA-201ENST00000304672 FLAD1Q8NFF5 587 aa26.21■■□□□ 1.79
PTCRA-201ENST00000304672 CD2APQ9Y5K6 639 aa26.21■■□□□ 1.79
PTCRA-201ENST00000304672 UBR3Q6ZT12 1888 aa26.2■■□□□ 1.78
PTCRA-201ENST00000304672 EMILIN1Q9Y6C2 1016 aa26.19■■□□□ 1.78
PTCRA-201ENST00000304672 ATP10DQ9P241 1426 aa26.19■■□□□ 1.78
PTCRA-201ENST00000304672 NCAPD2Q15021 1401 aa26.17■■□□□ 1.78
PTCRA-201ENST00000304672 SMIM5Q71RC9 77 aa26.17■■□□□ 1.78
PTCRA-201ENST00000304672 SMARCC1Q92922 1105 aaPredicted RBP26.17■■□□□ 1.78
PTCRA-201ENST00000304672 AK7Q96M32 723 aa26.17■■□□□ 1.78
PTCRA-201ENST00000304672 CARD14Q9BXL6 1004 aa26.17■■□□□ 1.78
PTCRA-201ENST00000304672 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
PTCRA-201ENST00000304672 HMGB2P26583 209 aaKnown RBP26.16■■□□□ 1.78
PTCRA-201ENST00000304672 PIGBQ92521 554 aa26.16■■□□□ 1.78
PTCRA-201ENST00000304672 NSD3Q9BZ95 1437 aa26.15■■□□□ 1.78
PTCRA-201ENST00000304672 ANKRD26Q9UPS8 1709 aa26.15■■□□□ 1.78
PTCRA-201ENST00000304672 PHF14O94880 888 aa26.14■■□□□ 1.78
PTCRA-201ENST00000304672 NKX1-1Q15270 411 aaPredicted RBP26.13■■□□□ 1.77
PTCRA-201ENST00000304672 CDCA8Q53HL2 280 aa26.13■■□□□ 1.77
PTCRA-201ENST00000304672 ADCY9O60503 1353 aa26.12■■□□□ 1.77
PTCRA-201ENST00000304672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.12■■□□□ 1.77
PTCRA-201ENST00000304672 PPM1GO15355 546 aaPredicted RBP26.11■■□□□ 1.77
PTCRA-201ENST00000304672 LINC00116Q8NCU8 138 aa26.1■■□□□ 1.77
PTCRA-201ENST00000304672 WWC3Q9ULE0 1092 aa26.1■■□□□ 1.77
PTCRA-201ENST00000304672 SPG7Q9UQ90 795 aa26.1■■□□□ 1.77
PTCRA-201ENST00000304672 IGSF1Q8N6C5 1336 aa26.1■■□□□ 1.77
PTCRA-201ENST00000304672 LOC102724428A0A0B4J2F2 783 aa26.09■■□□□ 1.77
PTCRA-201ENST00000304672 SIK1P57059 783 aa26.09■■□□□ 1.77
PTCRA-201ENST00000304672 SSFA2P28290 1259 aa26.08■■□□□ 1.77
PTCRA-201ENST00000304672 GPBP1L1Q9HC44 474 aaPredicted RBP26.08■■□□□ 1.77
PTCRA-201ENST00000304672 EYA1Q99502 592 aa26.07■■□□□ 1.76
PTCRA-201ENST00000304672 WASHC2AQ641Q2 1341 aa26.07■■□□□ 1.76
PTCRA-201ENST00000304672 ASAP1Q9ULH1 1129 aa26.06■■□□□ 1.76
PTCRA-201ENST00000304672 ITPK1Q13572 414 aa26.05■■□□□ 1.76
PTCRA-201ENST00000304672 ZNF526Q8TF50 670 aaPredicted RBP26.05■■□□□ 1.76
PTCRA-201ENST00000304672 TMOD3Q9NYL9 352 aa26.05■■□□□ 1.76
PTCRA-201ENST00000304672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.04■■□□□ 1.76
PTCRA-201ENST00000304672 GNPATO15228 680 aa26.02■■□□□ 1.76
PTCRA-201ENST00000304672 PHKG2P15735 406 aa26.02■■□□□ 1.76
PTCRA-201ENST00000304672 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
PTCRA-201ENST00000304672 ATP6V1AP38606 617 aa26.01■■□□□ 1.75
PTCRA-201ENST00000304672 IFNL2Q8IZJ0 200 aa26.01■■□□□ 1.75
PTCRA-201ENST00000304672 POLKQ9UBT6 870 aa26.01■■□□□ 1.75
PTCRA-201ENST00000304672 ATG3Q9NT62 314 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms