RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 CPSF2Q9P2I0 782 aaKnown RBP12.74□□□□□ -0.37
MECP2-201ENST00000303391 ARFGAP3Q9NP61 516 aa12.74□□□□□ -0.37
MECP2-201ENST00000303391 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
MECP2-201ENST00000303391 CEP63Q96MT8 703 aa12.74□□□□□ -0.37
MECP2-201ENST00000303391 ALS2CR12Q96Q35 445 aa12.74□□□□□ -0.37
MECP2-201ENST00000303391 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.74□□□□□ -0.37
MECP2-201ENST00000303391 TNNT1P13805 278 aa12.74□□□□□ -0.37
MECP2-201ENST00000303391 TERF1P54274 439 aa12.74□□□□□ -0.37
MECP2-201ENST00000303391 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
MECP2-201ENST00000303391 STX1AQ16623 288 aa12.74□□□□□ -0.37
MECP2-201ENST00000303391 HFM1A2PYH4 1435 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 CKAP4Q07065 602 aaKnown RBP12.73□□□□□ -0.37
MECP2-201ENST00000303391 CLIP2Q9UDT6 1046 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 RBM25P49756 843 aaKnown RBP12.73□□□□□ -0.37
MECP2-201ENST00000303391 PAFAH1B1P43034 410 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 CFAP100Q494V2 611 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
MECP2-201ENST00000303391 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 PYM1Q9BRP8 204 aaKnown RBP12.73□□□□□ -0.37
MECP2-201ENST00000303391 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
MECP2-201ENST00000303391 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
MECP2-201ENST00000303391 CTNNA3Q9UI47 895 aa12.73□□□□□ -0.37
MECP2-201ENST00000303391 IFFO1Q0D2I5 559 aa12.72□□□□□ -0.37
MECP2-201ENST00000303391 USO1O60763 962 aaKnown RBP12.72□□□□□ -0.37
MECP2-201ENST00000303391 CEP112Q8N8E3 955 aa12.72□□□□□ -0.37
MECP2-201ENST00000303391 GTF2F1P35269 517 aaKnown RBP eCLIP12.72□□□□□ -0.372e-7■■□□□ 12.5
MECP2-201ENST00000303391 SWAP70Q9UH65 585 aa12.72□□□□□ -0.37
MECP2-201ENST00000303391 PPP1R12BO60237 982 aaPredicted RBP12.72□□□□□ -0.37
MECP2-201ENST00000303391 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
MECP2-201ENST00000303391 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
MECP2-201ENST00000303391 TOP1P11387 765 aaKnown RBP12.71□□□□□ -0.37
MECP2-201ENST00000303391 CCDC57Q2TAC2 916 aa12.71□□□□□ -0.37
MECP2-201ENST00000303391 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
MECP2-201ENST00000303391 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
MECP2-201ENST00000303391 ANKRD62A6NC57 917 aa12.71□□□□□ -0.37
MECP2-201ENST00000303391 SH3BGRP55822 239 aaPredicted RBP12.71□□□□□ -0.37
MECP2-201ENST00000303391 CCDC50Q8IVM0 306 aa12.71□□□□□ -0.37
MECP2-201ENST00000303391 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
MECP2-201ENST00000303391 SEPT6Q14141 434 aa12.71□□□□□ -0.37
MECP2-201ENST00000303391 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.38
MECP2-201ENST00000303391 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.38
MECP2-201ENST00000303391 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.38
MECP2-201ENST00000303391 CASKIN1Q8WXD9 1431 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 SNW1Q13573 536 aaKnown RBP12.7□□□□□ -0.38
MECP2-201ENST00000303391 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 CEP135Q66GS9 1140 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 ZSCAN25Q6NSZ9 544 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 DNAI2Q9GZS0 605 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 LMAN1P49257 510 aa12.7□□□□□ -0.38
MECP2-201ENST00000303391 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
MECP2-201ENST00000303391 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
MECP2-201ENST00000303391 FKBP15Q5T1M5 1219 aa12.69□□□□□ -0.38
MECP2-201ENST00000303391 OPA1O60313 960 aa12.69□□□□□ -0.38
MECP2-201ENST00000303391 RSRC1Q96IZ7 334 aaKnown RBP12.69□□□□□ -0.38
MECP2-201ENST00000303391 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
MECP2-201ENST00000303391 A0A1B0GUA9 196 aa12.69□□□□□ -0.38
MECP2-201ENST00000303391 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
MECP2-201ENST00000303391 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
MECP2-201ENST00000303391 DAAM2Q86T65 1068 aa12.69□□□□□ -0.38
MECP2-201ENST00000303391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
MECP2-201ENST00000303391 FAM177A1Q8N128 213 aaPredicted RBP12.69□□□□□ -0.38
MECP2-201ENST00000303391 TIAM1Q13009 1591 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 WASHC4Q2M389 1173 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 MEX3CQ5U5Q3 659 aaKnown RBP12.68□□□□□ -0.38
MECP2-201ENST00000303391 PDRG1Q9NUG6 133 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 GGT6Q6P531 493 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 GOLIM4O00461 696 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 FOSBP53539 338 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
MECP2-201ENST00000303391 XPCQ01831 940 aaPredicted RBP12.68□□□□□ -0.38
MECP2-201ENST00000303391 RASSF4Q9H2L5 321 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 UBE2HP62256 183 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
MECP2-201ENST00000303391 OGFRQ9NZT2 677 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 ABCC11Q96J66 1382 aa12.68□□□□□ -0.38
MECP2-201ENST00000303391 YEATS4O95619 227 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 HMGB1P09429 215 aaKnown RBP12.67□□□□□ -0.38
MECP2-201ENST00000303391 TDO2P48775 406 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 TTC14Q96N46 770 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 MSL1Q68DK7 614 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 C16orf45Q96MC5 204 aaPredicted RBP12.67□□□□□ -0.38
MECP2-201ENST00000303391 HSF2BPO75031 334 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 TRIM21P19474 475 aaKnown RBP12.67□□□□□ -0.38
MECP2-201ENST00000303391 IFI16Q16666 785 aaKnown RBP12.67□□□□□ -0.38
MECP2-201ENST00000303391 GABPB1Q06547 395 aaPredicted RBP12.67□□□□□ -0.38
MECP2-201ENST00000303391 B4GALNT4Q76KP1 1039 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 ELL2O00472 640 aaPredicted RBP12.67□□□□□ -0.38
MECP2-201ENST00000303391 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
MECP2-201ENST00000303391 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
MECP2-201ENST00000303391 EBAG9O00559 213 aa12.66□□□□□ -0.38
MECP2-201ENST00000303391 DNAJC21Q5F1R6 531 aaKnown RBP12.66□□□□□ -0.38
MECP2-201ENST00000303391 A0A1B0GUL7 405 aa12.66□□□□□ -0.38
MECP2-201ENST00000303391 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
MECP2-201ENST00000303391 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms