RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 RAPGEF4Q8WZA2 1011 aa26.76■■□□□ 1.87
SCAMP3-201ENST00000302631 RSPH6AQ9H0K4 717 aa26.76■■□□□ 1.87
SCAMP3-201ENST00000302631 HMOX1P09601 288 aa26.75■■□□□ 1.87
SCAMP3-201ENST00000302631 PNISRQ8TF01 805 aaKnown RBP26.75■■□□□ 1.87
SCAMP3-201ENST00000302631 SHANK3Q9BYB0 1731 aa26.75■■□□□ 1.87
SCAMP3-201ENST00000302631 TATP17735 454 aaPredicted RBP26.74■■□□□ 1.87
SCAMP3-201ENST00000302631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.73■■□□□ 1.87
SCAMP3-201ENST00000302631 TNS2Q63HR2 1409 aa26.72■■□□□ 1.87
SCAMP3-201ENST00000302631 DDB1Q16531 1140 aa26.71■■□□□ 1.87
SCAMP3-201ENST00000302631 ADAMTS8Q9UP79 889 aa26.71■■□□□ 1.87
SCAMP3-201ENST00000302631 EXOC5O00471 708 aa26.7■■□□□ 1.86
SCAMP3-201ENST00000302631 WDR43Q15061 677 aaKnown RBP eCLIP26.7■■□□□ 1.86
SCAMP3-201ENST00000302631 ZCRB1Q8TBF4 217 aaKnown RBP26.69■■□□□ 1.86
SCAMP3-201ENST00000302631 PLEKHF1Q96S99 279 aa26.69■■□□□ 1.86
SCAMP3-201ENST00000302631 PRKAR2BP31323 418 aa26.68■■□□□ 1.86
SCAMP3-201ENST00000302631 AMOTQ4VCS5 1084 aa26.67■■□□□ 1.86
SCAMP3-201ENST00000302631 PNNQ9H307 717 aaKnown RBP26.66■■□□□ 1.86
SCAMP3-201ENST00000302631 PLEKHO1Q53GL0 409 aaPredicted RBP26.65■■□□□ 1.86
SCAMP3-201ENST00000302631 SPG7Q9UQ90 795 aa26.65■■□□□ 1.86
SCAMP3-201ENST00000302631 A0A0G2JS52 829 aa26.64■■□□□ 1.85
SCAMP3-201ENST00000302631 MYT1Q01538 1121 aa26.64■■□□□ 1.85
SCAMP3-201ENST00000302631 PHACTR3Q96KR7 559 aa26.64■■□□□ 1.85
SCAMP3-201ENST00000302631 KRT27Q7Z3Y8 459 aa26.63■■□□□ 1.85
SCAMP3-201ENST00000302631 MARCH10Q8NA82 808 aaPredicted RBP26.63■■□□□ 1.85
SCAMP3-201ENST00000302631 PCDH11XQ9BZA7 1347 aa26.62■■□□□ 1.85
SCAMP3-201ENST00000302631 PCDH11YQ9BZA8 1340 aa26.62■■□□□ 1.85
SCAMP3-201ENST00000302631 BCL9O00512 1426 aa26.62■■□□□ 1.85
SCAMP3-201ENST00000302631 CYP27B1O15528 508 aa26.62■■□□□ 1.85
SCAMP3-201ENST00000302631 PDE3BQ13370 1112 aa26.62■■□□□ 1.85
SCAMP3-201ENST00000302631 MTHFSDQ2M296 383 aaKnown RBP26.61■■□□□ 1.85
SCAMP3-201ENST00000302631 NKX1-1Q15270 411 aaPredicted RBP26.59■■□□□ 1.85
SCAMP3-201ENST00000302631 PHKG2P15735 406 aa26.58■■□□□ 1.85
SCAMP3-201ENST00000302631 RUNDC1Q96C34 613 aa26.58■■□□□ 1.85
SCAMP3-201ENST00000302631 IFNL2Q8IZJ0 200 aa26.57■■□□□ 1.84
SCAMP3-201ENST00000302631 GAS2L2Q8NHY3 880 aa26.57■■□□□ 1.84
SCAMP3-201ENST00000302631 DDX54Q8TDD1 881 aaKnown RBP26.57■■□□□ 1.84
SCAMP3-201ENST00000302631 DLG5Q8TDM6 1919 aa26.57■■□□□ 1.84
SCAMP3-201ENST00000302631 SBF2Q86WG5 1849 aa26.56■■□□□ 1.84
SCAMP3-201ENST00000302631 ZNF530Q6P9A1 599 aaPredicted RBP26.56■■□□□ 1.84
SCAMP3-201ENST00000302631 ADAMTS7Q9UKP4 1686 aa26.55■■□□□ 1.84
SCAMP3-201ENST00000302631 VIRMAQ69YN4 1812 aaKnown RBP26.55■■□□□ 1.84
SCAMP3-201ENST00000302631 AKAP4Q5JQC9 854 aa26.55■■□□□ 1.84
SCAMP3-201ENST00000302631 FAM9BQ8IZU0 186 aa26.55■■□□□ 1.84
SCAMP3-201ENST00000302631 NEFMP07197 916 aa26.54■■□□□ 1.84
SCAMP3-201ENST00000302631 CCDC146Q8IYE0 955 aa26.54■■□□□ 1.84
SCAMP3-201ENST00000302631 MAPK8IP3Q9UPT6 1336 aa26.53■■□□□ 1.84
SCAMP3-201ENST00000302631 SCN11AQ9UI33 1791 aa26.52■■□□□ 1.84
SCAMP3-201ENST00000302631 NFE2L2Q16236 605 aa26.52■■□□□ 1.84
SCAMP3-201ENST00000302631 FAM196AQ6ZSG2 479 aa26.52■■□□□ 1.84
SCAMP3-201ENST00000302631 ILDR2Q71H61 639 aa26.52■■□□□ 1.84
SCAMP3-201ENST00000302631 HSP90AB1P08238 724 aaKnown RBP26.51■■□□□ 1.83
SCAMP3-201ENST00000302631 TOGARAM1Q9Y4F4 1720 aa26.51■■□□□ 1.83
SCAMP3-201ENST00000302631 C1orf141Q5JVX7 400 aa26.5■■□□□ 1.83
SCAMP3-201ENST00000302631 FAM182BQ5T319 152 aa26.5■■□□□ 1.83
SCAMP3-201ENST00000302631 TMPOP42166 694 aaKnown RBP26.49■■□□□ 1.83
SCAMP3-201ENST00000302631 MAP3K5Q99683 1374 aa26.49■■□□□ 1.83
SCAMP3-201ENST00000302631 KDM6AO15550 1401 aaPredicted RBP26.49■■□□□ 1.83
SCAMP3-201ENST00000302631 GNAT3A8MTJ3 354 aa26.48■■□□□ 1.83
SCAMP3-201ENST00000302631 HTATSF1O43719 755 aaKnown RBP26.48■■□□□ 1.83
SCAMP3-201ENST00000302631 DOT1LQ8TEK3 1739 aa26.48■■□□□ 1.83
SCAMP3-201ENST00000302631 DCAF5Q96JK2 942 aa26.48■■□□□ 1.83
SCAMP3-201ENST00000302631 ITGB4P16144 1822 aa26.47■■□□□ 1.83
SCAMP3-201ENST00000302631 NCBP3Q53F19 620 aaKnown RBP26.47■■□□□ 1.83
SCAMP3-201ENST00000302631 KAT6BQ8WYB5 2073 aa26.47■■□□□ 1.83
SCAMP3-201ENST00000302631 NHSQ6T4R5 1651 aa26.46■■□□□ 1.83
SCAMP3-201ENST00000302631 APAF1O14727 1248 aa26.46■■□□□ 1.83
SCAMP3-201ENST00000302631 CEMIPQ8WUJ3 1361 aa26.44■■□□□ 1.82
SCAMP3-201ENST00000302631 RNMTO43148 476 aaKnown RBP26.44■■□□□ 1.82
SCAMP3-201ENST00000302631 MPRIPQ6WCQ1 1025 aa26.44■■□□□ 1.82
SCAMP3-201ENST00000302631 ERVV-2B6SEH9 535 aa26.43■■□□□ 1.82
SCAMP3-201ENST00000302631 RIPK4P57078 832 aa26.43■■□□□ 1.82
SCAMP3-201ENST00000302631 IL17REQ8NFR9 667 aa26.43■■□□□ 1.82
SCAMP3-201ENST00000302631 LGR6Q9HBX8 967 aa26.43■■□□□ 1.82
SCAMP3-201ENST00000302631 MRC1P22897 1456 aa26.43■■□□□ 1.82
SCAMP3-201ENST00000302631 EP400Q96L91 3159 aa26.42■■□□□ 1.82
SCAMP3-201ENST00000302631 SIPA1L3O60292 1781 aaPredicted RBP26.41■■□□□ 1.82
SCAMP3-201ENST00000302631 TRIM35Q9UPQ4 493 aa26.4■■□□□ 1.82
SCAMP3-201ENST00000302631 RRP7AQ9Y3A4 280 aaKnown RBP26.39■■□□□ 1.82
SCAMP3-201ENST00000302631 PRIM1P49642 420 aaKnown RBP26.39■■□□□ 1.81
SCAMP3-201ENST00000302631 ACSBG1Q96GR2 724 aa26.39■■□□□ 1.81
SCAMP3-201ENST00000302631 BCL11BQ9C0K0 894 aaPredicted RBP26.39■■□□□ 1.81
SCAMP3-201ENST00000302631 TNS1Q9HBL0 1735 aaKnown RBP26.38■■□□□ 1.81
SCAMP3-201ENST00000302631 KCNQ2O43526 872 aa26.38■■□□□ 1.81
SCAMP3-201ENST00000302631 LMOD3Q0VAK6 560 aa26.38■■□□□ 1.81
SCAMP3-201ENST00000302631 CCDC27Q2M243 656 aa26.38■■□□□ 1.81
SCAMP3-201ENST00000302631 NGEFQ8N5V2 710 aa26.38■■□□□ 1.81
SCAMP3-201ENST00000302631 RTF1Q92541 710 aaKnown RBP26.38■■□□□ 1.81
SCAMP3-201ENST00000302631 BTAF1O14981 1849 aa26.37■■□□□ 1.81
SCAMP3-201ENST00000302631 NEUROD2Q15784 382 aa26.36■■□□□ 1.81
SCAMP3-201ENST00000302631 MCM10Q7L590 875 aa26.36■■□□□ 1.81
SCAMP3-201ENST00000302631 SLC52A2Q9HAB3 445 aa26.36■■□□□ 1.81
SCAMP3-201ENST00000302631 TRIM37O94972 964 aa26.35■■□□□ 1.81
SCAMP3-201ENST00000302631 DCTN1Q14203 1278 aa26.35■■□□□ 1.81
SCAMP3-201ENST00000302631 PTF1AQ7RTS3 328 aa26.35■■□□□ 1.81
SCAMP3-201ENST00000302631 CABP4P57796 275 aa26.33■■□□□ 1.81
SCAMP3-201ENST00000302631 NFATC2IPQ8NCF5 419 aa26.33■■□□□ 1.81
SCAMP3-201ENST00000302631 PIGBQ92521 554 aa26.33■■□□□ 1.81
SCAMP3-201ENST00000302631 CCDC125Q86Z20 511 aa26.32■■□□□ 1.8
SCAMP3-201ENST00000302631 TMOD3Q9NYL9 352 aa26.31■■□□□ 1.8
SCAMP3-201ENST00000302631 PAPPAQ13219 1627 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms