RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 GOLGA6L9A6NEM1 432 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 PDRG1Q9NUG6 133 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 HSP90AB3PQ58FF7 597 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 PDCL3Q9H2J4 239 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 PRXQ9BXM0 1461 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 RBM10P98175 930 aaKnown RBP8.97□□□□□ -0.97
SF3B3-201ENST00000302516 RPGRIP1LQ68CZ1 1315 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 GSDMDP57764 484 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 WWC2Q6AWC2 1192 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 CCDC83Q8IWF9 413 aa8.97□□□□□ -0.97
SF3B3-201ENST00000302516 ARHGAP29Q52LW3 1261 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 RAB11FIP3O75154 756 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 CAMSAP2Q08AD1 1489 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 GOLGA6L10A0A0M3HER8 536 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 DYNC1I1O14576 645 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 BLOC1S2Q6QNY1 142 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 CRACR2AQ9BSW2 395 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 NSD2O96028 1365 aa8.96□□□□□ -0.97
SF3B3-201ENST00000302516 ALDH1L2Q3SY69 923 aa8.96□□□□□ -0.98
SF3B3-201ENST00000302516 CCDC91Q7Z6B0 441 aa8.96□□□□□ -0.98
SF3B3-201ENST00000302516 RALGAPBQ86X10 1494 aa8.96□□□□□ -0.98
SF3B3-201ENST00000302516 PRKAR2BP31323 418 aa8.96□□□□□ -0.98
SF3B3-201ENST00000302516 DNAJC2Q99543 621 aaKnown RBP8.96□□□□□ -0.98
SF3B3-201ENST00000302516 IFT140Q96RY7 1462 aa8.96□□□□□ -0.98
SF3B3-201ENST00000302516 FMNL2Q96PY5 1086 aa8.96□□□□□ -0.98
SF3B3-201ENST00000302516 GIMAP7Q8NHV1 300 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 POLR3GO15318 223 aaPredicted RBP8.95□□□□□ -0.98
SF3B3-201ENST00000302516 PTPN14Q15678 1187 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 KIAA1328Q86T90 577 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 KIF5CO60282 957 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 BRPF1P55201 1214 aaPredicted RBP8.95□□□□□ -0.98
SF3B3-201ENST00000302516 EXOSC9Q06265 439 aaKnown RBP8.95□□□□□ -0.98
SF3B3-201ENST00000302516 TAF4BQ92750 862 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 ANO10Q9NW15 660 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 PPP1R12BO60237 982 aaPredicted RBP8.95□□□□□ -0.98
SF3B3-201ENST00000302516 CASQ1P31415 396 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 PRIMPOLQ96LW4 560 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 CNKSR2Q8WXI2 1034 aa8.95□□□□□ -0.98
SF3B3-201ENST00000302516 BMP2KQ9NSY1 1161 aaPredicted RBP8.95□□□□□ -0.98
SF3B3-201ENST00000302516 LRPPRCP42704 1394 aaKnown RBP8.95□□□□□ -0.98
SF3B3-201ENST00000302516 FGFR1OPO95684 399 aaKnown RBP8.94□□□□□ -0.98
SF3B3-201ENST00000302516 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
SF3B3-201ENST00000302516 NEFHP12036 1026 aa8.94□□□□□ -0.98
SF3B3-201ENST00000302516 RPAP2Q8IXW5 612 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-201ENST00000302516 DYDC1Q8WWB3 177 aa8.94□□□□□ -0.98
SF3B3-201ENST00000302516 HMGB1P09429 215 aaKnown RBP8.94□□□□□ -0.98
SF3B3-201ENST00000302516 ZNF692Q9BU19 519 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-201ENST00000302516 CABP2Q9NPB3 220 aa8.94□□□□□ -0.98
SF3B3-201ENST00000302516 SYCE3A1L190 88 aa8.94□□□□□ -0.98
SF3B3-201ENST00000302516 VPS36Q86VN1 386 aa8.94□□□□□ -0.98
SF3B3-201ENST00000302516 DNAI2Q9GZS0 605 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 TRIM21P19474 475 aaKnown RBP8.93□□□□□ -0.98
SF3B3-201ENST00000302516 FCHSD2O94868 740 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 HMGB2P26583 209 aaKnown RBP8.93□□□□□ -0.98
SF3B3-201ENST00000302516 PYM1Q9BRP8 204 aaKnown RBP8.93□□□□□ -0.98
SF3B3-201ENST00000302516 PAXBP1Q9Y5B6 917 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 U3KPZ7 1027 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-201ENST00000302516 SPA17Q15506 151 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 EHBP1Q8NDI1 1231 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 CDCA7LQ96GN5 454 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 LUZP1Q86V48 1076 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 POTEJP0CG39 1038 aa8.93□□□□□ -0.98
SF3B3-201ENST00000302516 CASTP20810 708 aaKnown RBP8.93□□□□□ -0.98
SF3B3-201ENST00000302516 ADGBQ8N7X0 1667 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 NSD3Q9BZ95 1437 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 UVSSAQ2YD98 709 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 TUBB4AP04350 444 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 CETN2P41208 172 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 STX1AQ16623 288 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 CENPHQ9H3R5 247 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 GCOM1H8Y6P7 765 aaPredicted RBP8.92□□□□□ -0.98
SF3B3-201ENST00000302516 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 MYZAPP0CAP1 466 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 TUBB4BP68371 445 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 CEBPZQ03701 1054 aaKnown RBP8.92□□□□□ -0.98
SF3B3-201ENST00000302516 GGNBP2Q9H3C7 697 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 ATF3P18847 181 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 AIMP1Q12904 312 aaKnown RBP8.92□□□□□ -0.98
SF3B3-201ENST00000302516 NCOA1Q15788 1441 aa8.92□□□□□ -0.98
SF3B3-201ENST00000302516 DDX19AQ9NUU7 478 aaKnown RBP8.92□□□□□ -0.98
SF3B3-201ENST00000302516 TOPBP1Q92547 1522 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 AACSQ86V21 672 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 JAKMIP1Q96N16 626 aaKnown RBP8.91□□□□□ -0.98
SF3B3-201ENST00000302516 SLFN5Q08AF3 891 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 CFAP100Q494V2 611 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 SOGA3Q5TF21 947 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 LRRFIP2Q9Y608 721 aaKnown RBP8.91□□□□□ -0.98
SF3B3-201ENST00000302516 AEBP2Q6ZN18 517 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-201ENST00000302516 CCDC150Q8NCX0 1101 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 ALS2CR12Q96Q35 445 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 CCDC196A0A1B0GTZ2 297 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 UBAC1Q9BSL1 405 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 TANGO6Q9C0B7 1094 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 ZNF287Q9HBT7 754 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 CLIP2Q9UDT6 1046 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 CCDC171Q6TFL3 1326 aa8.91□□□□□ -0.98
SF3B3-201ENST00000302516 FYB1O15117 783 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms