RNA–Protein interactions for RNA: ENST00000302392.4

TMEM42-201, Transcript of transmembrane protein 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM42, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-201ENST00000302392 CCNL1Q9UK58 526 aaPredicted RBP24.55■■□□□ 1.52
TMEM42-201ENST00000302392 C5P01031 1676 aa24.55■■□□□ 1.52
TMEM42-201ENST00000302392 SBNO2Q9Y2G9 1366 aa24.54■■□□□ 1.52
TMEM42-201ENST00000302392 CD163L1Q9NR16 1453 aa24.54■■□□□ 1.52
TMEM42-201ENST00000302392 PRIM1P49642 420 aaKnown RBP24.54■■□□□ 1.52
TMEM42-201ENST00000302392 ZNF526Q8TF50 670 aaPredicted RBP24.54■■□□□ 1.52
TMEM42-201ENST00000302392 COL23A1Q86Y22 540 aaPredicted RBP24.53■■□□□ 1.52
TMEM42-201ENST00000302392 ROCK2O75116 1388 aaKnown RBP24.53■■□□□ 1.52
TMEM42-201ENST00000302392 EDC4Q6P2E9 1401 aaKnown RBP24.5■■□□□ 1.51
TMEM42-201ENST00000302392 CD2APQ9Y5K6 639 aa24.49■■□□□ 1.51
TMEM42-201ENST00000302392 USP47Q96K76 1375 aa24.49■■□□□ 1.51
TMEM42-201ENST00000302392 RGPD2P0DJD1 1756 aa24.49■■□□□ 1.51
TMEM42-201ENST00000302392 LTV1Q96GA3 475 aaPredicted RBP24.48■■□□□ 1.51
TMEM42-201ENST00000302392 TAF1LQ8IZX4 1826 aa24.47■■□□□ 1.51
TMEM42-201ENST00000302392 MEGF6O75095 1541 aa24.47■■□□□ 1.51
TMEM42-201ENST00000302392 IP6K1Q92551 441 aa24.46■■□□□ 1.51
TMEM42-201ENST00000302392 L3MBTL2Q969R5 705 aa24.45■■□□□ 1.5
TMEM42-201ENST00000302392 HDGFL2Q7Z4V5 671 aaPredicted RBP24.44■■□□□ 1.5
TMEM42-201ENST00000302392 ZCRB1Q8TBF4 217 aaKnown RBP24.43■■□□□ 1.5
TMEM42-201ENST00000302392 TMC1Q8TDI8 760 aa24.42■■□□□ 1.5
TMEM42-201ENST00000302392 TOGARAM1Q9Y4F4 1720 aa24.41■■□□□ 1.5
TMEM42-201ENST00000302392 A0A1W2PP64 1363 aa24.41■■□□□ 1.5
TMEM42-201ENST00000302392 IGSF1Q8N6C5 1336 aa24.4■■□□□ 1.5
TMEM42-201ENST00000302392 CICQ96RK0 1608 aaPredicted RBP24.4■■□□□ 1.5
TMEM42-201ENST00000302392 FLAD1Q8NFF5 587 aa24.4■■□□□ 1.5
TMEM42-201ENST00000302392 C4BP0C0L5 1744 aa24.4■■□□□ 1.5
TMEM42-201ENST00000302392 KIF3CO14782 793 aa24.39■■□□□ 1.49
TMEM42-201ENST00000302392 WWC3Q9ULE0 1092 aa24.39■■□□□ 1.49
TMEM42-201ENST00000302392 UBR3Q6ZT12 1888 aa24.37■■□□□ 1.49
TMEM42-201ENST00000302392 HOXC9P31274 260 aa24.36■■□□□ 1.49
TMEM42-201ENST00000302392 APLP1P51693 650 aa24.36■■□□□ 1.49
TMEM42-201ENST00000302392 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
TMEM42-201ENST00000302392 PALLDQ8WX93 1383 aa24.36■■□□□ 1.49
TMEM42-201ENST00000302392 MAP3K19Q56UN5 1328 aa24.35■■□□□ 1.49
TMEM42-201ENST00000302392 TERF2IPQ9NYB0 399 aa24.35■■□□□ 1.49
TMEM42-201ENST00000302392 HMGB2P26583 209 aaKnown RBP24.34■■□□□ 1.49
TMEM42-201ENST00000302392 AMPHP49418 695 aa24.33■■□□□ 1.49
TMEM42-201ENST00000302392 NSD3Q9BZ95 1437 aa24.33■■□□□ 1.49
TMEM42-201ENST00000302392 RTL1A6NKG5 1358 aa24.32■■□□□ 1.48
TMEM42-201ENST00000302392 AK7Q96M32 723 aa24.32■■□□□ 1.48
TMEM42-201ENST00000302392 CGNL1Q0VF96 1302 aa24.32■■□□□ 1.48
TMEM42-201ENST00000302392 WDR90Q96KV7 1748 aa24.31■■□□□ 1.48
TMEM42-201ENST00000302392 ITGB4P16144 1822 aa24.31■■□□□ 1.48
TMEM42-201ENST00000302392 COG3Q96JB2 828 aa24.3■■□□□ 1.48
TMEM42-201ENST00000302392 SMG6Q86US8 1419 aaKnown RBP24.29■■□□□ 1.48
TMEM42-201ENST00000302392 PHF14O94880 888 aa24.29■■□□□ 1.48
TMEM42-201ENST00000302392 AMIGO3Q86WK7 504 aa24.28■■□□□ 1.48
TMEM42-201ENST00000302392 USHBP1Q8N6Y0 703 aa24.28■■□□□ 1.48
TMEM42-201ENST00000302392 RAPGEF4Q8WZA2 1011 aa24.28■■□□□ 1.48
TMEM42-201ENST00000302392 PCDH11XQ9BZA7 1347 aa24.28■■□□□ 1.48
TMEM42-201ENST00000302392 PCDH11YQ9BZA8 1340 aa24.28■■□□□ 1.48
TMEM42-201ENST00000302392 NBPF6Q5VWK0 638 aa24.26■■□□□ 1.47
TMEM42-201ENST00000302392 NBPF4Q96M43 638 aa24.26■■□□□ 1.47
TMEM42-201ENST00000302392 KIAA1551Q9HCM1 1747 aa24.26■■□□□ 1.47
TMEM42-201ENST00000302392 KIF13BQ9NQT8 1826 aa24.26■■□□□ 1.47
TMEM42-201ENST00000302392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.25■■□□□ 1.47
TMEM42-201ENST00000302392 TOMM70O94826 608 aa24.25■■□□□ 1.47
TMEM42-201ENST00000302392 FBLN1P23142 703 aa24.25■■□□□ 1.47
TMEM42-201ENST00000302392 MPRIPQ6WCQ1 1025 aa24.25■■□□□ 1.47
TMEM42-201ENST00000302392 DNAJC5GQ8N7S2 189 aa24.25■■□□□ 1.47
TMEM42-201ENST00000302392 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
TMEM42-201ENST00000302392 SIN3AQ96ST3 1273 aa24.24■■□□□ 1.47
TMEM42-201ENST00000302392 PXDNLA1KZ92 1463 aa24.24■■□□□ 1.47
TMEM42-201ENST00000302392 SMARCC1Q92922 1105 aaPredicted RBP24.23■■□□□ 1.47
TMEM42-201ENST00000302392 CARD11Q9BXL7 1154 aa24.23■■□□□ 1.47
TMEM42-201ENST00000302392 PKD1L3Q7Z443 1732 aa24.23■■□□□ 1.47
TMEM42-201ENST00000302392 N4BP2Q86UW6 1770 aaPredicted RBP24.23■■□□□ 1.47
TMEM42-201ENST00000302392 MAP2P11137 1827 aaKnown RBP24.23■■□□□ 1.47
TMEM42-201ENST00000302392 SSFA2P28290 1259 aa24.22■■□□□ 1.47
TMEM42-201ENST00000302392 SMIM5Q71RC9 77 aa24.22■■□□□ 1.47
TMEM42-201ENST00000302392 RRS1Q15050 365 aaKnown RBP24.2■■□□□ 1.46
TMEM42-201ENST00000302392 NEUROD1Q13562 356 aa24.19■■□□□ 1.46
TMEM42-201ENST00000302392 PUS7Q96PZ0 661 aaKnown RBP24.19■■□□□ 1.46
TMEM42-201ENST00000302392 NMRK2Q9NPI5 230 aa24.17■■□□□ 1.46
TMEM42-201ENST00000302392 CYP27B1O15528 508 aa24.16■■□□□ 1.46
TMEM42-201ENST00000302392 LINC00116Q8NCU8 138 aa24.16■■□□□ 1.46
TMEM42-201ENST00000302392 BRCA1P38398 1863 aaKnown RBP24.15■■□□□ 1.46
TMEM42-201ENST00000302392 BCS1LQ9Y276 419 aa24.15■■□□□ 1.46
TMEM42-201ENST00000302392 MMP10P09238 476 aa24.14■■□□□ 1.45
TMEM42-201ENST00000302392 COL13A1Q5TAT6 717 aaPredicted RBP24.14■■□□□ 1.45
TMEM42-201ENST00000302392 C10orf71Q711Q0 1435 aa24.14■■□□□ 1.45
TMEM42-201ENST00000302392 RBM46Q8TBY0 533 aaKnown RBP24.14■■□□□ 1.45
TMEM42-201ENST00000302392 KLRG1Q96E93 195 aa24.14■■□□□ 1.45
TMEM42-201ENST00000302392 INSRP06213 1382 aa24.14■■□□□ 1.45
TMEM42-201ENST00000302392 KIF20BQ96Q89 1820 aa24.13■■□□□ 1.45
TMEM42-201ENST00000302392 LOC102724428A0A0B4J2F2 783 aa24.13■■□□□ 1.45
TMEM42-201ENST00000302392 GNPATO15228 680 aa24.13■■□□□ 1.45
TMEM42-201ENST00000302392 CAPN15O75808 1086 aa24.13■■□□□ 1.45
TMEM42-201ENST00000302392 SIK1P57059 783 aa24.13■■□□□ 1.45
TMEM42-201ENST00000302392 PIGBQ92521 554 aa24.13■■□□□ 1.45
TMEM42-201ENST00000302392 FLT4P35916 1363 aa24.12■■□□□ 1.45
TMEM42-201ENST00000302392 PLEKHG2Q9H7P9 1386 aa24.12■■□□□ 1.45
TMEM42-201ENST00000302392 HTRA3P83110 453 aa24.11■■□□□ 1.45
TMEM42-201ENST00000302392 C16orf71Q8IYS4 520 aaPredicted RBP24.11■■□□□ 1.45
TMEM42-201ENST00000302392 ARFGEF1Q9Y6D6 1849 aa24.11■■□□□ 1.45
TMEM42-201ENST00000302392 C4AP0C0L4 1744 aa24.1■■□□□ 1.45
TMEM42-201ENST00000302392 TGFB2P61812 414 aa24.1■■□□□ 1.45
TMEM42-201ENST00000302392 ARHGAP27Q6ZUM4 889 aa24.1■■□□□ 1.45
TMEM42-201ENST00000302392 JMYQ8N9B5 988 aa24.1■■□□□ 1.45
TMEM42-201ENST00000302392 HSP90AB2PQ58FF8 381 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms