RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 DDX17Q92841 729 aaKnown RBP17.19■□□□□ 0.34
SDC2-201ENST00000302190 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
SDC2-201ENST00000302190 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
SDC2-201ENST00000302190 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
SDC2-201ENST00000302190 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
SDC2-201ENST00000302190 ZNF330Q9Y3S2 320 aaPredicted RBP17.19■□□□□ 0.34
SDC2-201ENST00000302190 LAMC1P11047 1609 aa17.19■□□□□ 0.34
SDC2-201ENST00000302190 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
SDC2-201ENST00000302190 MYOM1P52179 1685 aa17.19■□□□□ 0.34
SDC2-201ENST00000302190 KIAA1210Q9ULL0 1709 aa17.19■□□□□ 0.34
SDC2-201ENST00000302190 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
SDC2-201ENST00000302190 SKOR2Q2VWA4 1001 aaPredicted RBP17.18■□□□□ 0.34
SDC2-201ENST00000302190 ATAD2Q6PL18 1390 aa17.18■□□□□ 0.34
SDC2-201ENST00000302190 KDM5AP29375 1690 aaKnown RBP17.18■□□□□ 0.34
SDC2-201ENST00000302190 SETBP1Q9Y6X0 1596 aa17.18■□□□□ 0.34
SDC2-201ENST00000302190 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
SDC2-201ENST00000302190 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
SDC2-201ENST00000302190 NEURL4Q96JN8 1562 aa17.18■□□□□ 0.34
SDC2-201ENST00000302190 C8orf58Q8NAV2 365 aa17.17■□□□□ 0.34
SDC2-201ENST00000302190 UPF3BQ9BZI7 483 aaKnown RBP17.17■□□□□ 0.34
SDC2-201ENST00000302190 NLRP6P59044 892 aa17.17■□□□□ 0.34
SDC2-201ENST00000302190 FAM13BQ9NYF5 915 aa17.17■□□□□ 0.34
SDC2-201ENST00000302190 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
SDC2-201ENST00000302190 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
SDC2-201ENST00000302190 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
SDC2-201ENST00000302190 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
SDC2-201ENST00000302190 POLR3AO14802 1390 aaPredicted RBP17.17■□□□□ 0.34
SDC2-201ENST00000302190 PROSER2Q86WR7 435 aaPredicted RBP17.16■□□□□ 0.34
SDC2-201ENST00000302190 ADAMTSL3P82987 1691 aa17.16■□□□□ 0.34
SDC2-201ENST00000302190 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
SDC2-201ENST00000302190 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
SDC2-201ENST00000302190 DRC7Q8IY82 874 aa17.15■□□□□ 0.34
SDC2-201ENST00000302190 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
SDC2-201ENST00000302190 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
SDC2-201ENST00000302190 ESCO1Q5FWF5 840 aa17.14■□□□□ 0.34
SDC2-201ENST00000302190 CCDC61Q9Y6R9 512 aa17.14■□□□□ 0.34
SDC2-201ENST00000302190 ESPNB1AK53 854 aa17.14■□□□□ 0.33
SDC2-201ENST00000302190 SURF6O75683 361 aaKnown RBP17.14■□□□□ 0.33
SDC2-201ENST00000302190 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
SDC2-201ENST00000302190 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
SDC2-201ENST00000302190 DTNBO60941 627 aa17.13■□□□□ 0.33
SDC2-201ENST00000302190 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
SDC2-201ENST00000302190 ACEP12821 1306 aa17.13■□□□□ 0.33
SDC2-201ENST00000302190 NUCB2P80303 420 aa17.13■□□□□ 0.33
SDC2-201ENST00000302190 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
SDC2-201ENST00000302190 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
SDC2-201ENST00000302190 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
SDC2-201ENST00000302190 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
SDC2-201ENST00000302190 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
SDC2-201ENST00000302190 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
SDC2-201ENST00000302190 FOXO3O43524 673 aa17.12■□□□□ 0.33
SDC2-201ENST00000302190 PTMSP20962 102 aa17.12■□□□□ 0.33
SDC2-201ENST00000302190 NUCB1Q02818 461 aa17.11■□□□□ 0.33
SDC2-201ENST00000302190 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
SDC2-201ENST00000302190 GDPD2Q9HCC8 539 aa17.11■□□□□ 0.33
SDC2-201ENST00000302190 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
SDC2-201ENST00000302190 TEFQ10587 303 aa17.1■□□□□ 0.33
SDC2-201ENST00000302190 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
SDC2-201ENST00000302190 RABEP1Q15276 862 aa17.1■□□□□ 0.33
SDC2-201ENST00000302190 MEIS3Q99687 375 aa17.1■□□□□ 0.33
SDC2-201ENST00000302190 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
SDC2-201ENST00000302190 SBNO2Q9Y2G9 1366 aa17.09■□□□□ 0.33
SDC2-201ENST00000302190 FOSBP53539 338 aa17.09■□□□□ 0.33
SDC2-201ENST00000302190 HSP90AB2PQ58FF8 381 aa17.09■□□□□ 0.33
SDC2-201ENST00000302190 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
SDC2-201ENST00000302190 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
SDC2-201ENST00000302190 UBTFL1P0CB47 393 aaPredicted RBP17.09■□□□□ 0.33
SDC2-201ENST00000302190 KIAA2012Q0VF49 1180 aa17.09■□□□□ 0.33
SDC2-201ENST00000302190 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
SDC2-201ENST00000302190 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
SDC2-201ENST00000302190 VAMP4O75379 141 aa17.08■□□□□ 0.33
SDC2-201ENST00000302190 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.33
SDC2-201ENST00000302190 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.32
SDC2-201ENST00000302190 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.32
SDC2-201ENST00000302190 SMC5Q8IY18 1101 aa17.08■□□□□ 0.32
SDC2-201ENST00000302190 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.32
SDC2-201ENST00000302190 ALDH1L2Q3SY69 923 aa17.07■□□□□ 0.32
SDC2-201ENST00000302190 SYAP1Q96A49 352 aaPredicted RBP17.07■□□□□ 0.32
SDC2-201ENST00000302190 ZNF335Q9H4Z2 1342 aaPredicted RBP17.07■□□□□ 0.32
SDC2-201ENST00000302190 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
SDC2-201ENST00000302190 ARHGAP23Q9P227 1491 aa17.07■□□□□ 0.32
SDC2-201ENST00000302190 SYCE3A1L190 88 aa17.07■□□□□ 0.32
SDC2-201ENST00000302190 FIBPO43427 364 aa17.07■□□□□ 0.32
SDC2-201ENST00000302190 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
SDC2-201ENST00000302190 ERC2O15083 957 aa17.06■□□□□ 0.32
SDC2-201ENST00000302190 GNAI2P04899 355 aa17.06■□□□□ 0.32
SDC2-201ENST00000302190 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
SDC2-201ENST00000302190 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
SDC2-201ENST00000302190 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
SDC2-201ENST00000302190 USP19O94966 1318 aa17.06■□□□□ 0.32
SDC2-201ENST00000302190 SLIT1O75093 1534 aa17.05■□□□□ 0.32
SDC2-201ENST00000302190 ZRSR1Q15695 479 aaKnown RBP17.05■□□□□ 0.32
SDC2-201ENST00000302190 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
SDC2-201ENST00000302190 ANXA1P04083 346 aa17.05■□□□□ 0.32
SDC2-201ENST00000302190 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
SDC2-201ENST00000302190 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
SDC2-201ENST00000302190 MRPL50Q8N5N7 158 aaKnown RBP17.04■□□□□ 0.32
SDC2-201ENST00000302190 FBXW7Q969H0 707 aa17.04■□□□□ 0.32
SDC2-201ENST00000302190 SDSP20132 328 aa17.04■□□□□ 0.32
SDC2-201ENST00000302190 CLCN1P35523 988 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms