RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 SLC15A2Q16348 729 aa25.13■■□□□ 1.61
TMEM88-201ENST00000301599 PANK3Q9H999 370 aa25.13■■□□□ 1.61
TMEM88-201ENST00000301599 PRIM1P49642 420 aaKnown RBP25.12■■□□□ 1.61
TMEM88-201ENST00000301599 NHSQ6T4R5 1651 aa25.12■■□□□ 1.61
TMEM88-201ENST00000301599 KAT6BQ8WYB5 2073 aa25.12■■□□□ 1.61
TMEM88-201ENST00000301599 SYTL4Q96C24 671 aaPredicted RBP25.11■■□□□ 1.61
TMEM88-201ENST00000301599 WASHC2AQ641Q2 1341 aa25.11■■□□□ 1.61
TMEM88-201ENST00000301599 RGPD2P0DJD1 1756 aa25.09■■□□□ 1.61
TMEM88-201ENST00000301599 MEGF6O75095 1541 aa25.09■■□□□ 1.61
TMEM88-201ENST00000301599 POLKQ9UBT6 870 aa25.09■■□□□ 1.61
TMEM88-201ENST00000301599 PPP1R1BQ9UD71 204 aaPredicted RBP25.09■■□□□ 1.61
TMEM88-201ENST00000301599 SLC27A3Q5K4L6 730 aa25.07■■□□□ 1.6
TMEM88-201ENST00000301599 TNNT2P45379 298 aaPredicted RBP25.06■■□□□ 1.6
TMEM88-201ENST00000301599 PDGFDQ9GZP0 370 aaPredicted RBP25.05■■□□□ 1.6
TMEM88-201ENST00000301599 LRRC4BQ9NT99 713 aa25.05■■□□□ 1.6
TMEM88-201ENST00000301599 PCDH11XQ9BZA7 1347 aa25.04■■□□□ 1.6
TMEM88-201ENST00000301599 PCDH11YQ9BZA8 1340 aa25.04■■□□□ 1.6
TMEM88-201ENST00000301599 ZBTB7AO95365 584 aa25.03■■□□□ 1.6
TMEM88-201ENST00000301599 BTAF1O14981 1849 aa25.02■■□□□ 1.6
TMEM88-201ENST00000301599 EYA1Q99502 592 aa25.02■■□□□ 1.6
TMEM88-201ENST00000301599 ATF5Q9Y2D1 282 aaPredicted RBP25.01■■□□□ 1.59
TMEM88-201ENST00000301599 KNSTRNQ9Y448 316 aa25.01■■□□□ 1.59
TMEM88-201ENST00000301599 SPG7Q9UQ90 795 aa25■■□□□ 1.59
TMEM88-201ENST00000301599 CYP27B1O15528 508 aa24.99■■□□□ 1.59
TMEM88-201ENST00000301599 NSD2O96028 1365 aa24.99■■□□□ 1.59
TMEM88-201ENST00000301599 MAP2P11137 1827 aaKnown RBP24.99■■□□□ 1.59
TMEM88-201ENST00000301599 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
TMEM88-201ENST00000301599 MTFR1LQ9H019 292 aa24.98■■□□□ 1.59
TMEM88-201ENST00000301599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.98■■□□□ 1.59
TMEM88-201ENST00000301599 EIF4A2Q14240 407 aaKnown RBP24.97■■□□□ 1.59
TMEM88-201ENST00000301599 ZNF827Q17R98 1081 aa24.97■■□□□ 1.59
TMEM88-201ENST00000301599 AKT1S1Q96B36 256 aa24.97■■□□□ 1.59
TMEM88-201ENST00000301599 NCAPD2Q15021 1401 aa24.95■■□□□ 1.59
TMEM88-201ENST00000301599 SHANK3Q9BYB0 1731 aa24.95■■□□□ 1.59
TMEM88-201ENST00000301599 HMGB2P26583 209 aaKnown RBP24.95■■□□□ 1.58
TMEM88-201ENST00000301599 PTGER2P43116 358 aa24.95■■□□□ 1.58
TMEM88-201ENST00000301599 KCNQ4P56696 695 aa24.95■■□□□ 1.58
TMEM88-201ENST00000301599 CASZ1Q86V15 1759 aa24.95■■□□□ 1.58
TMEM88-201ENST00000301599 NKX1-1Q15270 411 aaPredicted RBP24.94■■□□□ 1.58
TMEM88-201ENST00000301599 MPRIPQ6WCQ1 1025 aa24.94■■□□□ 1.58
TMEM88-201ENST00000301599 CCNL1Q9UK58 526 aaPredicted RBP24.94■■□□□ 1.58
TMEM88-201ENST00000301599 KIF7Q2M1P5 1343 aa24.93■■□□□ 1.58
TMEM88-201ENST00000301599 DCAF8L1A6NGE4 600 aa24.93■■□□□ 1.58
TMEM88-201ENST00000301599 TFCP2L1Q9NZI6 479 aa24.93■■□□□ 1.58
TMEM88-201ENST00000301599 ANKRD26Q9UPS8 1709 aa24.92■■□□□ 1.58
TMEM88-201ENST00000301599 SLC16A10Q8TF71 515 aa24.92■■□□□ 1.58
TMEM88-201ENST00000301599 DOT1LQ8TEK3 1739 aa24.92■■□□□ 1.58
TMEM88-201ENST00000301599 IFNL2Q8IZJ0 200 aa24.9■■□□□ 1.58
TMEM88-201ENST00000301599 SMARCC1Q92922 1105 aaPredicted RBP24.9■■□□□ 1.58
TMEM88-201ENST00000301599 PAPPAQ13219 1627 aa24.9■■□□□ 1.58
TMEM88-201ENST00000301599 SGIP1Q9BQI5 828 aa24.88■■□□□ 1.57
TMEM88-201ENST00000301599 AMER1Q5JTC6 1135 aaPredicted RBP24.87■■□□□ 1.57
TMEM88-201ENST00000301599 PIGBQ92521 554 aa24.87■■□□□ 1.57
TMEM88-201ENST00000301599 IGSF1Q8N6C5 1336 aa24.86■■□□□ 1.57
TMEM88-201ENST00000301599 PHKG2P15735 406 aa24.86■■□□□ 1.57
TMEM88-201ENST00000301599 PNPLA7Q6ZV29 1317 aa24.86■■□□□ 1.57
TMEM88-201ENST00000301599 PLEKHG2Q9H7P9 1386 aa24.85■■□□□ 1.57
TMEM88-201ENST00000301599 ARXQ96QS3 562 aa24.85■■□□□ 1.57
TMEM88-201ENST00000301599 LY75O60449 1722 aa24.84■■□□□ 1.57
TMEM88-201ENST00000301599 PALLDQ8WX93 1383 aa24.84■■□□□ 1.57
TMEM88-201ENST00000301599 PER1O15534 1290 aaPredicted RBP24.84■■□□□ 1.57
TMEM88-201ENST00000301599 PLEKHO1Q53GL0 409 aaPredicted RBP24.84■■□□□ 1.57
TMEM88-201ENST00000301599 PKD1L3Q7Z443 1732 aa24.83■■□□□ 1.57
TMEM88-201ENST00000301599 SYT17Q9BSW7 474 aa24.83■■□□□ 1.57
TMEM88-201ENST00000301599 FHDC1Q9C0D6 1143 aaPredicted RBP24.83■■□□□ 1.57
TMEM88-201ENST00000301599 TMOD3Q9NYL9 352 aa24.83■■□□□ 1.57
TMEM88-201ENST00000301599 AMOTQ4VCS5 1084 aa24.82■■□□□ 1.56
TMEM88-201ENST00000301599 POLD1P28340 1107 aa24.81■■□□□ 1.56
TMEM88-201ENST00000301599 MSH5O43196 834 aa24.8■■□□□ 1.56
TMEM88-201ENST00000301599 HSP90AB1P08238 724 aaKnown RBP24.8■■□□□ 1.56
TMEM88-201ENST00000301599 COL23A1Q86Y22 540 aaPredicted RBP24.79■■□□□ 1.56
TMEM88-201ENST00000301599 FLAD1Q8NFF5 587 aa24.79■■□□□ 1.56
TMEM88-201ENST00000301599 ERVV-2B6SEH9 535 aa24.78■■□□□ 1.56
TMEM88-201ENST00000301599 IL13P35225 146 aa24.78■■□□□ 1.56
TMEM88-201ENST00000301599 MTHFSP49914 203 aa24.78■■□□□ 1.56
TMEM88-201ENST00000301599 CC2D1BQ5T0F9 858 aaKnown RBP24.77■■□□□ 1.56
TMEM88-201ENST00000301599 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
TMEM88-201ENST00000301599 DCAF5Q96JK2 942 aa24.77■■□□□ 1.56
TMEM88-201ENST00000301599 ZNF530Q6P9A1 599 aaPredicted RBP24.76■■□□□ 1.55
TMEM88-201ENST00000301599 AEBP1Q8IUX7 1158 aa24.76■■□□□ 1.55
TMEM88-201ENST00000301599 ASAP1Q9ULH1 1129 aa24.76■■□□□ 1.55
TMEM88-201ENST00000301599 LOC102724428A0A0B4J2F2 783 aa24.75■■□□□ 1.55
TMEM88-201ENST00000301599 SIK1P57059 783 aa24.75■■□□□ 1.55
TMEM88-201ENST00000301599 QSER1Q2KHR3 1735 aa24.75■■□□□ 1.55
TMEM88-201ENST00000301599 ITGB4P16144 1822 aa24.75■■□□□ 1.55
TMEM88-201ENST00000301599 TOGARAM1Q9Y4F4 1720 aa24.73■■□□□ 1.55
TMEM88-201ENST00000301599 C1orf141Q5JVX7 400 aa24.73■■□□□ 1.55
TMEM88-201ENST00000301599 AK7Q96M32 723 aa24.73■■□□□ 1.55
TMEM88-201ENST00000301599 ATG3Q9NT62 314 aa24.73■■□□□ 1.55
TMEM88-201ENST00000301599 MAP3K5Q99683 1374 aa24.72■■□□□ 1.55
TMEM88-201ENST00000301599 YY1P25490 414 aa24.71■■□□□ 1.55
TMEM88-201ENST00000301599 ATP6V1AP38606 617 aa24.71■■□□□ 1.55
TMEM88-201ENST00000301599 CABP4P57796 275 aa24.71■■□□□ 1.55
TMEM88-201ENST00000301599 KDRP35968 1356 aa24.69■■□□□ 1.54
TMEM88-201ENST00000301599 NPC1L1Q9UHC9 1359 aa24.69■■□□□ 1.54
TMEM88-201ENST00000301599 DIAPH1O60610 1272 aaKnown RBP24.69■■□□□ 1.54
TMEM88-201ENST00000301599 KLHL34Q8N239 644 aa24.69■■□□□ 1.54
TMEM88-201ENST00000301599 LINC00116Q8NCU8 138 aa24.68■■□□□ 1.54
TMEM88-201ENST00000301599 C5P01031 1676 aa24.67■■□□□ 1.54
TMEM88-201ENST00000301599 CNGB1Q14028 1251 aaPredicted RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms