RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 WASHC2AQ641Q2 1341 aa7.59□□□□□ -1.19
PATL1-201ENST00000300146 CCDC7Q96M83 1385 aa7.59□□□□□ -1.19
PATL1-201ENST00000300146 PIP4K2AP48426 406 aaPredicted RBP7.59□□□□□ -1.19
PATL1-201ENST00000300146 ZNF827Q17R98 1081 aa7.59□□□□□ -1.19
PATL1-201ENST00000300146 NPM2Q86SE8 214 aaKnown RBP7.59□□□□□ -1.19
PATL1-201ENST00000300146 NFATC2IPQ8NCF5 419 aa7.59□□□□□ -1.19
PATL1-201ENST00000300146 ZNF526Q8TF50 670 aaPredicted RBP7.59□□□□□ -1.19
PATL1-201ENST00000300146 KNDC1Q76NI1 1749 aa7.59□□□□□ -1.19
PATL1-201ENST00000300146 BICDL1Q6ZP65 573 aa7.59□□□□□ -1.19
PATL1-201ENST00000300146 FAM177BA6PVY3 158 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 DIAPH1O60610 1272 aaKnown RBP7.58□□□□□ -1.2
PATL1-201ENST00000300146 PIGBQ92521 554 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 FLT4P35916 1363 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 CDK12Q9NYV4 1490 aaPredicted RBP7.58□□□□□ -1.2
PATL1-201ENST00000300146 GNPATO15228 680 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 DCTN1Q14203 1278 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 PLEKHO1Q53GL0 409 aaPredicted RBP7.58□□□□□ -1.2
PATL1-201ENST00000300146 LAS1LQ9Y4W2 734 aaKnown RBP7.58□□□□□ -1.2
PATL1-201ENST00000300146 CD163L1Q9NR16 1453 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 IFNL2Q8IZJ0 200 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 MIS18AQ9NYP9 233 aa7.58□□□□□ -1.2
PATL1-201ENST00000300146 BRD4O60885 1362 aaPredicted RBP7.58□□□□□ -1.2
PATL1-201ENST00000300146 CCDC24Q8N4L8 307 aa7.57□□□□□ -1.2
PATL1-201ENST00000300146 FHDC1Q9C0D6 1143 aaPredicted RBP7.57□□□□□ -1.2
PATL1-201ENST00000300146 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
PATL1-201ENST00000300146 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
PATL1-201ENST00000300146 NEFMP07197 916 aa7.57□□□□□ -1.2
PATL1-201ENST00000300146 RRP7AQ9Y3A4 280 aaKnown RBP7.57□□□□□ -1.2
PATL1-201ENST00000300146 KIAA1210Q9ULL0 1709 aa7.57□□□□□ -1.2
PATL1-201ENST00000300146 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
PATL1-201ENST00000300146 ADGRB2O60241 1585 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 POLD1P28340 1107 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 CFAP53Q96M91 514 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 CCDC146Q8IYE0 955 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 NECTIN2Q92692 538 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 USP31Q70CQ4 1352 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 PLSCR1O15162 318 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 TEFQ10587 303 aa7.56□□□□□ -1.2
PATL1-201ENST00000300146 PCDH11XQ9BZA7 1347 aa7.55□□□□□ -1.2
PATL1-201ENST00000300146 PCDH11YQ9BZA8 1340 aa7.55□□□□□ -1.2
PATL1-201ENST00000300146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.55□□□□□ -1.2
PATL1-201ENST00000300146 PRKAR2BP31323 418 aa7.55□□□□□ -1.2
PATL1-201ENST00000300146 PUS7Q96PZ0 661 aaKnown RBP7.55□□□□□ -1.2
PATL1-201ENST00000300146 LOC102724428A0A0B4J2F2 783 aa7.55□□□□□ -1.2
PATL1-201ENST00000300146 SIK1P57059 783 aa7.55□□□□□ -1.2
PATL1-201ENST00000300146 AMER1Q5JTC6 1135 aaPredicted RBP7.55□□□□□ -1.2
PATL1-201ENST00000300146 THUMPD2Q9BTF0 503 aaKnown RBP7.55□□□□□ -1.2
PATL1-201ENST00000300146 USP54Q70EL1 1684 aa7.55□□□□□ -1.2
PATL1-201ENST00000300146 YY1P25490 414 aa7.55□□□□□ -1.2
PATL1-201ENST00000300146 NUDCQ9Y266 331 aa7.54□□□□□ -1.2
PATL1-201ENST00000300146 PHKG2P15735 406 aa7.54□□□□□ -1.2
PATL1-201ENST00000300146 MCM10Q7L590 875 aa7.54□□□□□ -1.2
PATL1-201ENST00000300146 COL23A1Q86Y22 540 aaPredicted RBP7.54□□□□□ -1.2
PATL1-201ENST00000300146 RTF1Q92541 710 aaKnown RBP7.54□□□□□ -1.2
PATL1-201ENST00000300146 COL14A1Q05707 1796 aaKnown RBP7.54□□□□□ -1.2
PATL1-201ENST00000300146 MEGF6O75095 1541 aa7.54□□□□□ -1.2
PATL1-201ENST00000300146 INSRP06213 1382 aa7.54□□□□□ -1.2
PATL1-201ENST00000300146 NINLQ9Y2I6 1382 aa7.54□□□□□ -1.2
PATL1-201ENST00000300146 PLCH1Q4KWH8 1693 aa7.54□□□□□ -1.2
PATL1-201ENST00000300146 BRWD3Q6RI45 1802 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 TRPM3Q9HCF6 1732 aaPredicted RBP7.53□□□□□ -1.2
PATL1-201ENST00000300146 MTHFSDQ2M296 383 aaKnown RBP7.53□□□□□ -1.2
PATL1-201ENST00000300146 TTC5Q8N0Z6 440 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 PALLDQ8WX93 1383 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 SYT17Q9BSW7 474 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 PIK3C2AO00443 1686 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 ALS2Q96Q42 1657 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 RFC4P35249 363 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 AMIGO3Q86WK7 504 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 NRKQ7Z2Y5 1582 aa7.53□□□□□ -1.2
PATL1-201ENST00000300146 KCNA4P22459 653 aa7.52□□□□□ -1.2
PATL1-201ENST00000300146 PHACTR3Q96KR7 559 aa7.52□□□□□ -1.2
PATL1-201ENST00000300146 SRP68Q9UHB9 627 aaKnown RBP7.52□□□□□ -1.2
PATL1-201ENST00000300146 COL22A1Q8NFW1 1626 aaPredicted RBP7.52□□□□□ -1.2
PATL1-201ENST00000300146 ITSN1Q15811 1721 aa7.52□□□□□ -1.21
PATL1-201ENST00000300146 TCERG1O14776 1098 aaKnown RBP7.52□□□□□ -1.21
PATL1-201ENST00000300146 DNAJC10Q8IXB1 793 aa7.52□□□□□ -1.21
PATL1-201ENST00000300146 NLGN2Q8NFZ4 835 aa7.52□□□□□ -1.21
PATL1-201ENST00000300146 ITPK1Q13572 414 aa7.52□□□□□ -1.21
PATL1-201ENST00000300146 ATG3Q9NT62 314 aa7.52□□□□□ -1.21
PATL1-201ENST00000300146 RTCBQ9Y3I0 505 aaKnown RBP7.52□□□□□ -1.21
PATL1-201ENST00000300146 IL13P35225 146 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 MTFR1LQ9H019 292 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 TBC1D2BQ9UPU7 963 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 KCNQ3O43525 872 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 EIF2S2P20042 333 aaKnown RBP7.51□□□□□ -1.21
PATL1-201ENST00000300146 LINC00116Q8NCU8 138 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
PATL1-201ENST00000300146 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
PATL1-201ENST00000300146 PER1O15534 1290 aaPredicted RBP7.51□□□□□ -1.21
PATL1-201ENST00000300146 PPP2R1AP30153 589 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 TRAPPC3LQ5T215 181 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 BCS1LQ9Y276 419 aa7.51□□□□□ -1.21
PATL1-201ENST00000300146 MAPK8IP3Q9UPT6 1336 aa7.5□□□□□ -1.21
PATL1-201ENST00000300146 MMP10P09238 476 aa7.5□□□□□ -1.21
PATL1-201ENST00000300146 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
PATL1-201ENST00000300146 TNS2Q63HR2 1409 aa7.5□□□□□ -1.21
PATL1-201ENST00000300146 RGPD5Q99666 1765 aa7.5□□□□□ -1.21
PATL1-201ENST00000300146 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
PATL1-201ENST00000300146 WDR43Q15061 677 aaKnown RBP eCLIP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms