RNA–Protein interactions for RNA: ENST00000299572.9

CENPN-201, Transcript of centromere protein N, humanhuman

TSL 1 (best) BASIC

Gene CENPN, Length 1,398 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-201ENST00000299572 KIF24Q5T7B8 1368 aa28.28■■■□□ 2.12
CENPN-201ENST00000299572 ZBTB7AO95365 584 aa28.27■■■□□ 2.12
CENPN-201ENST00000299572 ZCRB1Q8TBF4 217 aaKnown RBP28.27■■■□□ 2.12
CENPN-201ENST00000299572 INSRP06213 1382 aa28.27■■■□□ 2.12
CENPN-201ENST00000299572 HSP90AB2PQ58FF8 381 aa28.24■■■□□ 2.11
CENPN-201ENST00000299572 USHBP1Q8N6Y0 703 aa28.24■■■□□ 2.11
CENPN-201ENST00000299572 CGNL1Q0VF96 1302 aa28.24■■■□□ 2.11
CENPN-201ENST00000299572 SYTL4Q96C24 671 aaPredicted RBP28.24■■■□□ 2.11
CENPN-201ENST00000299572 RAPGEF4Q8WZA2 1011 aa28.23■■■□□ 2.11
CENPN-201ENST00000299572 ANKRD26Q9UPS8 1709 aa28.21■■■□□ 2.11
CENPN-201ENST00000299572 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
CENPN-201ENST00000299572 LRRC4BQ9NT99 713 aa28.21■■■□□ 2.11
CENPN-201ENST00000299572 ATF5Q9Y2D1 282 aaPredicted RBP28.21■■■□□ 2.11
CENPN-201ENST00000299572 EMILIN1Q9Y6C2 1016 aa28.2■■■□□ 2.1
CENPN-201ENST00000299572 TATP17735 454 aaPredicted RBP28.19■■■□□ 2.1
CENPN-201ENST00000299572 PTGER2P43116 358 aa28.19■■■□□ 2.1
CENPN-201ENST00000299572 ZNF827Q17R98 1081 aa28.19■■■□□ 2.1
CENPN-201ENST00000299572 SLC27A3Q5K4L6 730 aa28.19■■■□□ 2.1
CENPN-201ENST00000299572 MTFR1LQ9H019 292 aa28.19■■■□□ 2.1
CENPN-201ENST00000299572 NSD2O96028 1365 aa28.19■■■□□ 2.1
CENPN-201ENST00000299572 LY75O60449 1722 aa28.18■■■□□ 2.1
CENPN-201ENST00000299572 POLR3GLQ9BT43 218 aa28.18■■■□□ 2.1
CENPN-201ENST00000299572 QSER1Q2KHR3 1735 aa28.16■■■□□ 2.1
CENPN-201ENST00000299572 EIF4G2P78344 907 aaKnown RBP eCLIP28.15■■■□□ 2.1
CENPN-201ENST00000299572 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.1
CENPN-201ENST00000299572 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.1
CENPN-201ENST00000299572 MAP2P11137 1827 aaKnown RBP28.14■■■□□ 2.1
CENPN-201ENST00000299572 DCAF8L1A6NGE4 600 aa28.13■■■□□ 2.09
CENPN-201ENST00000299572 PPM1GO15355 546 aaPredicted RBP28.13■■■□□ 2.09
CENPN-201ENST00000299572 AKT1S1Q96B36 256 aa28.13■■■□□ 2.09
CENPN-201ENST00000299572 HSPA5P11021 654 aaKnown RBP28.11■■■□□ 2.09
CENPN-201ENST00000299572 PKD1L3Q7Z443 1732 aa28.11■■■□□ 2.09
CENPN-201ENST00000299572 NCAPD2Q15021 1401 aa28.11■■■□□ 2.09
CENPN-201ENST00000299572 SGIP1Q9BQI5 828 aa28.11■■■□□ 2.09
CENPN-201ENST00000299572 WASHC2AQ641Q2 1341 aa28.1■■■□□ 2.09
CENPN-201ENST00000299572 TUBGCP6Q96RT7 1819 aa28.1■■■□□ 2.09
CENPN-201ENST00000299572 KCNQ4P56696 695 aa28.09■■■□□ 2.09
CENPN-201ENST00000299572 CCNL1Q9UK58 526 aaPredicted RBP28.08■■■□□ 2.09
CENPN-201ENST00000299572 FHDC1Q9C0D6 1143 aaPredicted RBP28.07■■■□□ 2.08
CENPN-201ENST00000299572 POLKQ9UBT6 870 aa28.06■■■□□ 2.08
CENPN-201ENST00000299572 PNPLA7Q6ZV29 1317 aa28.05■■■□□ 2.08
CENPN-201ENST00000299572 TOGARAM1Q9Y4F4 1720 aa28.05■■■□□ 2.08
CENPN-201ENST00000299572 CYP27B1O15528 508 aa28.05■■■□□ 2.08
CENPN-201ENST00000299572 TFCP2L1Q9NZI6 479 aa28.05■■■□□ 2.08
CENPN-201ENST00000299572 SLC16A10Q8TF71 515 aa28.04■■■□□ 2.08
CENPN-201ENST00000299572 YY1P25490 414 aa28.03■■■□□ 2.08
CENPN-201ENST00000299572 ARXQ96QS3 562 aa28.03■■■□□ 2.08
CENPN-201ENST00000299572 SYT17Q9BSW7 474 aa28.03■■■□□ 2.08
CENPN-201ENST00000299572 ITGB4P16144 1822 aa28.02■■■□□ 2.08
CENPN-201ENST00000299572 TNNT2P45379 298 aaPredicted RBP28.02■■■□□ 2.08
CENPN-201ENST00000299572 C5P01031 1676 aa28.01■■■□□ 2.08
CENPN-201ENST00000299572 EYA1Q99502 592 aa28.01■■■□□ 2.07
CENPN-201ENST00000299572 PANK3Q9H999 370 aa28.01■■■□□ 2.07
CENPN-201ENST00000299572 COL24A1Q17RW2 1714 aa28.01■■■□□ 2.07
CENPN-201ENST00000299572 SPG7Q9UQ90 795 aa28■■■□□ 2.07
CENPN-201ENST00000299572 MPRIPQ6WCQ1 1025 aa27.99■■■□□ 2.07
CENPN-201ENST00000299572 PALLDQ8WX93 1383 aa27.99■■■□□ 2.07
CENPN-201ENST00000299572 MAP3K5Q99683 1374 aa27.99■■■□□ 2.07
CENPN-201ENST00000299572 POLD1P28340 1107 aa27.97■■■□□ 2.07
CENPN-201ENST00000299572 EIF4A2Q14240 407 aaKnown RBP27.97■■■□□ 2.07
CENPN-201ENST00000299572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.97■■■□□ 2.07
CENPN-201ENST00000299572 TAF1LQ8IZX4 1826 aa27.97■■■□□ 2.07
CENPN-201ENST00000299572 NKX1-1Q15270 411 aaPredicted RBP27.96■■■□□ 2.07
CENPN-201ENST00000299572 HMGB2P26583 209 aaKnown RBP27.95■■■□□ 2.06
CENPN-201ENST00000299572 SMARCC1Q92922 1105 aaPredicted RBP27.94■■■□□ 2.06
CENPN-201ENST00000299572 PLEKHG2Q9H7P9 1386 aa27.92■■■□□ 2.06
CENPN-201ENST00000299572 MSH5O43196 834 aa27.91■■■□□ 2.06
CENPN-201ENST00000299572 PIGBQ92521 554 aa27.91■■■□□ 2.06
CENPN-201ENST00000299572 COL23A1Q86Y22 540 aaPredicted RBP27.9■■■□□ 2.06
CENPN-201ENST00000299572 IGSF1Q8N6C5 1336 aa27.9■■■□□ 2.06
CENPN-201ENST00000299572 C4BP0C0L5 1744 aa27.89■■■□□ 2.06
CENPN-201ENST00000299572 IFNL2Q8IZJ0 200 aa27.89■■■□□ 2.06
CENPN-201ENST00000299572 KLHL34Q8N239 644 aa27.89■■■□□ 2.06
CENPN-201ENST00000299572 PHKG2P15735 406 aa27.88■■■□□ 2.05
CENPN-201ENST00000299572 MORC1Q86VD1 984 aa27.88■■■□□ 2.05
CENPN-201ENST00000299572 TMOD3Q9NYL9 352 aa27.87■■■□□ 2.05
CENPN-201ENST00000299572 KNSTRNQ9Y448 316 aa27.87■■■□□ 2.05
CENPN-201ENST00000299572 FLAD1Q8NFF5 587 aa27.85■■■□□ 2.05
CENPN-201ENST00000299572 CHD4Q14839 1912 aa27.83■■■□□ 2.05
CENPN-201ENST00000299572 AK7Q96M32 723 aa27.83■■■□□ 2.05
CENPN-201ENST00000299572 UBR3Q6ZT12 1888 aa27.82■■■□□ 2.04
CENPN-201ENST00000299572 MSL1Q68DK7 614 aa27.82■■■□□ 2.04
CENPN-201ENST00000299572 KIF7Q2M1P5 1343 aa27.81■■■□□ 2.04
CENPN-201ENST00000299572 LOC102724428A0A0B4J2F2 783 aa27.81■■■□□ 2.04
CENPN-201ENST00000299572 SIK1P57059 783 aa27.81■■■□□ 2.04
CENPN-201ENST00000299572 ASAP1Q9ULH1 1129 aa27.8■■■□□ 2.04
CENPN-201ENST00000299572 GPR162Q16538 588 aa27.79■■■□□ 2.04
CENPN-201ENST00000299572 PLEKHO1Q53GL0 409 aaPredicted RBP27.79■■■□□ 2.04
CENPN-201ENST00000299572 HSP90AB1P08238 724 aaKnown RBP27.77■■■□□ 2.04
CENPN-201ENST00000299572 NLGN2Q8NFZ4 835 aa27.77■■■□□ 2.04
CENPN-201ENST00000299572 AMOTQ4VCS5 1084 aa27.76■■■□□ 2.03
CENPN-201ENST00000299572 AMER1Q5JTC6 1135 aaPredicted RBP27.76■■■□□ 2.03
CENPN-201ENST00000299572 ZNF530Q6P9A1 599 aaPredicted RBP27.76■■■□□ 2.03
CENPN-201ENST00000299572 LINC00116Q8NCU8 138 aa27.76■■■□□ 2.03
CENPN-201ENST00000299572 DCAF5Q96JK2 942 aa27.76■■■□□ 2.03
CENPN-201ENST00000299572 PHF14O94880 888 aa27.75■■■□□ 2.03
CENPN-201ENST00000299572 AMIGO3Q86WK7 504 aa27.75■■■□□ 2.03
CENPN-201ENST00000299572 AEBP1Q8IUX7 1158 aa27.75■■■□□ 2.03
CENPN-201ENST00000299572 ATG3Q9NT62 314 aa27.75■■■□□ 2.03
CENPN-201ENST00000299572 ERVV-2B6SEH9 535 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms