RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 NCOA1Q15788 1441 aa19.5■□□□□ 0.71
SNAPC4-201ENST00000298532 OFD1O75665 1012 aa19.5■□□□□ 0.71
SNAPC4-201ENST00000298532 ME1P48163 572 aa19.5■□□□□ 0.71
SNAPC4-201ENST00000298532 GPATCH8Q9UKJ3 1502 aaKnown RBP19.5■□□□□ 0.71
SNAPC4-201ENST00000298532 KIF2AO00139 706 aaPredicted RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 SLC4A2P04920 1241 aa19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 RPAP2Q8IXW5 612 aaPredicted RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 NOL10Q9BSC4 688 aaKnown RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 CBFA2T2O43439 604 aa19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 NUTM2BA6NNL0 878 aaPredicted RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 NUTM2EB1AL46 878 aaPredicted RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 MCM5P33992 734 aa19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 NUTM2AQ8IVF1 878 aaPredicted RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 TNPO1Q92973 898 aaKnown RBP19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 SLC12A5Q9H2X9 1139 aa19.49■□□□□ 0.71
SNAPC4-201ENST00000298532 FAM135AQ9P2D6 1515 aa19.48■□□□□ 0.71
SNAPC4-201ENST00000298532 MAP3K11Q16584 847 aa19.48■□□□□ 0.71
SNAPC4-201ENST00000298532 FILIP1Q7Z7B0 1213 aa19.48■□□□□ 0.71
SNAPC4-201ENST00000298532 CABP1Q9NZU7 370 aa19.48■□□□□ 0.71
SNAPC4-201ENST00000298532 CFAP45Q9UL16 551 aa19.48■□□□□ 0.71
SNAPC4-201ENST00000298532 A2MP01023 1474 aa19.48■□□□□ 0.71
SNAPC4-201ENST00000298532 AIMP1Q12904 312 aaKnown RBP19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 SPG7Q9UQ90 795 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 CBX1P83916 185 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 TOM1L2Q6ZVM7 507 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 PPFIBP1Q86W92 1011 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 TMEM57Q8N5G2 664 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 UBXN4Q92575 508 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 STRN4Q9NRL3 753 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 DACH1Q9UI36 760 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 MYO6Q9UM54 1294 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 IDI1Q13907 227 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 CADPS2Q86UW7 1296 aa19.47■□□□□ 0.71
SNAPC4-201ENST00000298532 CEBPAP49715 358 aaPredicted RBP19.46■□□□□ 0.71
SNAPC4-201ENST00000298532 KIAA0754O94854 1291 aa19.46■□□□□ 0.71
SNAPC4-201ENST00000298532 SART3Q15020 963 aaKnown RBP19.46■□□□□ 0.71
SNAPC4-201ENST00000298532 KDM5BQ9UGL1 1544 aa19.46■□□□□ 0.71
SNAPC4-201ENST00000298532 NUP153P49790 1475 aaKnown RBP19.46■□□□□ 0.71
SNAPC4-201ENST00000298532 C11orf95C9JLR9 678 aaPredicted RBP19.46■□□□□ 0.71
SNAPC4-201ENST00000298532 PDRG1Q9NUG6 133 aa19.46■□□□□ 0.71
SNAPC4-201ENST00000298532 ERICH4A6NGS2 130 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 BLOC1S2Q6QNY1 142 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 DNAJC2Q99543 621 aaKnown RBP19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 PRDM10Q9NQV6 1147 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 CLCN1P35523 988 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 BRPF1P55201 1214 aaPredicted RBP19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 CCDC183Q5T5S1 534 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 STK3Q13188 491 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 NKTRP30414 1462 aaKnown RBP19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 SSFA2P28290 1259 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 USP8P40818 1118 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 AMOTL2Q9Y2J4 779 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 CTTNBP2Q8WZ74 1663 aa19.45■□□□□ 0.7
SNAPC4-201ENST00000298532 UPF3BQ9BZI7 483 aaKnown RBP19.44■□□□□ 0.7
SNAPC4-201ENST00000298532 ITSN2Q9NZM3 1697 aa19.44■□□□□ 0.7
SNAPC4-201ENST00000298532 NUDT16Q96DE0 195 aaKnown RBP19.44■□□□□ 0.7
SNAPC4-201ENST00000298532 ZNHIT6Q9NWK9 470 aaKnown RBP19.44■□□□□ 0.7
SNAPC4-201ENST00000298532 ATP2B1P20020 1258 aa19.44■□□□□ 0.7
SNAPC4-201ENST00000298532 FBXO31Q5XUX0 539 aaPredicted RBP19.44■□□□□ 0.7
SNAPC4-201ENST00000298532 MAGEC2Q9UBF1 373 aaPredicted RBP19.44■□□□□ 0.7
SNAPC4-201ENST00000298532 DUOX2Q9NRD8 1548 aa19.43■□□□□ 0.7
SNAPC4-201ENST00000298532 TMCO3Q6UWJ1 677 aa19.43■□□□□ 0.7
SNAPC4-201ENST00000298532 TOM1O60784 492 aa19.43■□□□□ 0.7
SNAPC4-201ENST00000298532 PTPN14Q15678 1187 aa19.43■□□□□ 0.7
SNAPC4-201ENST00000298532 VPS37DQ86XT2 251 aa19.43■□□□□ 0.7
SNAPC4-201ENST00000298532 FAM177A1Q8N128 213 aaPredicted RBP19.43■□□□□ 0.7
SNAPC4-201ENST00000298532 UHRF1BP1LA0JNW5 1464 aa19.43■□□□□ 0.7
SNAPC4-201ENST00000298532 EPS15P42566 896 aa19.42■□□□□ 0.7
SNAPC4-201ENST00000298532 JAKMIP1Q96N16 626 aaKnown RBP19.42■□□□□ 0.7
SNAPC4-201ENST00000298532 DYNC1I1O14576 645 aa19.42■□□□□ 0.7
SNAPC4-201ENST00000298532 TXLNAP40222 546 aa19.41■□□□□ 0.7
SNAPC4-201ENST00000298532 ZMYND15Q9H091 742 aa19.41■□□□□ 0.7
SNAPC4-201ENST00000298532 SMTNL1A8MU46 457 aa19.41■□□□□ 0.7
SNAPC4-201ENST00000298532 CGNQ9P2M7 1197 aaKnown RBP19.41■□□□□ 0.7
SNAPC4-201ENST00000298532 SKIDA1Q1XH10 827 aa19.41■□□□□ 0.7
SNAPC4-201ENST00000298532 CT47A1Q5JQC4 288 aaPredicted RBP19.41■□□□□ 0.7
SNAPC4-201ENST00000298532 KIF18AQ8NI77 898 aa19.41■□□□□ 0.7
SNAPC4-201ENST00000298532 TBC1D32Q96NH3 1257 aa19.4■□□□□ 0.7
SNAPC4-201ENST00000298532 DEF6Q9H4E7 631 aa19.4■□□□□ 0.7
SNAPC4-201ENST00000298532 PHF8Q9UPP1 1060 aa19.4■□□□□ 0.7
SNAPC4-201ENST00000298532 GOLGA6L10A6NI86 522 aa19.4■□□□□ 0.7
SNAPC4-201ENST00000298532 HDGFL1Q5TGJ6 251 aa19.4■□□□□ 0.7
SNAPC4-201ENST00000298532 PRM3Q9NNZ6 103 aa19.4■□□□□ 0.7
SNAPC4-201ENST00000298532 PLEKHH1Q9ULM0 1364 aa19.39■□□□□ 0.7
SNAPC4-201ENST00000298532 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.7
SNAPC4-201ENST00000298532 KRT32Q14532 448 aa19.39■□□□□ 0.69
SNAPC4-201ENST00000298532 KLHL40Q2TBA0 621 aa19.39■□□□□ 0.69
SNAPC4-201ENST00000298532 CALCOCO1Q9P1Z2 691 aa19.39■□□□□ 0.69
SNAPC4-201ENST00000298532 TMPOP42166 694 aaKnown RBP19.39■□□□□ 0.69
SNAPC4-201ENST00000298532 KDM4AO75164 1064 aa19.38■□□□□ 0.69
SNAPC4-201ENST00000298532 FCHSD2O94868 740 aa19.38■□□□□ 0.69
SNAPC4-201ENST00000298532 MSH6P52701 1360 aa19.38■□□□□ 0.69
SNAPC4-201ENST00000298532 MAP4K4O95819 1239 aaPredicted RBP19.38■□□□□ 0.69
SNAPC4-201ENST00000298532 SFPQP23246 707 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNAPC4-201ENST00000298532 USP25Q9UHP3 1055 aa19.37■□□□□ 0.69
SNAPC4-201ENST00000298532 DUSP27Q5VZP5 1158 aa19.37■□□□□ 0.69
SNAPC4-201ENST00000298532 CCDC102AQ96A19 550 aa19.37■□□□□ 0.69
SNAPC4-201ENST00000298532 TCEAL9Q9UHQ7 104 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms