RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 RTL1A6NKG5 1358 aa3.87□□□□□ -1.79
HDX-201ENST00000297977 PLEKHH1Q9ULM0 1364 aa3.87□□□□□ -1.79
HDX-201ENST00000297977 TECPR2O15040 1411 aa3.87□□□□□ -1.79
HDX-201ENST00000297977 SOS2Q07890 1332 aaPredicted RBP3.86□□□□□ -1.79
HDX-201ENST00000297977 KIAA0232Q92628 1395 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 GPATCH3Q96I76 525 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 MYO3AQ8NEV4 1616 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 ELL2O00472 640 aaPredicted RBP3.86□□□□□ -1.79
HDX-201ENST00000297977 GNAI3P08754 354 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 SNRPA1P09661 255 aaKnown RBP3.86□□□□□ -1.79
HDX-201ENST00000297977 KCNJ4P48050 445 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 CASC1Q6TDU7 716 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 DDRGK1Q96HY6 314 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 BABAM1Q9NWV8 329 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 TFCP2L1Q9NZI6 479 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 SLIT1O75093 1534 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 ATP7BP35670 1465 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 TNS3Q68CZ2 1445 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 APBA3O96018 575 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 RFC4P35249 363 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 ZKSCAN2Q63HK3 967 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 SEPT12Q8IYM1 358 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 DIP2AQ14689 1571 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 SOS1Q07889 1333 aaPredicted RBP3.86□□□□□ -1.79
HDX-201ENST00000297977 RAD21O60216 631 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 FOXD4L1Q9NU39 408 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 RTCBQ9Y3I0 505 aaKnown RBP3.86□□□□□ -1.79
HDX-201ENST00000297977 CLTCQ00610 1675 aaKnown RBP3.86□□□□□ -1.79
HDX-201ENST00000297977 VPS72Q15906 364 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 GJD4Q96KN9 370 aaPredicted RBP3.86□□□□□ -1.79
HDX-201ENST00000297977 ZRANB1Q9UGI0 708 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 ADAMTS8Q9UP79 889 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 RICTORQ6R327 1708 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 USP6P35125 1406 aa3.86□□□□□ -1.79
HDX-201ENST00000297977 DBF4Q9UBU7 674 aaPredicted RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 ERVV-2B6SEH9 535 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 TMPOP42166 694 aaKnown RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 EIF4A2Q14240 407 aaKnown RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 EYA1Q99502 592 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 NOL10Q9BSC4 688 aaKnown RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 CCNL1Q9UK58 526 aaPredicted RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 AATKQ6ZMQ8 1374 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 A0A0U1RQG5 324 aaPredicted RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 LARP1Q6PKG0 1096 aaKnown RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 RCAN3Q9UKA8 241 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 FER1L4A9Z1Z3 1794 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 PRR36Q9H6K5 1346 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 PTMAP06454 111 aaKnown RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 TWISTNBQ3B726 338 aaPredicted RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 TMED8Q6PL24 325 aaPredicted RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 DDX17Q92841 729 aaKnown RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 RWDD1Q9H446 243 aaPredicted RBP3.85□□□□□ -1.79
HDX-201ENST00000297977 KIF1BO60333 1816 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 MED14O60244 1454 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 ERBB3P21860 1342 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 VPS37DQ86XT2 251 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 USHBP1Q8N6Y0 703 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 HYPKQ9NX55 129 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 FRMPD1Q5SYB0 1578 aa3.85□□□□□ -1.79
HDX-201ENST00000297977 PPP1R42Q7Z4L9 355 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 BCORL1Q5H9F3 1711 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 DLC1Q96QB1 1528 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 ATP6V1AP38606 617 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 SETQ01105 290 aaPredicted RBP3.84□□□□□ -1.79
HDX-201ENST00000297977 AIMP1Q12904 312 aaKnown RBP3.84□□□□□ -1.79
HDX-201ENST00000297977 TICAM2Q86XR7 235 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 ITPRIPQ8IWB1 547 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 IFT57Q9NWB7 429 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 PPP4R2Q9NY27 417 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 KCTD17Q8N5Z5 321 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 BLMP54132 1417 aaPredicted RBP3.84□□□□□ -1.79
HDX-201ENST00000297977 ALKQ9UM73 1620 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 VWDEQ8N2E2 1590 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 USP31Q70CQ4 1352 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 TRAPPC3LQ5T215 181 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 TPTE2Q6XPS3 522 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 SRCIN1Q9C0H9 1055 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 DDX19BQ9UMR2 479 aa3.84□□□□□ -1.79
HDX-201ENST00000297977 IL16Q14005 1332 aa3.84□□□□□ -1.8
HDX-201ENST00000297977 HOXB7P09629 217 aa3.84□□□□□ -1.8
HDX-201ENST00000297977 G3BP1Q13283 466 aaKnown RBP eCLIP3.84□□□□□ -1.8
HDX-201ENST00000297977 NLGN1Q8N2Q7 840 aa3.84□□□□□ -1.8
HDX-201ENST00000297977 PDZRN3Q9UPQ7 1066 aa3.84□□□□□ -1.8
HDX-201ENST00000297977 ASXL1Q8IXJ9 1541 aa3.84□□□□□ -1.8
HDX-201ENST00000297977 TCERG1O14776 1098 aaKnown RBP3.83□□□□□ -1.8
HDX-201ENST00000297977 DHX8Q14562 1220 aaKnown RBP3.83□□□□□ -1.8
HDX-201ENST00000297977 GNL3LQ9NVN8 582 aaKnown RBP3.83□□□□□ -1.8
HDX-201ENST00000297977 PARP3Q9Y6F1 533 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 ZBED9Q6R2W3 1325 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 CCT4P50991 539 aaKnown RBP3.83□□□□□ -1.8
HDX-201ENST00000297977 ACSBG1Q96GR2 724 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 MPHOSPH8Q99549 860 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 NYXQ9GZU5 481 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 KIF13AQ9H1H9 1805 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 ERBB4Q15303 1308 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 TULP4Q9NRJ4 1543 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 UBTFL1P0CB47 393 aaPredicted RBP3.83□□□□□ -1.8
HDX-201ENST00000297977 PRIM1P49642 420 aaKnown RBP3.83□□□□□ -1.8
HDX-201ENST00000297977 ST5P78524 1137 aa3.83□□□□□ -1.8
HDX-201ENST00000297977 CARD14Q9BXL6 1004 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms