RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 SMC4Q9NTJ3 1288 aa27.45■■□□□ 1.98
SOX17-201ENST00000297316 ANKRD24Q8TF21 1146 aa27.42■■□□□ 1.98
SOX17-201ENST00000297316 CLUAP1Q96AJ1 413 aa27.42■■□□□ 1.98
SOX17-201ENST00000297316 C8orf58Q8NAV2 365 aa27.41■■□□□ 1.98
SOX17-201ENST00000297316 GAS2L2Q8NHY3 880 aa27.41■■□□□ 1.98
SOX17-201ENST00000297316 CRYBG1Q9Y4K1 1723 aa27.4■■□□□ 1.98
SOX17-201ENST00000297316 CENPQQ7L2Z9 268 aaPredicted RBP27.4■■□□□ 1.98
SOX17-201ENST00000297316 CRB1P82279 1406 aa27.4■■□□□ 1.98
SOX17-201ENST00000297316 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
SOX17-201ENST00000297316 VAMP4O75379 141 aa27.39■■□□□ 1.98
SOX17-201ENST00000297316 RTF1Q92541 710 aaKnown RBP27.39■■□□□ 1.97
SOX17-201ENST00000297316 KRT24Q2M2I5 525 aa27.38■■□□□ 1.97
SOX17-201ENST00000297316 TCERG1O14776 1098 aaKnown RBP27.38■■□□□ 1.97
SOX17-201ENST00000297316 CHRNA2Q15822 529 aa27.38■■□□□ 1.97
SOX17-201ENST00000297316 CHL1O00533 1208 aa27.36■■□□□ 1.97
SOX17-201ENST00000297316 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
SOX17-201ENST00000297316 ZKSCAN2Q63HK3 967 aa27.35■■□□□ 1.97
SOX17-201ENST00000297316 NOB1Q9ULX3 412 aaKnown RBP27.35■■□□□ 1.97
SOX17-201ENST00000297316 COL18A1P39060 1754 aa27.35■■□□□ 1.97
SOX17-201ENST00000297316 GNAT3A8MTJ3 354 aa27.35■■□□□ 1.97
SOX17-201ENST00000297316 IGHDP01880 384 aa27.35■■□□□ 1.97
SOX17-201ENST00000297316 TWISTNBQ3B726 338 aaPredicted RBP27.35■■□□□ 1.97
SOX17-201ENST00000297316 ERBB3P21860 1342 aa27.34■■□□□ 1.97
SOX17-201ENST00000297316 TRIM27P14373 513 aa27.33■■□□□ 1.97
SOX17-201ENST00000297316 IL17REQ8NFR9 667 aa27.33■■□□□ 1.97
SOX17-201ENST00000297316 KIAA0232Q92628 1395 aa27.32■■□□□ 1.96
SOX17-201ENST00000297316 MAP3K5Q99683 1374 aa27.32■■□□□ 1.96
SOX17-201ENST00000297316 MSH5O43196 834 aa27.32■■□□□ 1.96
SOX17-201ENST00000297316 ALDH1L2Q3SY69 923 aa27.32■■□□□ 1.96
SOX17-201ENST00000297316 DZIP1LQ8IYY4 767 aaKnown RBP27.3■■□□□ 1.96
SOX17-201ENST00000297316 CAMTA1Q9Y6Y1 1673 aa27.3■■□□□ 1.96
SOX17-201ENST00000297316 LRRC37A3O60309 1634 aa27.3■■□□□ 1.96
SOX17-201ENST00000297316 NCAPD2Q15021 1401 aa27.3■■□□□ 1.96
SOX17-201ENST00000297316 MVPQ14764 893 aaKnown RBP27.29■■□□□ 1.96
SOX17-201ENST00000297316 ATF7IPQ6VMQ6 1270 aa27.29■■□□□ 1.96
SOX17-201ENST00000297316 PCDHB15Q9Y5E8 787 aa27.28■■□□□ 1.96
SOX17-201ENST00000297316 NHSL1Q5SYE7 1610 aa27.28■■□□□ 1.96
SOX17-201ENST00000297316 HTATSF1O43719 755 aaKnown RBP27.28■■□□□ 1.96
SOX17-201ENST00000297316 FTSJ3Q8IY81 847 aaKnown RBP27.28■■□□□ 1.96
SOX17-201ENST00000297316 MRPL50Q8N5N7 158 aaKnown RBP27.28■■□□□ 1.96
SOX17-201ENST00000297316 TSPYL4Q9UJ04 414 aa27.28■■□□□ 1.96
SOX17-201ENST00000297316 MS4A1P11836 297 aa27.27■■□□□ 1.96
SOX17-201ENST00000297316 NLRP2Q9NX02 1062 aa27.27■■□□□ 1.96
SOX17-201ENST00000297316 ZNF428Q96B54 188 aa27.26■■□□□ 1.95
SOX17-201ENST00000297316 KIF16BQ96L93 1317 aa27.26■■□□□ 1.95
SOX17-201ENST00000297316 LMO7Q8WWI1 1683 aa27.25■■□□□ 1.95
SOX17-201ENST00000297316 LGR6Q9HBX8 967 aa27.25■■□□□ 1.95
SOX17-201ENST00000297316 PDE4AP27815 886 aa27.24■■□□□ 1.95
SOX17-201ENST00000297316 ZNF530Q6P9A1 599 aaPredicted RBP27.24■■□□□ 1.95
SOX17-201ENST00000297316 CPDO75976 1380 aa27.23■■□□□ 1.95
SOX17-201ENST00000297316 LTBP4Q8N2S1 1624 aa27.23■■□□□ 1.95
SOX17-201ENST00000297316 CSB-PGBD3P0DP91 1061 aa27.23■■□□□ 1.95
SOX17-201ENST00000297316 ABCA3Q99758 1704 aa27.23■■□□□ 1.95
SOX17-201ENST00000297316 PLEKHO1Q53GL0 409 aaPredicted RBP27.22■■□□□ 1.95
SOX17-201ENST00000297316 VIRMAQ69YN4 1812 aaKnown RBP27.22■■□□□ 1.95
SOX17-201ENST00000297316 FAM208AQ9UK61 1670 aaKnown RBP27.22■■□□□ 1.95
SOX17-201ENST00000297316 BRPF1P55201 1214 aaPredicted RBP27.22■■□□□ 1.95
SOX17-201ENST00000297316 TMEM57Q8N5G2 664 aa27.22■■□□□ 1.95
SOX17-201ENST00000297316 BACH2Q9BYV9 841 aa27.21■■□□□ 1.95
SOX17-201ENST00000297316 MPRIPQ6WCQ1 1025 aa27.21■■□□□ 1.95
SOX17-201ENST00000297316 IPO8O15397 1037 aaKnown RBP27.2■■□□□ 1.94
SOX17-201ENST00000297316 HAP1P54257 671 aaPredicted RBP27.2■■□□□ 1.94
SOX17-201ENST00000297316 AAMPQ13685 434 aa27.2■■□□□ 1.94
SOX17-201ENST00000297316 ITPRIPQ8IWB1 547 aa27.19■■□□□ 1.94
SOX17-201ENST00000297316 PRDM11Q9NQV5 511 aa27.19■■□□□ 1.94
SOX17-201ENST00000297316 ROBO1Q9Y6N7 1651 aa27.19■■□□□ 1.94
SOX17-201ENST00000297316 CEMIPQ8WUJ3 1361 aa27.18■■□□□ 1.94
SOX17-201ENST00000297316 RGS3P49796 1198 aa27.18■■□□□ 1.94
SOX17-201ENST00000297316 TAF7Q15545 349 aaPredicted RBP27.18■■□□□ 1.94
SOX17-201ENST00000297316 AMOTQ4VCS5 1084 aa27.18■■□□□ 1.94
SOX17-201ENST00000297316 AKAP4Q5JQC9 854 aa27.18■■□□□ 1.94
SOX17-201ENST00000297316 MEGF6O75095 1541 aa27.16■■□□□ 1.94
SOX17-201ENST00000297316 ABCC6O95255 1503 aa27.15■■□□□ 1.94
SOX17-201ENST00000297316 C1orf141Q5JVX7 400 aa27.15■■□□□ 1.94
SOX17-201ENST00000297316 RAPGEF4Q8WZA2 1011 aa27.15■■□□□ 1.94
SOX17-201ENST00000297316 DDX19BQ9UMR2 479 aa27.13■■□□□ 1.93
SOX17-201ENST00000297316 RNMTO43148 476 aaKnown RBP27.12■■□□□ 1.93
SOX17-201ENST00000297316 ARHGAP45Q92619 1136 aa27.11■■□□□ 1.93
SOX17-201ENST00000297316 NECTIN2Q92692 538 aa27.11■■□□□ 1.93
SOX17-201ENST00000297316 KCNQ3O43525 872 aa27.1■■□□□ 1.93
SOX17-201ENST00000297316 TATP17735 454 aaPredicted RBP27.1■■□□□ 1.93
SOX17-201ENST00000297316 TEFQ10587 303 aa27.08■■□□□ 1.93
SOX17-201ENST00000297316 ZBTB40Q9NUA8 1239 aa27.08■■□□□ 1.93
SOX17-201ENST00000297316 KDM3BQ7LBC6 1761 aa27.08■■□□□ 1.93
SOX17-201ENST00000297316 COL5A2P05997 1499 aaPredicted RBP27.08■■□□□ 1.93
SOX17-201ENST00000297316 SLC4A2P04920 1241 aa27.08■■□□□ 1.93
SOX17-201ENST00000297316 ABCC4O15439 1325 aa27.08■■□□□ 1.92
SOX17-201ENST00000297316 G2E3Q7L622 706 aa27.07■■□□□ 1.92
SOX17-201ENST00000297316 RWDD1Q9H446 243 aaPredicted RBP27.07■■□□□ 1.92
SOX17-201ENST00000297316 WDR17Q8IZU2 1322 aa27.07■■□□□ 1.92
SOX17-201ENST00000297316 TOM1L2Q6ZVM7 507 aa27.06■■□□□ 1.92
SOX17-201ENST00000297316 STRN4Q9NRL3 753 aa27.06■■□□□ 1.92
SOX17-201ENST00000297316 BABAM1Q9NWV8 329 aa27.06■■□□□ 1.92
SOX17-201ENST00000297316 C8orf34Q49A92 452 aa27.05■■□□□ 1.92
SOX17-201ENST00000297316 RGS12O14924 1447 aa27.05■■□□□ 1.92
SOX17-201ENST00000297316 BTBD11A6QL63 1104 aa27.05■■□□□ 1.92
SOX17-201ENST00000297316 API5Q9BZZ5 524 aaKnown RBP27.04■■□□□ 1.92
SOX17-201ENST00000297316 ERICH6Q7L0X2 663 aa27.04■■□□□ 1.92
SOX17-201ENST00000297316 PDZRN3Q9UPQ7 1066 aa27.04■■□□□ 1.92
SOX17-201ENST00000297316 AHDC1Q5TGY3 1603 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms