RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 RAI14Q9P0K7 980 aa18.28■□□□□ 0.52
FNDC1-201ENST00000297267 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
FNDC1-201ENST00000297267 SRRTQ9BXP5 876 aaKnown RBP18.28■□□□□ 0.52
FNDC1-201ENST00000297267 ABCF2Q9UG63 623 aa18.28■□□□□ 0.52
FNDC1-201ENST00000297267 GPRASP1Q5JY77 1395 aa18.28■□□□□ 0.52
FNDC1-201ENST00000297267 TAX1BP1Q86VP1 789 aa18.28■□□□□ 0.52
FNDC1-201ENST00000297267 CKAP2LQ8IYA6 745 aa18.28■□□□□ 0.52
FNDC1-201ENST00000297267 ZNF396Q96N95 335 aaPredicted RBP18.28■□□□□ 0.52
FNDC1-201ENST00000297267 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.52
FNDC1-201ENST00000297267 ZNF830Q96NB3 372 aaPredicted RBP18.27■□□□□ 0.52
FNDC1-201ENST00000297267 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
FNDC1-201ENST00000297267 FYCO1Q9BQS8 1478 aa18.27■□□□□ 0.52
FNDC1-201ENST00000297267 CCDC57Q2TAC2 916 aa18.27■□□□□ 0.52
FNDC1-201ENST00000297267 SRCIN1Q9C0H9 1055 aa18.27■□□□□ 0.52
FNDC1-201ENST00000297267 MINDY4BA8MYZ0 360 aa18.27■□□□□ 0.51
FNDC1-201ENST00000297267 SPG7Q9UQ90 795 aa18.27■□□□□ 0.51
FNDC1-201ENST00000297267 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
FNDC1-201ENST00000297267 CCDC192P0DO97 292 aa18.26■□□□□ 0.51
FNDC1-201ENST00000297267 NME9Q86XW9 330 aa18.26■□□□□ 0.51
FNDC1-201ENST00000297267 TNNT1P13805 278 aa18.26■□□□□ 0.51
FNDC1-201ENST00000297267 DTNBO60941 627 aa18.25■□□□□ 0.51
FNDC1-201ENST00000297267 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
FNDC1-201ENST00000297267 FILIP1LQ4L180 1135 aa18.25■□□□□ 0.51
FNDC1-201ENST00000297267 CPLX3Q8WVH0 158 aa18.25■□□□□ 0.51
FNDC1-201ENST00000297267 WWC3Q9ULE0 1092 aa18.25■□□□□ 0.51
FNDC1-201ENST00000297267 CCAR1Q8IX12 1150 aaKnown RBP18.25■□□□□ 0.51
FNDC1-201ENST00000297267 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
FNDC1-201ENST00000297267 SPDYE4A6NLX3 237 aa18.25■□□□□ 0.51
FNDC1-201ENST00000297267 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
FNDC1-201ENST00000297267 KRI1Q8N9T8 703 aaKnown RBP18.25■□□□□ 0.51
FNDC1-201ENST00000297267 LRRFIP2Q9Y608 721 aaKnown RBP18.25■□□□□ 0.51
FNDC1-201ENST00000297267 NEFHP12036 1026 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 MCM4P33991 863 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
FNDC1-201ENST00000297267 HSP90AA4PQ58FG1 418 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 ECM2O94769 699 aaPredicted RBP18.24■□□□□ 0.51
FNDC1-201ENST00000297267 IGHDP01880 384 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 ANXA1P04083 346 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 PKNOX2Q96KN3 472 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 RTEL1-TNFRSF6BF6WH68 1400 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 PPFIBP1Q86W92 1011 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 BIN1O00499 593 aa18.24■□□□□ 0.51
FNDC1-201ENST00000297267 SLFN5Q08AF3 891 aa18.23■□□□□ 0.51
FNDC1-201ENST00000297267 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
FNDC1-201ENST00000297267 NOM1Q5C9Z4 860 aaKnown RBP18.23■□□□□ 0.51
FNDC1-201ENST00000297267 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
FNDC1-201ENST00000297267 BLOC1S2Q6QNY1 142 aa18.23■□□□□ 0.51
FNDC1-201ENST00000297267 SMARCE1Q969G3 411 aa18.23■□□□□ 0.51
FNDC1-201ENST00000297267 LETM1O95202 739 aaPredicted RBP18.23■□□□□ 0.51
FNDC1-201ENST00000297267 SSR1P43307 286 aaKnown RBP18.23■□□□□ 0.51
FNDC1-201ENST00000297267 LRP2BPQ9P2M1 347 aa18.23■□□□□ 0.51
FNDC1-201ENST00000297267 CCDC181Q5TID7 509 aa18.22■□□□□ 0.51
FNDC1-201ENST00000297267 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
FNDC1-201ENST00000297267 SSH1Q8WYL5 1049 aa18.22■□□□□ 0.51
FNDC1-201ENST00000297267 TFIP11Q9UBB9 837 aaKnown RBP18.22■□□□□ 0.51
FNDC1-201ENST00000297267 CCT4P50991 539 aaKnown RBP18.21■□□□□ 0.51
FNDC1-201ENST00000297267 NUP62CLQ9H1M0 184 aa18.21■□□□□ 0.51
FNDC1-201ENST00000297267 SYCP1Q15431 976 aa18.21■□□□□ 0.51
FNDC1-201ENST00000297267 TERF1P54274 439 aa18.21■□□□□ 0.51
FNDC1-201ENST00000297267 PAF1Q8N7H5 531 aa18.21■□□□□ 0.51
FNDC1-201ENST00000297267 LIG1P18858 919 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 GPTP24298 496 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.2■□□□□ 0.5
FNDC1-201ENST00000297267 CCDC102AQ96A19 550 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 PDCL3Q9H2J4 239 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 KIAA1107Q9UPP5 1409 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 TXLNAP40222 546 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 KRT85P78386 507 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 HAND2P61296 217 aa18.2■□□□□ 0.5
FNDC1-201ENST00000297267 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
FNDC1-201ENST00000297267 CCDC112Q8NEF3 446 aa18.19■□□□□ 0.5
FNDC1-201ENST00000297267 POLR3GO15318 223 aaPredicted RBP18.19■□□□□ 0.5
FNDC1-201ENST00000297267 ERC1Q8IUD2 1116 aa18.19■□□□□ 0.5
FNDC1-201ENST00000297267 MBD3O95983 291 aa18.19■□□□□ 0.5
FNDC1-201ENST00000297267 TTC16Q8NEE8 873 aa18.19■□□□□ 0.5
FNDC1-201ENST00000297267 LRRC2Q9BYS8 371 aa18.18■□□□□ 0.5
FNDC1-201ENST00000297267 LEKR1Q6ZMV7 388 aa18.18■□□□□ 0.5
FNDC1-201ENST00000297267 ACBD3Q9H3P7 528 aa18.18■□□□□ 0.5
FNDC1-201ENST00000297267 ATP5J2-PTCD1G3V325 749 aa18.18■□□□□ 0.5
FNDC1-201ENST00000297267 UBA5Q9GZZ9 404 aa18.18■□□□□ 0.5
FNDC1-201ENST00000297267 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
FNDC1-201ENST00000297267 SNRKQ9NRH2 765 aa18.18■□□□□ 0.5
FNDC1-201ENST00000297267 GNAT3A8MTJ3 354 aa18.17■□□□□ 0.5
FNDC1-201ENST00000297267 METTL24Q5JXM2 366 aa18.17■□□□□ 0.5
FNDC1-201ENST00000297267 SLC3A2P08195 630 aaKnown RBP18.17■□□□□ 0.5
FNDC1-201ENST00000297267 CFAP100Q494V2 611 aa18.17■□□□□ 0.5
FNDC1-201ENST00000297267 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
FNDC1-201ENST00000297267 DAPK1P53355 1430 aa18.17■□□□□ 0.5
FNDC1-201ENST00000297267 MYCNP04198 464 aaPredicted RBP18.17■□□□□ 0.5
FNDC1-201ENST00000297267 USP25Q9UHP3 1055 aa18.17■□□□□ 0.5
FNDC1-201ENST00000297267 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
FNDC1-201ENST00000297267 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
FNDC1-201ENST00000297267 KIAA1328Q86T90 577 aa18.16■□□□□ 0.5
FNDC1-201ENST00000297267 TNPO1Q92973 898 aaKnown RBP18.16■□□□□ 0.5
FNDC1-201ENST00000297267 TBC1D2Q9BYX2 928 aa18.16■□□□□ 0.5
FNDC1-201ENST00000297267 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms