RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 JAKMIP1Q96N16 626 aaKnown RBP19.05■□□□□ 0.64
ARHGEF28-201ENST00000296794 SMARCA5O60264 1052 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF28-201ENST00000296794 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
ARHGEF28-201ENST00000296794 TNPO1Q92973 898 aaKnown RBP19.05■□□□□ 0.64
ARHGEF28-201ENST00000296794 FOXO3O43524 673 aa19.05■□□□□ 0.64
ARHGEF28-201ENST00000296794 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
ARHGEF28-201ENST00000296794 ADGRF5Q8IZF2 1346 aa19.04■□□□□ 0.64
ARHGEF28-201ENST00000296794 SART3Q15020 963 aaKnown RBP19.04■□□□□ 0.64
ARHGEF28-201ENST00000296794 CCDC158Q5M9N0 1113 aa19.04■□□□□ 0.64
ARHGEF28-201ENST00000296794 BLOC1S2Q6QNY1 142 aa19.04■□□□□ 0.64
ARHGEF28-201ENST00000296794 SSFA2P28290 1259 aa19.04■□□□□ 0.64
ARHGEF28-201ENST00000296794 AACSQ86V21 672 aa19.04■□□□□ 0.64
ARHGEF28-201ENST00000296794 MPHOSPH8Q99549 860 aa19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 DCTN1Q14203 1278 aa19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 ZSCAN31Q96LW9 406 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 RRP9O43818 475 aaKnown RBP19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 MYL6BP14649 208 aa19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 ATP2B1P20020 1258 aa19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 HSP90B2PQ58FF3 399 aa19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 TBC1D32Q96NH3 1257 aa19.03■□□□□ 0.64
ARHGEF28-201ENST00000296794 ACBD3Q9H3P7 528 aa19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 IKQ13123 557 aaPredicted RBP19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 MCM10Q7L590 875 aa19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 MIS18AQ9NYP9 233 aa19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 SCAF11Q99590 1463 aaKnown RBP19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 XBP1P17861 261 aa19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 ME1P48163 572 aa19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 NUTM1Q86Y26 1132 aa19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 SPATA32Q96LK8 384 aa19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 UPF3BQ9BZI7 483 aaKnown RBP19.02■□□□□ 0.64
ARHGEF28-201ENST00000296794 MX1P20591 662 aa19.02■□□□□ 0.63
ARHGEF28-201ENST00000296794 BRMS1Q9HCU9 246 aa19.02■□□□□ 0.63
ARHGEF28-201ENST00000296794 NUP62CLQ9H1M0 184 aa19.01■□□□□ 0.63
ARHGEF28-201ENST00000296794 KIF14Q15058 1648 aa19.01■□□□□ 0.63
ARHGEF28-201ENST00000296794 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
ARHGEF28-201ENST00000296794 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
ARHGEF28-201ENST00000296794 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
ARHGEF28-201ENST00000296794 CCDC112Q8NEF3 446 aa19.01■□□□□ 0.63
ARHGEF28-201ENST00000296794 STARD3NLO95772 234 aa19■□□□□ 0.63
ARHGEF28-201ENST00000296794 CCP110O43303 1012 aa19■□□□□ 0.63
ARHGEF28-201ENST00000296794 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
ARHGEF28-201ENST00000296794 CASTP20810 708 aaKnown RBP18.99■□□□□ 0.63
ARHGEF28-201ENST00000296794 TTLL5Q6EMB2 1281 aa18.99■□□□□ 0.63
ARHGEF28-201ENST00000296794 ADAMTS2O95450 1211 aa18.98■□□□□ 0.63
ARHGEF28-201ENST00000296794 GNAT3A8MTJ3 354 aa18.98■□□□□ 0.63
ARHGEF28-201ENST00000296794 MTMR7Q9Y216 660 aa18.98■□□□□ 0.63
ARHGEF28-201ENST00000296794 FANCAO15360 1455 aa18.98■□□□□ 0.63
ARHGEF28-201ENST00000296794 TTC39AQ5SRH9 613 aa18.98■□□□□ 0.63
ARHGEF28-201ENST00000296794 RUFY1Q96T51 708 aa18.98■□□□□ 0.63
ARHGEF28-201ENST00000296794 JMYQ8N9B5 988 aa18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 NAP1L1P55209 391 aaKnown RBP18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 BMP2KLQ5H9B9 411 aa18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 PRM3Q9NNZ6 103 aa18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 SERPINC1P01008 464 aa18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 TBC1D9Q6ZT07 1266 aa18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
ARHGEF28-201ENST00000296794 RALGAPBQ86X10 1494 aa18.96■□□□□ 0.63
ARHGEF28-201ENST00000296794 CADPS2Q86UW7 1296 aa18.96■□□□□ 0.63
ARHGEF28-201ENST00000296794 AK7Q96M32 723 aa18.96■□□□□ 0.63
ARHGEF28-201ENST00000296794 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
ARHGEF28-201ENST00000296794 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 CEP126Q9P2H0 1117 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 CFAP45Q9UL16 551 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 RRP12Q5JTH9 1297 aaKnown RBP18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 CCAR1Q8IX12 1150 aaKnown RBP18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 THOC2Q8NI27 1593 aaKnown RBP18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 PTCD1O75127 700 aaKnown RBP18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 AMOTQ4VCS5 1084 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 FERMT3Q86UX7 667 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 TMOD3Q9NYL9 352 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 MAP3K11Q16584 847 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 NME9Q86XW9 330 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 CCDC83Q8IWF9 413 aa18.95■□□□□ 0.62
ARHGEF28-201ENST00000296794 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
ARHGEF28-201ENST00000296794 FILIP1LQ4L180 1135 aa18.94■□□□□ 0.62
ARHGEF28-201ENST00000296794 PKNOX2Q96KN3 472 aa18.94■□□□□ 0.62
ARHGEF28-201ENST00000296794 CCDC66A2RUB6 948 aa18.94■□□□□ 0.62
ARHGEF28-201ENST00000296794 KRT32Q14532 448 aa18.94■□□□□ 0.62
ARHGEF28-201ENST00000296794 C8orf34Q49A92 452 aa18.94■□□□□ 0.62
ARHGEF28-201ENST00000296794 PCDHB15Q9Y5E8 787 aa18.94■□□□□ 0.62
ARHGEF28-201ENST00000296794 F6X3S4 739 aa18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 CEP57L1Q8IYX8 460 aa18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 CAGE1Q8TC20 777 aa18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 DHX29Q7Z478 1369 aaKnown RBP18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 BRPF1P55201 1214 aaPredicted RBP18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 DHX8Q14562 1220 aaKnown RBP18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 NACAP1Q9BZK3 213 aa18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 FILIP1Q7Z7B0 1213 aa18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 PDIA4P13667 645 aaKnown RBP18.93■□□□□ 0.62
ARHGEF28-201ENST00000296794 UGGT2Q9NYU1 1516 aa18.92■□□□□ 0.62
ARHGEF28-201ENST00000296794 RAB11FIP3O75154 756 aa18.92■□□□□ 0.62
ARHGEF28-201ENST00000296794 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
ARHGEF28-201ENST00000296794 BICDL1Q6ZP65 573 aa18.92■□□□□ 0.62
ARHGEF28-201ENST00000296794 SMARCE1Q969G3 411 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms