RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
CDCP1-201ENST00000296129 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
CDCP1-201ENST00000296129 TNNT3P45378 269 aaPredicted RBP20.5■□□□□ 0.87
CDCP1-201ENST00000296129 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
CDCP1-201ENST00000296129 TRIM5Q9C035 493 aa20.5■□□□□ 0.87
CDCP1-201ENST00000296129 PHF8Q9UPP1 1060 aa20.5■□□□□ 0.87
CDCP1-201ENST00000296129 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
CDCP1-201ENST00000296129 CEP126Q9P2H0 1117 aa20.5■□□□□ 0.87
CDCP1-201ENST00000296129 WDR33Q9C0J8 1336 aaKnown RBP20.5■□□□□ 0.87
CDCP1-201ENST00000296129 NAP1L1P55209 391 aaKnown RBP20.49■□□□□ 0.87
CDCP1-201ENST00000296129 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
CDCP1-201ENST00000296129 KDM5BQ9UGL1 1544 aa20.49■□□□□ 0.87
CDCP1-201ENST00000296129 BLOC1S2Q6QNY1 142 aa20.49■□□□□ 0.87
CDCP1-201ENST00000296129 FAM13BQ9NYF5 915 aa20.48■□□□□ 0.87
CDCP1-201ENST00000296129 SMC2O95347 1197 aa20.48■□□□□ 0.87
CDCP1-201ENST00000296129 SKAP1Q86WV1 359 aa20.48■□□□□ 0.87
CDCP1-201ENST00000296129 ITSN2Q9NZM3 1697 aa20.48■□□□□ 0.87
CDCP1-201ENST00000296129 NSD2O96028 1365 aa20.47■□□□□ 0.87
CDCP1-201ENST00000296129 PTPRKQ15262 1439 aa20.47■□□□□ 0.87
CDCP1-201ENST00000296129 FMNL2Q96PY5 1086 aa20.47■□□□□ 0.87
CDCP1-201ENST00000296129 EPS15P42566 896 aa20.47■□□□□ 0.87
CDCP1-201ENST00000296129 BCL11BQ9C0K0 894 aaPredicted RBP20.47■□□□□ 0.87
CDCP1-201ENST00000296129 LARP1BQ659C4 914 aaKnown RBP20.47■□□□□ 0.87
CDCP1-201ENST00000296129 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
CDCP1-201ENST00000296129 MX1P20591 662 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 PTCD1O75127 700 aaKnown RBP20.46■□□□□ 0.87
CDCP1-201ENST00000296129 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 MPRIPQ6WCQ1 1025 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 MYD88Q99836 296 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 F6X3S4 739 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 STARD3NLO95772 234 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 NUP133Q8WUM0 1156 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 TRIM22Q8IYM9 498 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 KIF1BPQ96EK5 621 aa20.46■□□□□ 0.87
CDCP1-201ENST00000296129 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
CDCP1-201ENST00000296129 ATP2B2Q01814 1243 aa20.45■□□□□ 0.86
CDCP1-201ENST00000296129 MNS1Q8NEH6 495 aa20.45■□□□□ 0.86
CDCP1-201ENST00000296129 CDK5RAP3Q96JB5 506 aa20.45■□□□□ 0.86
CDCP1-201ENST00000296129 FOXO3O43524 673 aa20.45■□□□□ 0.86
CDCP1-201ENST00000296129 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
CDCP1-201ENST00000296129 ATP10BO94823 1461 aa20.45■□□□□ 0.86
CDCP1-201ENST00000296129 TXLNAP40222 546 aa20.44■□□□□ 0.86
CDCP1-201ENST00000296129 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
CDCP1-201ENST00000296129 RAB11FIP3O75154 756 aa20.44■□□□□ 0.86
CDCP1-201ENST00000296129 LARP1Q6PKG0 1096 aaKnown RBP20.43■□□□□ 0.86
CDCP1-201ENST00000296129 SYCP2Q9BX26 1530 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 ME1P48163 572 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
CDCP1-201ENST00000296129 DUOX2Q9NRD8 1548 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 TDO2P48775 406 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 KRT85P78386 507 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 RAI14Q9P0K7 980 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 R3HCC1Q9Y3T6 440 aaKnown RBP20.43■□□□□ 0.86
CDCP1-201ENST00000296129 CASTP20810 708 aaKnown RBP20.43■□□□□ 0.86
CDCP1-201ENST00000296129 JMYQ8N9B5 988 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 CTNNA3Q9UI47 895 aa20.43■□□□□ 0.86
CDCP1-201ENST00000296129 MAPKBP1O60336 1514 aa20.42■□□□□ 0.86
CDCP1-201ENST00000296129 IGHMBP2P38935 993 aaKnown RBP20.42■□□□□ 0.86
CDCP1-201ENST00000296129 NUP153P49790 1475 aaKnown RBP20.42■□□□□ 0.86
CDCP1-201ENST00000296129 TNMDQ9H2S6 317 aa20.42■□□□□ 0.86
CDCP1-201ENST00000296129 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
CDCP1-201ENST00000296129 PLCH2O75038 1416 aa20.41■□□□□ 0.86
CDCP1-201ENST00000296129 IDH1O75874 414 aaKnown RBP20.41■□□□□ 0.86
CDCP1-201ENST00000296129 TRIM27P14373 513 aa20.41■□□□□ 0.86
CDCP1-201ENST00000296129 CCDC173Q0VFZ6 552 aa20.41■□□□□ 0.86
CDCP1-201ENST00000296129 KRT32Q14532 448 aa20.41■□□□□ 0.86
CDCP1-201ENST00000296129 METTL24Q5JXM2 366 aa20.41■□□□□ 0.86
CDCP1-201ENST00000296129 TTC21BQ7Z4L5 1316 aa20.4■□□□□ 0.86
CDCP1-201ENST00000296129 LRP2BPQ9P2M1 347 aa20.4■□□□□ 0.86
CDCP1-201ENST00000296129 LRRFIP2Q9Y608 721 aaKnown RBP20.4■□□□□ 0.86
CDCP1-201ENST00000296129 TTLL5Q6EMB2 1281 aa20.4■□□□□ 0.86
CDCP1-201ENST00000296129 ANKRD36BQ8N2N9 1353 aa20.4■□□□□ 0.86
CDCP1-201ENST00000296129 SPC24Q8NBT2 197 aa20.4■□□□□ 0.86
CDCP1-201ENST00000296129 CCDC192P0DO97 292 aa20.4■□□□□ 0.86
CDCP1-201ENST00000296129 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.86
CDCP1-201ENST00000296129 GLRX3O76003 335 aaKnown RBP20.39■□□□□ 0.85
CDCP1-201ENST00000296129 OFD1O75665 1012 aa20.39■□□□□ 0.85
CDCP1-201ENST00000296129 BRPF1P55201 1214 aaPredicted RBP20.39■□□□□ 0.85
CDCP1-201ENST00000296129 PPP1R1BQ9UD71 204 aaPredicted RBP20.39■□□□□ 0.85
CDCP1-201ENST00000296129 BRPF3Q9ULD4 1205 aa20.39■□□□□ 0.85
CDCP1-201ENST00000296129 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
CDCP1-201ENST00000296129 MAGEC2Q9UBF1 373 aaPredicted RBP20.39■□□□□ 0.85
CDCP1-201ENST00000296129 ACEP12821 1306 aa20.39■□□□□ 0.85
CDCP1-201ENST00000296129 FILIP1LQ4L180 1135 aa20.38■□□□□ 0.85
CDCP1-201ENST00000296129 SPATA32Q96LK8 384 aa20.38■□□□□ 0.85
CDCP1-201ENST00000296129 CIZ1Q9ULV3 898 aaPredicted RBP20.38■□□□□ 0.85
CDCP1-201ENST00000296129 ZNF771Q7L3S4 317 aaPredicted RBP20.38■□□□□ 0.85
CDCP1-201ENST00000296129 UBAC1Q9BSL1 405 aa20.38■□□□□ 0.85
CDCP1-201ENST00000296129 BOLA2Q9H3K6 86 aa20.38■□□□□ 0.85
CDCP1-201ENST00000296129 FAM83GA6ND36 823 aa20.38■□□□□ 0.85
CDCP1-201ENST00000296129 CDKL5O76039 1030 aa20.38■□□□□ 0.85
CDCP1-201ENST00000296129 RBM5P52756 815 aaKnown RBP eCLIP20.37■□□□□ 0.85
CDCP1-201ENST00000296129 CT47A1Q5JQC4 288 aaPredicted RBP20.37■□□□□ 0.85
CDCP1-201ENST00000296129 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
CDCP1-201ENST00000296129 IMMTQ16891 758 aaKnown RBP20.37■□□□□ 0.85
CDCP1-201ENST00000296129 PRPF40BQ6NWY9 871 aaKnown RBP20.37■□□□□ 0.85
CDCP1-201ENST00000296129 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
CDCP1-201ENST00000296129 KRT18P05783 430 aaKnown RBP20.37■□□□□ 0.85
CDCP1-201ENST00000296129 ARGLU1Q9NWB6 273 aaPredicted RBP20.37■□□□□ 0.85
CDCP1-201ENST00000296129 ASXL2Q76L83 1435 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms