RNA–Protein interactions for RNA: ENST00000296029.3

PF4-201, Transcript of platelet factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4-201ENST00000296029 CASZ1Q86V15 1759 aa23.56■■□□□ 1.36
PF4-201ENST00000296029 USHBP1Q8N6Y0 703 aa23.56■■□□□ 1.36
PF4-201ENST00000296029 NCAPD2Q15021 1401 aa23.54■■□□□ 1.36
PF4-201ENST00000296029 PAPPAQ13219 1627 aa23.54■■□□□ 1.36
PF4-201ENST00000296029 RAPGEF4Q8WZA2 1011 aa23.53■■□□□ 1.36
PF4-201ENST00000296029 WASHC2AQ641Q2 1341 aa23.53■■□□□ 1.36
PF4-201ENST00000296029 SLC15A2Q16348 729 aa23.52■■□□□ 1.36
PF4-201ENST00000296029 PANK3Q9H999 370 aa23.52■■□□□ 1.36
PF4-201ENST00000296029 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
PF4-201ENST00000296029 DOT1LQ8TEK3 1739 aa23.52■■□□□ 1.36
PF4-201ENST00000296029 STK32BQ9NY57 414 aa23.51■■□□□ 1.35
PF4-201ENST00000296029 POLKQ9UBT6 870 aa23.51■■□□□ 1.35
PF4-201ENST00000296029 KAT6BQ8WYB5 2073 aa23.51■■□□□ 1.35
PF4-201ENST00000296029 MAP2P11137 1827 aaKnown RBP23.51■■□□□ 1.35
PF4-201ENST00000296029 NSD2O96028 1365 aa23.51■■□□□ 1.35
PF4-201ENST00000296029 TATP17735 454 aaPredicted RBP23.5■■□□□ 1.35
PF4-201ENST00000296029 PDGFDQ9GZP0 370 aaPredicted RBP23.5■■□□□ 1.35
PF4-201ENST00000296029 PRIM1P49642 420 aaKnown RBP23.49■■□□□ 1.35
PF4-201ENST00000296029 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
PF4-201ENST00000296029 LRRC4BQ9NT99 713 aa23.48■■□□□ 1.35
PF4-201ENST00000296029 PCDH11XQ9BZA7 1347 aa23.46■■□□□ 1.35
PF4-201ENST00000296029 PCDH11YQ9BZA8 1340 aa23.46■■□□□ 1.35
PF4-201ENST00000296029 PKD1L3Q7Z443 1732 aa23.45■■□□□ 1.34
PF4-201ENST00000296029 SLC27A3Q5K4L6 730 aa23.45■■□□□ 1.34
PF4-201ENST00000296029 SYTL4Q96C24 671 aaPredicted RBP23.45■■□□□ 1.34
PF4-201ENST00000296029 EYA1Q99502 592 aa23.44■■□□□ 1.34
PF4-201ENST00000296029 LY75O60449 1722 aa23.44■■□□□ 1.34
PF4-201ENST00000296029 CYP27B1O15528 508 aa23.43■■□□□ 1.34
PF4-201ENST00000296029 TNNT2P45379 298 aaPredicted RBP23.43■■□□□ 1.34
PF4-201ENST00000296029 ZNF827Q17R98 1081 aa23.43■■□□□ 1.34
PF4-201ENST00000296029 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
PF4-201ENST00000296029 ZBTB7AO95365 584 aa23.41■■□□□ 1.34
PF4-201ENST00000296029 PTGER2P43116 358 aa23.41■■□□□ 1.34
PF4-201ENST00000296029 EIF4A2Q14240 407 aaKnown RBP23.41■■□□□ 1.34
PF4-201ENST00000296029 AKT1S1Q96B36 256 aa23.41■■□□□ 1.34
PF4-201ENST00000296029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
PF4-201ENST00000296029 PPP1R1BQ9UD71 204 aaPredicted RBP23.39■■□□□ 1.33
PF4-201ENST00000296029 NKX1-1Q15270 411 aaPredicted RBP23.38■■□□□ 1.33
PF4-201ENST00000296029 MTFR1LQ9H019 292 aa23.38■■□□□ 1.33
PF4-201ENST00000296029 QSER1Q2KHR3 1735 aa23.38■■□□□ 1.33
PF4-201ENST00000296029 TOGARAM1Q9Y4F4 1720 aa23.38■■□□□ 1.33
PF4-201ENST00000296029 PLEKHG2Q9H7P9 1386 aa23.38■■□□□ 1.33
PF4-201ENST00000296029 SGIP1Q9BQI5 828 aa23.37■■□□□ 1.33
PF4-201ENST00000296029 KNSTRNQ9Y448 316 aa23.37■■□□□ 1.33
PF4-201ENST00000296029 SPG7Q9UQ90 795 aa23.36■■□□□ 1.33
PF4-201ENST00000296029 ATF5Q9Y2D1 282 aaPredicted RBP23.36■■□□□ 1.33
PF4-201ENST00000296029 IGSF1Q8N6C5 1336 aa23.35■■□□□ 1.33
PF4-201ENST00000296029 KCNQ4P56696 695 aa23.35■■□□□ 1.33
PF4-201ENST00000296029 AMER1Q5JTC6 1135 aaPredicted RBP23.35■■□□□ 1.33
PF4-201ENST00000296029 MORC1Q86VD1 984 aa23.35■■□□□ 1.33
PF4-201ENST00000296029 CCNL1Q9UK58 526 aaPredicted RBP23.34■■□□□ 1.33
PF4-201ENST00000296029 ITGB4P16144 1822 aa23.33■■□□□ 1.32
PF4-201ENST00000296029 TUBGCP6Q96RT7 1819 aa23.32■■□□□ 1.32
PF4-201ENST00000296029 PNPLA7Q6ZV29 1317 aa23.32■■□□□ 1.32
PF4-201ENST00000296029 MPRIPQ6WCQ1 1025 aa23.31■■□□□ 1.32
PF4-201ENST00000296029 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
PF4-201ENST00000296029 PER1O15534 1290 aaPredicted RBP23.3■■□□□ 1.32
PF4-201ENST00000296029 SLC16A10Q8TF71 515 aa23.3■■□□□ 1.32
PF4-201ENST00000296029 PHKG2P15735 406 aa23.29■■□□□ 1.32
PF4-201ENST00000296029 IFNL2Q8IZJ0 200 aa23.29■■□□□ 1.32
PF4-201ENST00000296029 PIGBQ92521 554 aa23.29■■□□□ 1.32
PF4-201ENST00000296029 TFCP2L1Q9NZI6 479 aa23.29■■□□□ 1.32
PF4-201ENST00000296029 COL24A1Q17RW2 1714 aa23.28■■□□□ 1.32
PF4-201ENST00000296029 SMARCC1Q92922 1105 aaPredicted RBP23.27■■□□□ 1.32
PF4-201ENST00000296029 C5P01031 1676 aa23.27■■□□□ 1.32
PF4-201ENST00000296029 UTRNP46939 3433 aa23.26■■□□□ 1.31
PF4-201ENST00000296029 TAF1LQ8IZX4 1826 aa23.25■■□□□ 1.31
PF4-201ENST00000296029 HMGB2P26583 209 aaKnown RBP23.24■■□□□ 1.31
PF4-201ENST00000296029 ARXQ96QS3 562 aa23.24■■□□□ 1.31
PF4-201ENST00000296029 FHDC1Q9C0D6 1143 aaPredicted RBP23.24■■□□□ 1.31
PF4-201ENST00000296029 KDRP35968 1356 aa23.24■■□□□ 1.31
PF4-201ENST00000296029 IL13P35225 146 aa23.23■■□□□ 1.31
PF4-201ENST00000296029 AEBP1Q8IUX7 1158 aa23.23■■□□□ 1.31
PF4-201ENST00000296029 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
PF4-201ENST00000296029 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
PF4-201ENST00000296029 TMOD3Q9NYL9 352 aa23.22■■□□□ 1.31
PF4-201ENST00000296029 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
PF4-201ENST00000296029 NPC1L1Q9UHC9 1359 aa23.21■■□□□ 1.31
PF4-201ENST00000296029 AMOTQ4VCS5 1084 aa23.2■■□□□ 1.3
PF4-201ENST00000296029 COL23A1Q86Y22 540 aaPredicted RBP23.2■■□□□ 1.3
PF4-201ENST00000296029 C4BP0C0L5 1744 aa23.19■■□□□ 1.3
PF4-201ENST00000296029 MTHFSP49914 203 aa23.19■■□□□ 1.3
PF4-201ENST00000296029 ASAP1Q9ULH1 1129 aa23.19■■□□□ 1.3
PF4-201ENST00000296029 ERVV-2B6SEH9 535 aa23.18■■□□□ 1.3
PF4-201ENST00000296029 HSP90AB1P08238 724 aaKnown RBP23.18■■□□□ 1.3
PF4-201ENST00000296029 SULT6B1Q6IMI4 303 aa23.18■■□□□ 1.3
PF4-201ENST00000296029 DCAF5Q96JK2 942 aa23.18■■□□□ 1.3
PF4-201ENST00000296029 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
PF4-201ENST00000296029 LOC102724428A0A0B4J2F2 783 aa23.17■■□□□ 1.3
PF4-201ENST00000296029 SIK1P57059 783 aa23.17■■□□□ 1.3
PF4-201ENST00000296029 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
PF4-201ENST00000296029 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
PF4-201ENST00000296029 DCAF8L1A6NGE4 600 aa23.16■■□□□ 1.3
PF4-201ENST00000296029 POLD1P28340 1107 aa23.16■■□□□ 1.3
PF4-201ENST00000296029 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
PF4-201ENST00000296029 ATG3Q9NT62 314 aa23.16■■□□□ 1.3
PF4-201ENST00000296029 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
PF4-201ENST00000296029 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
PF4-201ENST00000296029 UBR3Q6ZT12 1888 aa23.13■■□□□ 1.29
PF4-201ENST00000296029 LINC00116Q8NCU8 138 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms