RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 KRT28Q7Z3Y7 464 aa23.17■■□□□ 1.3
GABRB1-201ENST00000295454 DDX17Q92841 729 aaKnown RBP23.17■■□□□ 1.3
GABRB1-201ENST00000295454 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
GABRB1-201ENST00000295454 LMTK3Q96Q04 1460 aa23.16■■□□□ 1.3
GABRB1-201ENST00000295454 ZNF428Q96B54 188 aa23.15■■□□□ 1.3
GABRB1-201ENST00000295454 BACH2Q9BYV9 841 aa23.15■■□□□ 1.3
GABRB1-201ENST00000295454 RGPD5Q99666 1765 aa23.15■■□□□ 1.3
GABRB1-201ENST00000295454 BRPF1P55201 1214 aaPredicted RBP23.15■■□□□ 1.3
GABRB1-201ENST00000295454 MSH6P52701 1360 aa23.14■■□□□ 1.29
GABRB1-201ENST00000295454 KCNH5Q8NCM2 988 aa23.14■■□□□ 1.29
GABRB1-201ENST00000295454 IPO8O15397 1037 aaKnown RBP23.13■■□□□ 1.29
GABRB1-201ENST00000295454 GCP02774 474 aa23.13■■□□□ 1.29
GABRB1-201ENST00000295454 AAMPQ13685 434 aa23.13■■□□□ 1.29
GABRB1-201ENST00000295454 MED1Q15648 1581 aaPredicted RBP23.12■■□□□ 1.29
GABRB1-201ENST00000295454 NBPF6Q5VWK0 638 aa23.12■■□□□ 1.29
GABRB1-201ENST00000295454 GAS2L2Q8NHY3 880 aa23.12■■□□□ 1.29
GABRB1-201ENST00000295454 NBPF4Q96M43 638 aa23.12■■□□□ 1.29
GABRB1-201ENST00000295454 USP19O94966 1318 aa23.12■■□□□ 1.29
GABRB1-201ENST00000295454 ATF3P18847 181 aa23.12■■□□□ 1.29
GABRB1-201ENST00000295454 DDX19BQ9UMR2 479 aa23.12■■□□□ 1.29
GABRB1-201ENST00000295454 LRRC59Q96AG4 307 aaKnown RBP23.11■■□□□ 1.29
GABRB1-201ENST00000295454 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
GABRB1-201ENST00000295454 DCCP43146 1447 aa23.1■■□□□ 1.29
GABRB1-201ENST00000295454 ARHGEF25Q86VW2 580 aa23.1■■□□□ 1.29
GABRB1-201ENST00000295454 KIAA0232Q92628 1395 aa23.08■■□□□ 1.28
GABRB1-201ENST00000295454 MAP3K5Q99683 1374 aa23.07■■□□□ 1.28
GABRB1-201ENST00000295454 ZBTB40Q9NUA8 1239 aa23.07■■□□□ 1.28
GABRB1-201ENST00000295454 GNAT3A8MTJ3 354 aa23.06■■□□□ 1.28
GABRB1-201ENST00000295454 NCOA3Q9Y6Q9 1424 aa23.06■■□□□ 1.28
GABRB1-201ENST00000295454 ABCC4O15439 1325 aa23.06■■□□□ 1.28
GABRB1-201ENST00000295454 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
GABRB1-201ENST00000295454 TSPYL4Q9UJ04 414 aa23.06■■□□□ 1.28
GABRB1-201ENST00000295454 IL17REQ8NFR9 667 aa23.05■■□□□ 1.28
GABRB1-201ENST00000295454 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
GABRB1-201ENST00000295454 CAMTA1Q9Y6Y1 1673 aa23.05■■□□□ 1.28
GABRB1-201ENST00000295454 VIRMAQ69YN4 1812 aaKnown RBP23.05■■□□□ 1.28
GABRB1-201ENST00000295454 RWDD1Q9H446 243 aaPredicted RBP23.05■■□□□ 1.28
GABRB1-201ENST00000295454 RGS12O14924 1447 aa23.04■■□□□ 1.28
GABRB1-201ENST00000295454 C8orf34Q49A92 452 aa23.04■■□□□ 1.28
GABRB1-201ENST00000295454 PDZRN3Q9UPQ7 1066 aa23.04■■□□□ 1.28
GABRB1-201ENST00000295454 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
GABRB1-201ENST00000295454 HTATSF1O43719 755 aaKnown RBP23.02■■□□□ 1.28
GABRB1-201ENST00000295454 ANKRD24Q8TF21 1146 aa23.02■■□□□ 1.28
GABRB1-201ENST00000295454 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
GABRB1-201ENST00000295454 LMO7Q8WWI1 1683 aa23.02■■□□□ 1.28
GABRB1-201ENST00000295454 ZC3H6P61129 1189 aaKnown RBP23.02■■□□□ 1.28
GABRB1-201ENST00000295454 FAM208AQ9UK61 1670 aaKnown RBP23.01■■□□□ 1.27
GABRB1-201ENST00000295454 PXDNQ92626 1479 aa23.01■■□□□ 1.27
GABRB1-201ENST00000295454 CADPS2Q86UW7 1296 aa23.01■■□□□ 1.27
GABRB1-201ENST00000295454 C1orf115Q9H7X2 142 aa23.01■■□□□ 1.27
GABRB1-201ENST00000295454 NCAPD2Q15021 1401 aa23.01■■□□□ 1.27
GABRB1-201ENST00000295454 ZBTB7BO15156 539 aaPredicted RBP23■■□□□ 1.27
GABRB1-201ENST00000295454 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
GABRB1-201ENST00000295454 HDAC1Q13547 482 aaPredicted RBP22.99■■□□□ 1.27
GABRB1-201ENST00000295454 FAM161AQ3B820 660 aa22.99■■□□□ 1.27
GABRB1-201ENST00000295454 COL18A1P39060 1754 aa22.99■■□□□ 1.27
GABRB1-201ENST00000295454 CABLES1Q8TDN4 633 aa22.99■■□□□ 1.27
GABRB1-201ENST00000295454 API5Q9BZZ5 524 aaKnown RBP22.99■■□□□ 1.27
GABRB1-201ENST00000295454 TNS3Q68CZ2 1445 aa22.98■■□□□ 1.27
GABRB1-201ENST00000295454 ANP32AP39687 249 aaKnown RBP22.97■■□□□ 1.27
GABRB1-201ENST00000295454 LGR6Q9HBX8 967 aa22.96■■□□□ 1.27
GABRB1-201ENST00000295454 KDM3BQ7LBC6 1761 aa22.96■■□□□ 1.27
GABRB1-201ENST00000295454 G2E3Q7L622 706 aa22.96■■□□□ 1.27
GABRB1-201ENST00000295454 NPHP3Q7Z494 1330 aa22.96■■□□□ 1.27
GABRB1-201ENST00000295454 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
GABRB1-201ENST00000295454 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
GABRB1-201ENST00000295454 ERBB3P21860 1342 aa22.93■■□□□ 1.26
GABRB1-201ENST00000295454 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
GABRB1-201ENST00000295454 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
GABRB1-201ENST00000295454 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
GABRB1-201ENST00000295454 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
GABRB1-201ENST00000295454 SMC5Q8IY18 1101 aa22.92■■□□□ 1.26
GABRB1-201ENST00000295454 NECTIN2Q92692 538 aa22.92■■□□□ 1.26
GABRB1-201ENST00000295454 SPATA31A3Q5VYP0 1347 aa22.91■■□□□ 1.26
GABRB1-201ENST00000295454 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
GABRB1-201ENST00000295454 IPO9Q96P70 1041 aaKnown RBP22.9■■□□□ 1.26
GABRB1-201ENST00000295454 CHRNA2Q15822 529 aa22.9■■□□□ 1.26
GABRB1-201ENST00000295454 PLEKHO1Q53GL0 409 aaPredicted RBP22.9■■□□□ 1.26
GABRB1-201ENST00000295454 INTS3Q68E01 1043 aaKnown RBP22.9■■□□□ 1.26
GABRB1-201ENST00000295454 MPRIPQ6WCQ1 1025 aa22.9■■□□□ 1.26
GABRB1-201ENST00000295454 PTPRCP08575 1304 aa22.89■■□□□ 1.25
GABRB1-201ENST00000295454 AKAP4Q5JQC9 854 aa22.88■■□□□ 1.25
GABRB1-201ENST00000295454 KCNQ3O43525 872 aa22.88■■□□□ 1.25
GABRB1-201ENST00000295454 SIPA1L3O60292 1781 aaPredicted RBP22.87■■□□□ 1.25
GABRB1-201ENST00000295454 F6X3S4 739 aa22.87■■□□□ 1.25
GABRB1-201ENST00000295454 CACNA1FO60840 1977 aa22.86■■□□□ 1.25
GABRB1-201ENST00000295454 BABAM1Q9NWV8 329 aa22.85■■□□□ 1.25
GABRB1-201ENST00000295454 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
GABRB1-201ENST00000295454 ADAMTS7Q9UKP4 1686 aa22.85■■□□□ 1.25
GABRB1-201ENST00000295454 MEGF6O75095 1541 aa22.84■■□□□ 1.25
GABRB1-201ENST00000295454 ATP10DQ9P241 1426 aa22.84■■□□□ 1.25
GABRB1-201ENST00000295454 RNMTO43148 476 aaKnown RBP22.84■■□□□ 1.25
GABRB1-201ENST00000295454 SEC24BO95487 1268 aa22.84■■□□□ 1.25
GABRB1-201ENST00000295454 CHMP4BQ9H444 224 aaKnown RBP22.84■■□□□ 1.25
GABRB1-201ENST00000295454 NLRP2Q9NX02 1062 aa22.84■■□□□ 1.25
GABRB1-201ENST00000295454 NOP58Q9Y2X3 529 aaKnown RBP22.84■■□□□ 1.25
GABRB1-201ENST00000295454 ABCA3Q99758 1704 aa22.83■■□□□ 1.25
GABRB1-201ENST00000295454 STK31Q9BXU1 1019 aa22.83■■□□□ 1.25
GABRB1-201ENST00000295454 SLAIN2Q9P270 581 aa22.83■■□□□ 1.25
GABRB1-201ENST00000295454 NUCB1Q02818 461 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms