RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 DOT1LQ8TEK3 1739 aa22.62■■□□□ 1.21
UBXN1-201ENST00000294119 KLRG1Q96E93 195 aa22.61■■□□□ 1.21
UBXN1-201ENST00000294119 NBPF1Q3BBV0 1214 aa22.6■■□□□ 1.21
UBXN1-201ENST00000294119 ZNF692Q9BU19 519 aaPredicted RBP22.6■■□□□ 1.21
UBXN1-201ENST00000294119 TNS4Q8IZW8 715 aa22.59■■□□□ 1.21
UBXN1-201ENST00000294119 IGSF1Q8N6C5 1336 aa22.58■■□□□ 1.21
UBXN1-201ENST00000294119 LTN1O94822 1766 aa22.58■■□□□ 1.21
UBXN1-201ENST00000294119 CCNL1Q9UK58 526 aaPredicted RBP22.58■■□□□ 1.21
UBXN1-201ENST00000294119 USP31Q70CQ4 1352 aa22.58■■□□□ 1.21
UBXN1-201ENST00000294119 SLC34A2O95436 690 aa22.57■■□□□ 1.2
UBXN1-201ENST00000294119 PRIM1P49642 420 aaKnown RBP22.57■■□□□ 1.2
UBXN1-201ENST00000294119 C5P01031 1676 aa22.55■■□□□ 1.2
UBXN1-201ENST00000294119 MSH5O43196 834 aa22.55■■□□□ 1.2
UBXN1-201ENST00000294119 ANKRD24Q8TF21 1146 aa22.55■■□□□ 1.2
UBXN1-201ENST00000294119 DDX54Q8TDD1 881 aaKnown RBP22.53■■□□□ 1.2
UBXN1-201ENST00000294119 MON2Q7Z3U7 1717 aa22.53■■□□□ 1.2
UBXN1-201ENST00000294119 TAF1LQ8IZX4 1826 aa22.52■■□□□ 1.2
UBXN1-201ENST00000294119 TOGARAM1Q9Y4F4 1720 aa22.52■■□□□ 1.2
UBXN1-201ENST00000294119 RBM46Q8TBY0 533 aaKnown RBP22.52■■□□□ 1.2
UBXN1-201ENST00000294119 HTRA3P83110 453 aa22.51■■□□□ 1.19
UBXN1-201ENST00000294119 FLAD1Q8NFF5 587 aa22.51■■□□□ 1.19
UBXN1-201ENST00000294119 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
UBXN1-201ENST00000294119 FAM208AQ9UK61 1670 aaKnown RBP22.51■■□□□ 1.19
UBXN1-201ENST00000294119 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
UBXN1-201ENST00000294119 NMRK2Q9NPI5 230 aa22.49■■□□□ 1.19
UBXN1-201ENST00000294119 KIAA1551Q9HCM1 1747 aa22.48■■□□□ 1.19
UBXN1-201ENST00000294119 EVC2Q86UK5 1308 aa22.48■■□□□ 1.19
UBXN1-201ENST00000294119 WWC3Q9ULE0 1092 aa22.47■■□□□ 1.19
UBXN1-201ENST00000294119 KTN1Q86UP2 1357 aaKnown RBP22.47■■□□□ 1.19
UBXN1-201ENST00000294119 USP47Q96K76 1375 aa22.47■■□□□ 1.19
UBXN1-201ENST00000294119 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
UBXN1-201ENST00000294119 KIF13BQ9NQT8 1826 aa22.45■■□□□ 1.19
UBXN1-201ENST00000294119 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.19
UBXN1-201ENST00000294119 FSTL1Q12841 308 aa22.45■■□□□ 1.18
UBXN1-201ENST00000294119 C4BP0C0L5 1744 aa22.44■■□□□ 1.18
UBXN1-201ENST00000294119 PXDNLA1KZ92 1463 aa22.42■■□□□ 1.18
UBXN1-201ENST00000294119 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
UBXN1-201ENST00000294119 SBNO2Q9Y2G9 1366 aa22.42■■□□□ 1.18
UBXN1-201ENST00000294119 MEGF6O75095 1541 aa22.41■■□□□ 1.18
UBXN1-201ENST00000294119 HMGB2P26583 209 aaKnown RBP22.41■■□□□ 1.18
UBXN1-201ENST00000294119 CD163L1Q9NR16 1453 aa22.41■■□□□ 1.18
UBXN1-201ENST00000294119 NME9Q86XW9 330 aa22.4■■□□□ 1.18
UBXN1-201ENST00000294119 IP6K1Q92551 441 aa22.4■■□□□ 1.18
UBXN1-201ENST00000294119 ZCRB1Q8TBF4 217 aaKnown RBP22.39■■□□□ 1.17
UBXN1-201ENST00000294119 PALLDQ8WX93 1383 aa22.37■■□□□ 1.17
UBXN1-201ENST00000294119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
UBXN1-201ENST00000294119 BRCA1P38398 1863 aaKnown RBP22.36■■□□□ 1.17
UBXN1-201ENST00000294119 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
UBXN1-201ENST00000294119 NSD3Q9BZ95 1437 aa22.35■■□□□ 1.17
UBXN1-201ENST00000294119 PLEKHG2Q9H7P9 1386 aa22.35■■□□□ 1.17
UBXN1-201ENST00000294119 N4BP2Q86UW6 1770 aaPredicted RBP22.35■■□□□ 1.17
UBXN1-201ENST00000294119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.34■■□□□ 1.17
UBXN1-201ENST00000294119 HSPA1AP0DMV8 641 aaKnown RBP22.34■■□□□ 1.17
UBXN1-201ENST00000294119 HSPA1BP0DMV9 641 aaKnown RBP22.34■■□□□ 1.17
UBXN1-201ENST00000294119 PKD1L3Q7Z443 1732 aa22.34■■□□□ 1.17
UBXN1-201ENST00000294119 MAP2P11137 1827 aaKnown RBP22.32■■□□□ 1.16
UBXN1-201ENST00000294119 SSFA2P28290 1259 aa22.32■■□□□ 1.16
UBXN1-201ENST00000294119 TGFB2P61812 414 aa22.32■■□□□ 1.16
UBXN1-201ENST00000294119 SMIM5Q71RC9 77 aa22.32■■□□□ 1.16
UBXN1-201ENST00000294119 C16orf71Q8IYS4 520 aaPredicted RBP22.31■■□□□ 1.16
UBXN1-201ENST00000294119 AK7Q96M32 723 aa22.31■■□□□ 1.16
UBXN1-201ENST00000294119 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
UBXN1-201ENST00000294119 TNRC6CQ9HCJ0 1690 aaKnown RBP22.3■■□□□ 1.16
UBXN1-201ENST00000294119 BCS1LQ9Y276 419 aa22.3■■□□□ 1.16
UBXN1-201ENST00000294119 ARFGEF1Q9Y6D6 1849 aa22.29■■□□□ 1.16
UBXN1-201ENST00000294119 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
UBXN1-201ENST00000294119 EDC4Q6P2E9 1401 aaKnown RBP22.29■■□□□ 1.16
UBXN1-201ENST00000294119 CGNL1Q0VF96 1302 aa22.29■■□□□ 1.16
UBXN1-201ENST00000294119 C9orf131Q5VYM1 1079 aa22.28■■□□□ 1.16
UBXN1-201ENST00000294119 ARHGAP27Q6ZUM4 889 aa22.28■■□□□ 1.16
UBXN1-201ENST00000294119 PHF14O94880 888 aa22.27■■□□□ 1.16
UBXN1-201ENST00000294119 PCDH10Q9P2E7 1040 aa22.27■■□□□ 1.16
UBXN1-201ENST00000294119 ITGB4P16144 1822 aa22.27■■□□□ 1.15
UBXN1-201ENST00000294119 A0A0G2JLW4 131 aa22.25■■□□□ 1.15
UBXN1-201ENST00000294119 MMP10P09238 476 aa22.25■■□□□ 1.15
UBXN1-201ENST00000294119 HOXC9P31274 260 aa22.25■■□□□ 1.15
UBXN1-201ENST00000294119 SMC1BQ8NDV3 1235 aa22.25■■□□□ 1.15
UBXN1-201ENST00000294119 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
UBXN1-201ENST00000294119 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
UBXN1-201ENST00000294119 LINC00116Q8NCU8 138 aa22.23■■□□□ 1.15
UBXN1-201ENST00000294119 SMARCC1Q92922 1105 aaPredicted RBP22.23■■□□□ 1.15
UBXN1-201ENST00000294119 KCNA3P22001 575 aa22.22■■□□□ 1.15
UBXN1-201ENST00000294119 RRAGCQ9HB90 399 aa22.22■■□□□ 1.15
UBXN1-201ENST00000294119 DPEP1P16444 411 aa22.21■■□□□ 1.15
UBXN1-201ENST00000294119 NBPF6Q5VWK0 638 aa22.21■■□□□ 1.15
UBXN1-201ENST00000294119 MPRIPQ6WCQ1 1025 aa22.21■■□□□ 1.15
UBXN1-201ENST00000294119 NBPF4Q96M43 638 aa22.21■■□□□ 1.15
UBXN1-201ENST00000294119 SBF1O95248 1867 aa22.21■■□□□ 1.15
UBXN1-201ENST00000294119 FCHSD2O94868 740 aa22.2■■□□□ 1.14
UBXN1-201ENST00000294119 PCDH11XQ9BZA7 1347 aa22.2■■□□□ 1.14
UBXN1-201ENST00000294119 PCDH11YQ9BZA8 1340 aa22.2■■□□□ 1.14
UBXN1-201ENST00000294119 A0A1W2PP64 1363 aa22.19■■□□□ 1.14
UBXN1-201ENST00000294119 C4AP0C0L4 1744 aa22.19■■□□□ 1.14
UBXN1-201ENST00000294119 DCAF5Q96JK2 942 aa22.18■■□□□ 1.14
UBXN1-201ENST00000294119 RTL1A6NKG5 1358 aa22.17■■□□□ 1.14
UBXN1-201ENST00000294119 CYP27B1O15528 508 aa22.17■■□□□ 1.14
UBXN1-201ENST00000294119 LOC102724428A0A0B4J2F2 783 aa22.16■■□□□ 1.14
UBXN1-201ENST00000294119 SIK1P57059 783 aa22.16■■□□□ 1.14
UBXN1-201ENST00000294119 HDGFL2Q7Z4V5 671 aaPredicted RBP22.16■■□□□ 1.14
UBXN1-201ENST00000294119 PIGBQ92521 554 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms