RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 STK32BQ9NY57 414 aa35.09■■■■□ 3.21
U2AF1-201ENST00000291552 KIF24Q5T7B8 1368 aa35.09■■■■□ 3.21
U2AF1-201ENST00000291552 SLC15A2Q16348 729 aa35.08■■■■□ 3.21
U2AF1-201ENST00000291552 NSD2O96028 1365 aa35.07■■■■□ 3.2
U2AF1-201ENST00000291552 LY75O60449 1722 aa35.06■■■■□ 3.2
U2AF1-201ENST00000291552 EMILIN1Q9Y6C2 1016 aa35.06■■■■□ 3.2
U2AF1-201ENST00000291552 ZCRB1Q8TBF4 217 aaKnown RBP35.05■■■■□ 3.2
U2AF1-201ENST00000291552 TUBGCP6Q96RT7 1819 aa35.04■■■■□ 3.2
U2AF1-201ENST00000291552 LRRC4BQ9NT99 713 aa35.03■■■■□ 3.2
U2AF1-201ENST00000291552 ZBTB7AO95365 584 aa35.02■■■■□ 3.2
U2AF1-201ENST00000291552 QSER1Q2KHR3 1735 aa35.01■■■■□ 3.2
U2AF1-201ENST00000291552 PKD1L3Q7Z443 1732 aa35.01■■■■□ 3.2
U2AF1-201ENST00000291552 HSPA5P11021 654 aaKnown RBP35.01■■■■□ 3.2
U2AF1-201ENST00000291552 CCER1Q8TC90 406 aaPredicted RBP35.01■■■■□ 3.2
U2AF1-201ENST00000291552 PPP1R1BQ9UD71 204 aaPredicted RBP35■■■■□ 3.19
U2AF1-201ENST00000291552 NCAPD2Q15021 1401 aa34.99■■■■□ 3.19
U2AF1-201ENST00000291552 ZNF827Q17R98 1081 aa34.99■■■■□ 3.19
U2AF1-201ENST00000291552 PTGER2P43116 358 aa34.98■■■■□ 3.19
U2AF1-201ENST00000291552 PRIM1P49642 420 aaKnown RBP34.98■■■■□ 3.19
U2AF1-201ENST00000291552 CGNL1Q0VF96 1302 aa34.98■■■■□ 3.19
U2AF1-201ENST00000291552 TOGARAM1Q9Y4F4 1720 aa34.98■■■■□ 3.19
U2AF1-201ENST00000291552 EIF4G2P78344 907 aaKnown RBP eCLIP34.97■■■■□ 3.19
U2AF1-201ENST00000291552 POLR3GLQ9BT43 218 aa34.97■■■■□ 3.19
U2AF1-201ENST00000291552 RAPGEF4Q8WZA2 1011 aa34.96■■■■□ 3.19
U2AF1-201ENST00000291552 SYTL4Q96C24 671 aaPredicted RBP34.95■■■■□ 3.19
U2AF1-201ENST00000291552 TATP17735 454 aaPredicted RBP34.94■■■■□ 3.18
U2AF1-201ENST00000291552 ATF5Q9Y2D1 282 aaPredicted RBP34.94■■■■□ 3.18
U2AF1-201ENST00000291552 ITGB4P16144 1822 aa34.92■■■■□ 3.18
U2AF1-201ENST00000291552 AKT1S1Q96B36 256 aa34.91■■■■□ 3.18
U2AF1-201ENST00000291552 WASHC2AQ641Q2 1341 aa34.9■■■■□ 3.18
U2AF1-201ENST00000291552 KCNQ4P56696 695 aa34.9■■■■□ 3.18
U2AF1-201ENST00000291552 SLC27A3Q5K4L6 730 aa34.9■■■■□ 3.18
U2AF1-201ENST00000291552 SGIP1Q9BQI5 828 aa34.9■■■■□ 3.18
U2AF1-201ENST00000291552 PPM1GO15355 546 aaPredicted RBP34.89■■■■□ 3.18
U2AF1-201ENST00000291552 MTFR1LQ9H019 292 aa34.89■■■■□ 3.18
U2AF1-201ENST00000291552 COL24A1Q17RW2 1714 aa34.89■■■■□ 3.18
U2AF1-201ENST00000291552 PCDH11XQ9BZA7 1347 aa34.88■■■■□ 3.17
U2AF1-201ENST00000291552 PCDH11YQ9BZA8 1340 aa34.88■■■■□ 3.17
U2AF1-201ENST00000291552 POLKQ9UBT6 870 aa34.88■■■■□ 3.17
U2AF1-201ENST00000291552 CYP27B1O15528 508 aa34.86■■■■□ 3.17
U2AF1-201ENST00000291552 TAF1LQ8IZX4 1826 aa34.83■■■■□ 3.17
U2AF1-201ENST00000291552 PANK3Q9H999 370 aa34.83■■■■□ 3.17
U2AF1-201ENST00000291552 C5P01031 1676 aa34.82■■■■□ 3.17
U2AF1-201ENST00000291552 PNPLA7Q6ZV29 1317 aa34.81■■■■□ 3.16
U2AF1-201ENST00000291552 EYA1Q99502 592 aa34.81■■■■□ 3.16
U2AF1-201ENST00000291552 TNNT2P45379 298 aaPredicted RBP34.8■■■■□ 3.16
U2AF1-201ENST00000291552 CCNL1Q9UK58 526 aaPredicted RBP34.78■■■■□ 3.16
U2AF1-201ENST00000291552 EIF4A2Q14240 407 aaKnown RBP34.76■■■■□ 3.16
U2AF1-201ENST00000291552 FHDC1Q9C0D6 1143 aaPredicted RBP34.76■■■■□ 3.16
U2AF1-201ENST00000291552 TFCP2L1Q9NZI6 479 aa34.72■■■■□ 3.15
U2AF1-201ENST00000291552 PALLDQ8WX93 1383 aa34.72■■■■□ 3.15
U2AF1-201ENST00000291552 NKX1-1Q15270 411 aaPredicted RBP34.71■■■■□ 3.15
U2AF1-201ENST00000291552 SYT17Q9BSW7 474 aa34.71■■■■□ 3.15
U2AF1-201ENST00000291552 MPRIPQ6WCQ1 1025 aa34.7■■■■□ 3.15
U2AF1-201ENST00000291552 ARXQ96QS3 562 aa34.7■■■■□ 3.15
U2AF1-201ENST00000291552 SPG7Q9UQ90 795 aa34.69■■■■□ 3.14
U2AF1-201ENST00000291552 IGSF1Q8N6C5 1336 aa34.68■■■■□ 3.14
U2AF1-201ENST00000291552 SLC16A10Q8TF71 515 aa34.68■■■■□ 3.14
U2AF1-201ENST00000291552 MAP3K5Q99683 1374 aa34.68■■■■□ 3.14
U2AF1-201ENST00000291552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.68■■■■□ 3.14
U2AF1-201ENST00000291552 C4BP0C0L5 1744 aa34.67■■■■□ 3.14
U2AF1-201ENST00000291552 PIGBQ92521 554 aa34.65■■■■□ 3.14
U2AF1-201ENST00000291552 KIF7Q2M1P5 1343 aa34.64■■■■□ 3.14
U2AF1-201ENST00000291552 UBR3Q6ZT12 1888 aa34.64■■■■□ 3.14
U2AF1-201ENST00000291552 UTRNP46939 3433 aa34.64■■■■□ 3.14
U2AF1-201ENST00000291552 PLEKHG2Q9H7P9 1386 aa34.62■■■■□ 3.13
U2AF1-201ENST00000291552 PHKG2P15735 406 aa34.62■■■■□ 3.13
U2AF1-201ENST00000291552 YY1P25490 414 aa34.62■■■■□ 3.13
U2AF1-201ENST00000291552 COL23A1Q86Y22 540 aaPredicted RBP34.61■■■■□ 3.13
U2AF1-201ENST00000291552 DCAF8L1A6NGE4 600 aa34.6■■■■□ 3.13
U2AF1-201ENST00000291552 MORC1Q86VD1 984 aa34.6■■■■□ 3.13
U2AF1-201ENST00000291552 IFNL2Q8IZJ0 200 aa34.58■■■■□ 3.13
U2AF1-201ENST00000291552 SMARCC1Q92922 1105 aaPredicted RBP34.58■■■■□ 3.13
U2AF1-201ENST00000291552 AMER1Q5JTC6 1135 aaPredicted RBP34.57■■■■□ 3.12
U2AF1-201ENST00000291552 KNSTRNQ9Y448 316 aa34.57■■■■□ 3.12
U2AF1-201ENST00000291552 CHD4Q14839 1912 aa34.56■■■■□ 3.12
U2AF1-201ENST00000291552 POLD1P28340 1107 aa34.55■■■■□ 3.12
U2AF1-201ENST00000291552 AMIGO3Q86WK7 504 aa34.54■■■■□ 3.12
U2AF1-201ENST00000291552 TMOD3Q9NYL9 352 aa34.54■■■■□ 3.12
U2AF1-201ENST00000291552 AEBP1Q8IUX7 1158 aa34.53■■■■□ 3.12
U2AF1-201ENST00000291552 ASAP1Q9ULH1 1129 aa34.52■■■■□ 3.12
U2AF1-201ENST00000291552 KDM6AO15550 1401 aaPredicted RBP34.51■■■■□ 3.12
U2AF1-201ENST00000291552 MSH5O43196 834 aa34.51■■■■□ 3.12
U2AF1-201ENST00000291552 LOC102724428A0A0B4J2F2 783 aa34.49■■■■□ 3.11
U2AF1-201ENST00000291552 SIK1P57059 783 aa34.49■■■■□ 3.11
U2AF1-201ENST00000291552 MSL1Q68DK7 614 aa34.49■■■■□ 3.11
U2AF1-201ENST00000291552 KLHL34Q8N239 644 aa34.48■■■■□ 3.11
U2AF1-201ENST00000291552 LINC00116Q8NCU8 138 aa34.48■■■■□ 3.11
U2AF1-201ENST00000291552 ZNF831Q5JPB2 1677 aa34.47■■■■□ 3.11
U2AF1-201ENST00000291552 KDRP35968 1356 aa34.47■■■■□ 3.11
U2AF1-201ENST00000291552 IL13P35225 146 aa34.46■■■■□ 3.11
U2AF1-201ENST00000291552 ITPK1Q13572 414 aa34.46■■■■□ 3.11
U2AF1-201ENST00000291552 SMIM5Q71RC9 77 aa34.46■■■■□ 3.11
U2AF1-201ENST00000291552 ATG3Q9NT62 314 aa34.46■■■■□ 3.11
U2AF1-201ENST00000291552 GOLGB1Q14789 3259 aaKnown RBP34.45■■■■□ 3.11
U2AF1-201ENST00000291552 PER1O15534 1290 aaPredicted RBP34.45■■■■□ 3.11
U2AF1-201ENST00000291552 NLGN2Q8NFZ4 835 aa34.45■■■■□ 3.11
U2AF1-201ENST00000291552 AK7Q96M32 723 aa34.45■■■■□ 3.11
U2AF1-201ENST00000291552 COL5A3P25940 1745 aaPredicted RBP34.44■■■■□ 3.1
U2AF1-201ENST00000291552 PLEKHO1Q53GL0 409 aaPredicted RBP34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms