RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
HMBOX1-201ENST00000287701 ABCA8O94911 1581 aa11.86□□□□□ -0.51
HMBOX1-201ENST00000287701 MX1P20591 662 aa11.86□□□□□ -0.51
HMBOX1-201ENST00000287701 FUCA2Q9BTY2 467 aa11.86□□□□□ -0.51
HMBOX1-201ENST00000287701 TRPM2O94759 1503 aa11.86□□□□□ -0.51
HMBOX1-201ENST00000287701 SAMD9LQ8IVG5 1584 aa11.86□□□□□ -0.51
HMBOX1-201ENST00000287701 REC8O95072 547 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 PTCH1Q13635 1447 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 RAD50Q92878 1312 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 ARHGAP45Q92619 1136 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 PREX2Q70Z35 1606 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 FAM69CQ0P6D2 419 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 CFAP53Q96M91 514 aa11.85□□□□□ -0.51
HMBOX1-201ENST00000287701 CDC42BPBQ9Y5S2 1711 aa11.84□□□□□ -0.51
HMBOX1-201ENST00000287701 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
HMBOX1-201ENST00000287701 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
HMBOX1-201ENST00000287701 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
HMBOX1-201ENST00000287701 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
HMBOX1-201ENST00000287701 KIF24Q5T7B8 1368 aa11.84□□□□□ -0.51
HMBOX1-201ENST00000287701 CASC1Q6TDU7 716 aa11.83□□□□□ -0.51
HMBOX1-201ENST00000287701 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
HMBOX1-201ENST00000287701 CCDC112Q8NEF3 446 aa11.83□□□□□ -0.52
HMBOX1-201ENST00000287701 CARMIL2Q6F5E8 1435 aa11.82□□□□□ -0.52
HMBOX1-201ENST00000287701 NSD2O96028 1365 aa11.82□□□□□ -0.52
HMBOX1-201ENST00000287701 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
HMBOX1-201ENST00000287701 RPAP1Q9BWH6 1393 aaPredicted RBP11.82□□□□□ -0.52
HMBOX1-201ENST00000287701 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
HMBOX1-201ENST00000287701 MORC1Q86VD1 984 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 PTPRTO14522 1441 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 WDR33Q9C0J8 1336 aaKnown RBP11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 CD109Q6YHK3 1445 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 USP48Q86UV5 1035 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 UBE2HP62256 183 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 KMT5BQ4FZB7 885 aa11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.81□□□□□ -0.52
HMBOX1-201ENST00000287701 NSD3Q9BZ95 1437 aa11.8□□□□□ -0.52
HMBOX1-201ENST00000287701 SECISBP2LQ93073 1101 aaKnown RBP11.8□□□□□ -0.52
HMBOX1-201ENST00000287701 HNRNPH2P55795 449 aaKnown RBP11.8□□□□□ -0.52
HMBOX1-201ENST00000287701 RAD51AP2Q09MP3 1159 aa11.8□□□□□ -0.52
HMBOX1-201ENST00000287701 ERO1AQ96HE7 468 aa11.8□□□□□ -0.52
HMBOX1-201ENST00000287701 NOL10Q9BSC4 688 aaKnown RBP11.8□□□□□ -0.52
HMBOX1-201ENST00000287701 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.8□□□□□ -0.52
HMBOX1-201ENST00000287701 GADD45BO75293 160 aaPredicted RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 TNNT1P13805 278 aa11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 ANAPC15P60006 121 aa11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 BMS1Q14692 1282 aaKnown RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 AXDND1Q5T1B0 1012 aaPredicted RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 SIRT2Q8IXJ6 389 aa11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 AP5Z1O43299 807 aa11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 BRD2P25440 801 aaKnown RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
HMBOX1-201ENST00000287701 TXLNBQ8N3L3 684 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 CHAMP1Q96JM3 812 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 DCTPP1Q9H773 170 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 KCND1Q9NSA2 647 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 CCDC171Q6TFL3 1326 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 RGS12O14924 1447 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 CFAP65Q6ZU64 1925 aaKnown RBP11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 MPNDQ8N594 471 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 RASSF4Q9H2L5 321 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 BRMS1Q9HCU9 246 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 ABCC4O15439 1325 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 HECW2Q9P2P5 1572 aa11.78□□□□□ -0.52
HMBOX1-201ENST00000287701 ERC2O15083 957 aa11.77□□□□□ -0.52
HMBOX1-201ENST00000287701 SETBP1Q9Y6X0 1596 aa11.77□□□□□ -0.53
HMBOX1-201ENST00000287701 KNDC1Q76NI1 1749 aa11.77□□□□□ -0.53
HMBOX1-201ENST00000287701 CLGNO14967 610 aa11.77□□□□□ -0.53
HMBOX1-201ENST00000287701 EPB41L2O43491 1005 aaKnown RBP11.77□□□□□ -0.53
HMBOX1-201ENST00000287701 TMPOP42166 694 aaKnown RBP11.77□□□□□ -0.53
HMBOX1-201ENST00000287701 PSEN1P49768 467 aa11.77□□□□□ -0.53
HMBOX1-201ENST00000287701 SSH2Q76I76 1423 aa11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 PLEKHD1A6NEE1 506 aa11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 HNRNPMP52272 730 aaKnown RBP eCLIP11.76□□□□□ -0.539e-9■■■■■ 30.5
HMBOX1-201ENST00000287701 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 COL3A1P02461 1466 aaPredicted RBP11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 MTHFSP49914 203 aa11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 FAM135BQ49AJ0 1406 aa11.76□□□□□ -0.53
HMBOX1-201ENST00000287701 NEMFO60524 1076 aa11.75□□□□□ -0.53
HMBOX1-201ENST00000287701 H2AFXP16104 143 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms