RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SALL2Q9Y467 1007 aaPredicted RBP28.82■■■□□ 2.2
PDLIM3-203ENST00000284771 TRPC5Q9UL62 973 aaPredicted RBP28.81■■■□□ 2.2
PDLIM3-203ENST00000284771 GJD4Q96KN9 370 aaPredicted RBP28.8■■■□□ 2.2
PDLIM3-203ENST00000284771 RGS17Q9UGC6 210 aaPredicted RBP28.8■■■□□ 2.2
PDLIM3-203ENST00000284771 OVOS2A0A0G2JMS6 1433 aa28.8■■■□□ 2.2
PDLIM3-203ENST00000284771 NEFMP07197 916 aa28.8■■■□□ 2.2
PDLIM3-203ENST00000284771 BARGINQ6ZT62 677 aa28.8■■■□□ 2.2
PDLIM3-203ENST00000284771 GLI3P10071 1580 aa28.79■■■□□ 2.2
PDLIM3-203ENST00000284771 NFE2L2Q16236 605 aa28.79■■■□□ 2.2
PDLIM3-203ENST00000284771 WNK3Q9BYP7 1800 aa28.78■■■□□ 2.2
PDLIM3-203ENST00000284771 PARP4Q9UKK3 1724 aaKnown RBP28.78■■■□□ 2.2
PDLIM3-203ENST00000284771 DLG5Q8TDM6 1919 aa28.78■■■□□ 2.2
PDLIM3-203ENST00000284771 RIPK4P57078 832 aa28.77■■■□□ 2.2
PDLIM3-203ENST00000284771 PLEKHO1Q53GL0 409 aaPredicted RBP28.77■■■□□ 2.2
PDLIM3-203ENST00000284771 FAM98CQ17RN3 349 aaKnown RBP28.77■■■□□ 2.2
PDLIM3-203ENST00000284771 AMOTQ4VCS5 1084 aa28.77■■■□□ 2.2
PDLIM3-203ENST00000284771 ZNF772Q68DY9 489 aaPredicted RBP28.77■■■□□ 2.2
PDLIM3-203ENST00000284771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.77■■■□□ 2.2
PDLIM3-203ENST00000284771 PLEKHG2Q9H7P9 1386 aa28.76■■■□□ 2.19
PDLIM3-203ENST00000284771 PKD1L3Q7Z443 1732 aa28.76■■■□□ 2.19
PDLIM3-203ENST00000284771 TRIM35Q9UPQ4 493 aa28.75■■■□□ 2.19
PDLIM3-203ENST00000284771 GAS2L2Q8NHY3 880 aa28.74■■■□□ 2.19
PDLIM3-203ENST00000284771 ZCRB1Q8TBF4 217 aaKnown RBP28.74■■■□□ 2.19
PDLIM3-203ENST00000284771 PHF23Q9BUL5 403 aaPredicted RBP28.74■■■□□ 2.19
PDLIM3-203ENST00000284771 CYP27B1O15528 508 aa28.73■■■□□ 2.19
PDLIM3-203ENST00000284771 SHANK3Q9BYB0 1731 aa28.73■■■□□ 2.19
PDLIM3-203ENST00000284771 ZNF530Q6P9A1 599 aaPredicted RBP28.72■■■□□ 2.19
PDLIM3-203ENST00000284771 CDCA7Q9BWT1 371 aaPredicted RBP28.72■■■□□ 2.19
PDLIM3-203ENST00000284771 SPG7Q9UQ90 795 aa28.72■■■□□ 2.19
PDLIM3-203ENST00000284771 ONECUT3O60422 494 aaPredicted RBP28.71■■■□□ 2.19
PDLIM3-203ENST00000284771 NCBP3Q53F19 620 aaKnown RBP28.7■■■□□ 2.19
PDLIM3-203ENST00000284771 WWC1Q8IX03 1113 aa28.7■■■□□ 2.19
PDLIM3-203ENST00000284771 ZNF521Q96K83 1311 aa28.7■■■□□ 2.18
PDLIM3-203ENST00000284771 CCDC27Q2M243 656 aa28.7■■■□□ 2.18
PDLIM3-203ENST00000284771 EXOC5O00471 708 aa28.68■■■□□ 2.18
PDLIM3-203ENST00000284771 PHKG2P15735 406 aa28.68■■■□□ 2.18
PDLIM3-203ENST00000284771 DCTN1Q14203 1278 aa28.68■■■□□ 2.18
PDLIM3-203ENST00000284771 ZBED9Q6R2W3 1325 aa28.68■■■□□ 2.18
PDLIM3-203ENST00000284771 GNAT3A8MTJ3 354 aa28.67■■■□□ 2.18
PDLIM3-203ENST00000284771 AKAP4Q5JQC9 854 aa28.67■■■□□ 2.18
PDLIM3-203ENST00000284771 NGEFQ8N5V2 710 aa28.67■■■□□ 2.18
PDLIM3-203ENST00000284771 THSD7AQ9UPZ6 1657 aa28.67■■■□□ 2.18
PDLIM3-203ENST00000284771 LRRC37A3O60309 1634 aa28.67■■■□□ 2.18
PDLIM3-203ENST00000284771 POTEAQ6S8J7 498 aa28.67■■■□□ 2.18
PDLIM3-203ENST00000284771 DDX54Q8TDD1 881 aaKnown RBP28.67■■■□□ 2.18
PDLIM3-203ENST00000284771 DDB1Q16531 1140 aa28.66■■■□□ 2.18
PDLIM3-203ENST00000284771 IFNL2Q8IZJ0 200 aa28.66■■■□□ 2.18
PDLIM3-203ENST00000284771 THUMPD2Q9BTF0 503 aaKnown RBP28.66■■■□□ 2.18
PDLIM3-203ENST00000284771 MAP3K5Q99683 1374 aa28.66■■■□□ 2.18
PDLIM3-203ENST00000284771 PCDH11XQ9BZA7 1347 aa28.65■■■□□ 2.18
PDLIM3-203ENST00000284771 PCDH11YQ9BZA8 1340 aa28.65■■■□□ 2.18
PDLIM3-203ENST00000284771 MCM10Q7L590 875 aa28.65■■■□□ 2.18
PDLIM3-203ENST00000284771 IL17REQ8NFR9 667 aa28.65■■■□□ 2.18
PDLIM3-203ENST00000284771 TNS2Q63HR2 1409 aa28.65■■■□□ 2.18
PDLIM3-203ENST00000284771 RBM6P78332 1123 aaKnown RBP28.64■■■□□ 2.18
PDLIM3-203ENST00000284771 C1orf141Q5JVX7 400 aa28.64■■■□□ 2.18
PDLIM3-203ENST00000284771 LGR6Q9HBX8 967 aa28.64■■■□□ 2.18
PDLIM3-203ENST00000284771 MPRIPQ6WCQ1 1025 aa28.64■■■□□ 2.17
PDLIM3-203ENST00000284771 HTATSF1O43719 755 aaKnown RBP28.62■■■□□ 2.17
PDLIM3-203ENST00000284771 SEPT12Q8IYM1 358 aa28.61■■■□□ 2.17
PDLIM3-203ENST00000284771 SPINK5Q9NQ38 1064 aaPredicted RBP28.61■■■□□ 2.17
PDLIM3-203ENST00000284771 A0A0G2JS52 829 aa28.6■■■□□ 2.17
PDLIM3-203ENST00000284771 KDM6AO15550 1401 aaPredicted RBP28.6■■■□□ 2.17
PDLIM3-203ENST00000284771 MYT1Q01538 1121 aa28.6■■■□□ 2.17
PDLIM3-203ENST00000284771 LMOD3Q0VAK6 560 aa28.6■■■□□ 2.17
PDLIM3-203ENST00000284771 NKX1-1Q15270 411 aaPredicted RBP28.6■■■□□ 2.17
PDLIM3-203ENST00000284771 MARCH10Q8NA82 808 aaPredicted RBP28.6■■■□□ 2.17
PDLIM3-203ENST00000284771 RTF1Q92541 710 aaKnown RBP28.6■■■□□ 2.17
PDLIM3-203ENST00000284771 VIRMAQ69YN4 1812 aaKnown RBP28.59■■■□□ 2.17
PDLIM3-203ENST00000284771 CEMIPQ8WUJ3 1361 aa28.59■■■□□ 2.17
PDLIM3-203ENST00000284771 RNMTO43148 476 aaKnown RBP28.58■■■□□ 2.17
PDLIM3-203ENST00000284771 RXRBP28702 533 aa28.58■■■□□ 2.17
PDLIM3-203ENST00000284771 CDCA7LQ96GN5 454 aa28.58■■■□□ 2.17
PDLIM3-203ENST00000284771 ADAMTS7Q9UKP4 1686 aa28.58■■■□□ 2.17
PDLIM3-203ENST00000284771 WDR63Q8IWG1 891 aa28.57■■■□□ 2.16
PDLIM3-203ENST00000284771 DCAF5Q96JK2 942 aa28.56■■■□□ 2.16
PDLIM3-203ENST00000284771 SCN11AQ9UI33 1791 aa28.55■■■□□ 2.16
PDLIM3-203ENST00000284771 HSP90AB1P08238 724 aaKnown RBP28.54■■■□□ 2.16
PDLIM3-203ENST00000284771 GOLGA2Q08379 1002 aa28.54■■■□□ 2.16
PDLIM3-203ENST00000284771 BRWD3Q6RI45 1802 aa28.53■■■□□ 2.16
PDLIM3-203ENST00000284771 PDE3BQ13370 1112 aa28.52■■■□□ 2.16
PDLIM3-203ENST00000284771 FAM182BQ5T319 152 aa28.51■■■□□ 2.16
PDLIM3-203ENST00000284771 TOGARAM1Q9Y4F4 1720 aa28.51■■■□□ 2.15
PDLIM3-203ENST00000284771 ZNF853P0CG23 659 aa28.49■■■□□ 2.15
PDLIM3-203ENST00000284771 SLFN5Q08AF3 891 aa28.49■■■□□ 2.15
PDLIM3-203ENST00000284771 IL16Q14005 1332 aa28.49■■■□□ 2.15
PDLIM3-203ENST00000284771 TRMT2AQ8IZ69 625 aaKnown RBP28.48■■■□□ 2.15
PDLIM3-203ENST00000284771 NFATC2IPQ8NCF5 419 aa28.48■■■□□ 2.15
PDLIM3-203ENST00000284771 MIS18AQ9NYP9 233 aa28.48■■■□□ 2.15
PDLIM3-203ENST00000284771 RGS12O14924 1447 aa28.48■■■□□ 2.15
PDLIM3-203ENST00000284771 CFAP44Q96MT7 982 aa28.47■■■□□ 2.15
PDLIM3-203ENST00000284771 SLC52A2Q9HAB3 445 aa28.47■■■□□ 2.15
PDLIM3-203ENST00000284771 KAT6BQ8WYB5 2073 aa28.47■■■□□ 2.15
PDLIM3-203ENST00000284771 LAS1LQ9Y4W2 734 aaKnown RBP28.46■■■□□ 2.15
PDLIM3-203ENST00000284771 SIPA1L3O60292 1781 aaPredicted RBP28.46■■■□□ 2.15
PDLIM3-203ENST00000284771 ERVV-2B6SEH9 535 aa28.45■■■□□ 2.15
PDLIM3-203ENST00000284771 CHL1O00533 1208 aa28.45■■■□□ 2.15
PDLIM3-203ENST00000284771 CALD1Q05682 793 aaKnown RBP28.45■■■□□ 2.15
PDLIM3-203ENST00000284771 TEFQ10587 303 aa28.45■■■□□ 2.15
PDLIM3-203ENST00000284771 TAF7Q15545 349 aaPredicted RBP28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms