RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MSH6P52701 1360 aa31.5■■■□□ 2.63
ROM1-201ENST00000278833 C22orf23Q9BZE7 217 aa31.5■■■□□ 2.63
ROM1-201ENST00000278833 FRAT2O75474 233 aaPredicted RBP31.48■■■□□ 2.63
ROM1-201ENST00000278833 BMP2KLQ5H9B9 411 aa31.48■■■□□ 2.63
ROM1-201ENST00000278833 ADGRL3Q9HAR2 1447 aa31.48■■■□□ 2.63
ROM1-201ENST00000278833 C8orf58Q8NAV2 365 aa31.47■■■□□ 2.63
ROM1-201ENST00000278833 RBM25P49756 843 aaKnown RBP31.45■■■□□ 2.63
ROM1-201ENST00000278833 RGS12O14924 1447 aa31.44■■■□□ 2.62
ROM1-201ENST00000278833 CHL1O00533 1208 aa31.43■■■□□ 2.62
ROM1-201ENST00000278833 UBAP1LF5GYI3 381 aa31.42■■■□□ 2.62
ROM1-201ENST00000278833 ANKARQ7Z5J8 1434 aa31.42■■■□□ 2.62
ROM1-201ENST00000278833 LRRC37A3O60309 1634 aa31.41■■■□□ 2.62
ROM1-201ENST00000278833 KDRP35968 1356 aa31.41■■■□□ 2.62
ROM1-201ENST00000278833 ATF3P18847 181 aa31.41■■■□□ 2.62
ROM1-201ENST00000278833 INTS3Q68E01 1043 aaKnown RBP31.41■■■□□ 2.62
ROM1-201ENST00000278833 PIK3C2AO00443 1686 aa31.41■■■□□ 2.62
ROM1-201ENST00000278833 CRB1P82279 1406 aa31.41■■■□□ 2.62
ROM1-201ENST00000278833 TOM1O60784 492 aa31.4■■■□□ 2.62
ROM1-201ENST00000278833 SULT6B1Q6IMI4 303 aa31.4■■■□□ 2.62
ROM1-201ENST00000278833 CADPS2Q86UW7 1296 aa31.4■■■□□ 2.62
ROM1-201ENST00000278833 SBNO1A3KN83 1393 aa31.4■■■□□ 2.62
ROM1-201ENST00000278833 FAM83GA6ND36 823 aa31.4■■■□□ 2.62
ROM1-201ENST00000278833 MFAP1P55081 439 aaKnown RBP31.4■■■□□ 2.62
ROM1-201ENST00000278833 LNPKQ9C0E8 428 aa31.4■■■□□ 2.62
ROM1-201ENST00000278833 AEBP1Q8IUX7 1158 aa31.39■■■□□ 2.62
ROM1-201ENST00000278833 DCCP43146 1447 aa31.39■■■□□ 2.62
ROM1-201ENST00000278833 FLT4P35916 1363 aa31.38■■■□□ 2.61
ROM1-201ENST00000278833 SIRT2Q8IXJ6 389 aa31.38■■■□□ 2.61
ROM1-201ENST00000278833 MARF1Q9Y4F3 1742 aaKnown RBP31.36■■■□□ 2.61
ROM1-201ENST00000278833 PTPRCP08575 1304 aa31.36■■■□□ 2.61
ROM1-201ENST00000278833 SNX21Q969T3 373 aa31.36■■■□□ 2.61
ROM1-201ENST00000278833 EIF5BO60841 1220 aaKnown RBP31.35■■■□□ 2.61
ROM1-201ENST00000278833 ATP10DQ9P241 1426 aa31.35■■■□□ 2.61
ROM1-201ENST00000278833 RGPD8O14715 1765 aaPredicted RBP31.35■■■□□ 2.61
ROM1-201ENST00000278833 SLAIN2Q9P270 581 aa31.34■■■□□ 2.61
ROM1-201ENST00000278833 SLKQ9H2G2 1235 aaPredicted RBP31.33■■■□□ 2.61
ROM1-201ENST00000278833 ELL2O00472 640 aaPredicted RBP31.32■■■□□ 2.6
ROM1-201ENST00000278833 DCTN1Q14203 1278 aa31.32■■■□□ 2.6
ROM1-201ENST00000278833 PIP4K2BP78356 416 aa31.31■■■□□ 2.6
ROM1-201ENST00000278833 ANKRD45Q5TZF3 282 aa31.31■■■□□ 2.6
ROM1-201ENST00000278833 HSP90AB2PQ58FF8 381 aa31.3■■■□□ 2.6
ROM1-201ENST00000278833 MAP3K19Q56UN5 1328 aa31.3■■■□□ 2.6
ROM1-201ENST00000278833 IGSF1Q8N6C5 1336 aa31.3■■■□□ 2.6
ROM1-201ENST00000278833 NUTM2FA1L443 756 aa31.29■■■□□ 2.6
ROM1-201ENST00000278833 DCTPP1Q9H773 170 aa31.29■■■□□ 2.6
ROM1-201ENST00000278833 MST1RQ04912 1400 aa31.29■■■□□ 2.6
ROM1-201ENST00000278833 C1orf115Q9H7X2 142 aa31.29■■■□□ 2.6
ROM1-201ENST00000278833 N4BP2Q86UW6 1770 aaPredicted RBP31.29■■■□□ 2.6
ROM1-201ENST00000278833 CHMP5Q9NZZ3 219 aa31.28■■■□□ 2.6
ROM1-201ENST00000278833 RTL1A6NKG5 1358 aa31.28■■■□□ 2.6
ROM1-201ENST00000278833 HSCBQ8IWL3 235 aa31.27■■■□□ 2.6
ROM1-201ENST00000278833 ANKRD44Q8N8A2 993 aa31.27■■■□□ 2.6
ROM1-201ENST00000278833 FBXO41Q8TF61 875 aa31.27■■■□□ 2.6
ROM1-201ENST00000278833 RPAP2Q8IXW5 612 aaPredicted RBP31.27■■■□□ 2.6
ROM1-201ENST00000278833 HTATSF1O43719 755 aaKnown RBP31.25■■■□□ 2.59
ROM1-201ENST00000278833 FAM208AQ9UK61 1670 aaKnown RBP31.24■■■□□ 2.59
ROM1-201ENST00000278833 C1orf167Q5SNV9 1468 aa31.24■■■□□ 2.59
ROM1-201ENST00000278833 DDIT3P35638 169 aa31.23■■■□□ 2.59
ROM1-201ENST00000278833 CACNA1FO60840 1977 aa31.23■■■□□ 2.59
ROM1-201ENST00000278833 MCM10Q7L590 875 aa31.22■■■□□ 2.59
ROM1-201ENST00000278833 GAS2L2Q8NHY3 880 aa31.22■■■□□ 2.59
ROM1-201ENST00000278833 SOS1Q07889 1333 aaPredicted RBP31.22■■■□□ 2.59
ROM1-201ENST00000278833 CDC45O75419 566 aa31.21■■■□□ 2.59
ROM1-201ENST00000278833 TBC1D9Q6ZT07 1266 aa31.2■■■□□ 2.58
ROM1-201ENST00000278833 ORAI2Q96SN7 254 aa31.2■■■□□ 2.58
ROM1-201ENST00000278833 CIZ1Q9ULV3 898 aaPredicted RBP31.19■■■□□ 2.58
ROM1-201ENST00000278833 BRINP3Q76B58 766 aa31.18■■■□□ 2.58
ROM1-201ENST00000278833 CEP85Q6P2H3 762 aa31.17■■■□□ 2.58
ROM1-201ENST00000278833 PLEKHM2Q8IWE5 1019 aa31.17■■■□□ 2.58
ROM1-201ENST00000278833 KIF2CQ99661 725 aa31.17■■■□□ 2.58
ROM1-201ENST00000278833 ROBO1Q9Y6N7 1651 aa31.17■■■□□ 2.58
ROM1-201ENST00000278833 MTHFSDQ2M296 383 aaKnown RBP31.16■■■□□ 2.58
ROM1-201ENST00000278833 ESCO1Q5FWF5 840 aa31.16■■■□□ 2.58
ROM1-201ENST00000278833 MCM4P33991 863 aa31.15■■■□□ 2.58
ROM1-201ENST00000278833 KRT24Q2M2I5 525 aa31.15■■■□□ 2.58
ROM1-201ENST00000278833 NGDNQ8NEJ9 315 aaKnown RBP31.15■■■□□ 2.58
ROM1-201ENST00000278833 BABAM1Q9NWV8 329 aa31.15■■■□□ 2.58
ROM1-201ENST00000278833 TTC22Q5TAA0 569 aa31.14■■■□□ 2.58
ROM1-201ENST00000278833 RTF1Q92541 710 aaKnown RBP31.14■■■□□ 2.58
ROM1-201ENST00000278833 GSPT1P15170 499 aaKnown RBP31.13■■■□□ 2.57
ROM1-201ENST00000278833 EYA1Q99502 592 aa31.13■■■□□ 2.57
ROM1-201ENST00000278833 PHRF1Q9P1Y6 1649 aaKnown RBP31.12■■■□□ 2.57
ROM1-201ENST00000278833 PXDNLA1KZ92 1463 aa31.12■■■□□ 2.57
ROM1-201ENST00000278833 CCT4P50991 539 aaKnown RBP31.12■■■□□ 2.57
ROM1-201ENST00000278833 TSPYL4Q9UJ04 414 aa31.1■■■□□ 2.57
ROM1-201ENST00000278833 AMPHP49418 695 aa31.1■■■□□ 2.57
ROM1-201ENST00000278833 DDX17Q92841 729 aaKnown RBP31.07■■■□□ 2.56
ROM1-201ENST00000278833 TUBGCP6Q96RT7 1819 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 MED1Q15648 1581 aaPredicted RBP31.06■■■□□ 2.56
ROM1-201ENST00000278833 HMMRO75330 724 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 SLC4A2P04920 1241 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 HOXC9P31274 260 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 IL27Q8NEV9 243 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 PHF8Q9UPP1 1060 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 LTN1O94822 1766 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 DDX11L8A8MPP1 907 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 L1TD1Q5T7N2 865 aaKnown RBP31.06■■■□□ 2.56
ROM1-201ENST00000278833 MEIS3Q99687 375 aa31.06■■■□□ 2.56
ROM1-201ENST00000278833 FOXO3O43524 673 aa31.05■■■□□ 2.56
ROM1-201ENST00000278833 ILDR1Q86SU0 546 aaPredicted RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms