RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 MBIPQ9NS73 344 aa25.15■■□□□ 1.62
C11orf49-201ENST00000278460 CRB1P82279 1406 aa25.15■■□□□ 1.62
C11orf49-201ENST00000278460 PDE3AQ14432 1141 aa25.14■■□□□ 1.61
C11orf49-201ENST00000278460 RTF1Q92541 710 aaKnown RBP25.14■■□□□ 1.61
C11orf49-201ENST00000278460 MCM10Q7L590 875 aa25.13■■□□□ 1.61
C11orf49-201ENST00000278460 AHDC1Q5TGY3 1603 aaPredicted RBP25.13■■□□□ 1.61
C11orf49-201ENST00000278460 CCDC136Q96JN2 1154 aa25.12■■□□□ 1.61
C11orf49-201ENST00000278460 MAP3K5Q99683 1374 aa25.12■■□□□ 1.61
C11orf49-201ENST00000278460 GNAT3A8MTJ3 354 aa25.12■■□□□ 1.61
C11orf49-201ENST00000278460 KIAA0232Q92628 1395 aa25.11■■□□□ 1.61
C11orf49-201ENST00000278460 CHL1O00533 1208 aa25.1■■□□□ 1.61
C11orf49-201ENST00000278460 CANXP27824 592 aaKnown RBP25.1■■□□□ 1.61
C11orf49-201ENST00000278460 ALDH1L2Q3SY69 923 aa25.1■■□□□ 1.61
C11orf49-201ENST00000278460 SSH1Q8WYL5 1049 aa25.08■■□□□ 1.6
C11orf49-201ENST00000278460 BCL2L13Q9BXK5 485 aa25.08■■□□□ 1.6
C11orf49-201ENST00000278460 SMC4Q9NTJ3 1288 aa25.08■■□□□ 1.6
C11orf49-201ENST00000278460 FRAT1Q92837 279 aaPredicted RBP25.07■■□□□ 1.6
C11orf49-201ENST00000278460 VAMP4O75379 141 aa25.06■■□□□ 1.6
C11orf49-201ENST00000278460 AMOTQ4VCS5 1084 aa25.06■■□□□ 1.6
C11orf49-201ENST00000278460 PLEKHO1Q53GL0 409 aaPredicted RBP25.06■■□□□ 1.6
C11orf49-201ENST00000278460 BRPF1P55201 1214 aaPredicted RBP25.05■■□□□ 1.6
C11orf49-201ENST00000278460 COL22A1Q8NFW1 1626 aaPredicted RBP25.05■■□□□ 1.6
C11orf49-201ENST00000278460 PLEKHG2Q9H7P9 1386 aa25.05■■□□□ 1.6
C11orf49-201ENST00000278460 CHRNA2Q15822 529 aa25.04■■□□□ 1.6
C11orf49-201ENST00000278460 TWISTNBQ3B726 338 aaPredicted RBP25.04■■□□□ 1.6
C11orf49-201ENST00000278460 ZKSCAN2Q63HK3 967 aa25.04■■□□□ 1.6
C11orf49-201ENST00000278460 MS4A1P11836 297 aa25.03■■□□□ 1.6
C11orf49-201ENST00000278460 TSPYL6Q8N831 410 aa25.03■■□□□ 1.6
C11orf49-201ENST00000278460 KIF16BQ96L93 1317 aa25.03■■□□□ 1.6
C11orf49-201ENST00000278460 CACNA1FO60840 1977 aa25.03■■□□□ 1.6
C11orf49-201ENST00000278460 ADAMTS7Q9UKP4 1686 aa25.02■■□□□ 1.6
C11orf49-201ENST00000278460 C8orf58Q8NAV2 365 aa25.02■■□□□ 1.6
C11orf49-201ENST00000278460 PKD1L3Q7Z443 1732 aa25.02■■□□□ 1.6
C11orf49-201ENST00000278460 HAP1P54257 671 aaPredicted RBP25.01■■□□□ 1.59
C11orf49-201ENST00000278460 IL17REQ8NFR9 667 aa25.01■■□□□ 1.59
C11orf49-201ENST00000278460 BABAM1Q9NWV8 329 aa25.01■■□□□ 1.59
C11orf49-201ENST00000278460 KDM3BQ7LBC6 1761 aa25.01■■□□□ 1.59
C11orf49-201ENST00000278460 CEMIPQ8WUJ3 1361 aa25.01■■□□□ 1.59
C11orf49-201ENST00000278460 AKAP4Q5JQC9 854 aa25.01■■□□□ 1.59
C11orf49-201ENST00000278460 PRDM11Q9NQV5 511 aa25.01■■□□□ 1.59
C11orf49-201ENST00000278460 NLRP2Q9NX02 1062 aa25.01■■□□□ 1.59
C11orf49-201ENST00000278460 PHLPP1O60346 1717 aa25■■□□□ 1.59
C11orf49-201ENST00000278460 OVOS2A0A0G2JMS6 1433 aa25■■□□□ 1.59
C11orf49-201ENST00000278460 PANK1Q8TE04 598 aa25■■□□□ 1.59
C11orf49-201ENST00000278460 SIPA1L3O60292 1781 aaPredicted RBP25■■□□□ 1.59
C11orf49-201ENST00000278460 ZNF530Q6P9A1 599 aaPredicted RBP24.99■■□□□ 1.59
C11orf49-201ENST00000278460 TSPYL4Q9UJ04 414 aa24.99■■□□□ 1.59
C11orf49-201ENST00000278460 SCN11AQ9UI33 1791 aa24.99■■□□□ 1.59
C11orf49-201ENST00000278460 PARP4Q9UKK3 1724 aaKnown RBP24.99■■□□□ 1.59
C11orf49-201ENST00000278460 IPO8O15397 1037 aaKnown RBP24.98■■□□□ 1.59
C11orf49-201ENST00000278460 CSB-PGBD3P0DP91 1061 aa24.98■■□□□ 1.59
C11orf49-201ENST00000278460 AAMPQ13685 434 aa24.97■■□□□ 1.59
C11orf49-201ENST00000278460 ATF7IPQ6VMQ6 1270 aa24.97■■□□□ 1.59
C11orf49-201ENST00000278460 MRPL50Q8N5N7 158 aaKnown RBP24.97■■□□□ 1.59
C11orf49-201ENST00000278460 RAPGEF4Q8WZA2 1011 aa24.97■■□□□ 1.59
C11orf49-201ENST00000278460 COL5A2P05997 1499 aaPredicted RBP24.97■■□□□ 1.59
C11orf49-201ENST00000278460 ELL2O00472 640 aaPredicted RBP24.96■■□□□ 1.59
C11orf49-201ENST00000278460 RLBP1P12271 317 aa24.96■■□□□ 1.59
C11orf49-201ENST00000278460 TAF7Q15545 349 aaPredicted RBP24.96■■□□□ 1.59
C11orf49-201ENST00000278460 DZIP1LQ8IYY4 767 aaKnown RBP24.96■■□□□ 1.59
C11orf49-201ENST00000278460 NOB1Q9ULX3 412 aaKnown RBP24.96■■□□□ 1.59
C11orf49-201ENST00000278460 TNNQ9UQP3 1299 aa24.96■■□□□ 1.59
C11orf49-201ENST00000278460 COG6Q9Y2V7 657 aa24.96■■□□□ 1.59
C11orf49-201ENST00000278460 COL16A1Q07092 1604 aaPredicted RBP24.96■■□□□ 1.59
C11orf49-201ENST00000278460 C1orf141Q5JVX7 400 aa24.95■■□□□ 1.58
C11orf49-201ENST00000278460 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.58
C11orf49-201ENST00000278460 MEGF6O75095 1541 aa24.95■■□□□ 1.58
C11orf49-201ENST00000278460 WDR17Q8IZU2 1322 aa24.95■■□□□ 1.58
C11orf49-201ENST00000278460 TRIM27P14373 513 aa24.94■■□□□ 1.58
C11orf49-201ENST00000278460 TATP17735 454 aaPredicted RBP24.94■■□□□ 1.58
C11orf49-201ENST00000278460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.94■■□□□ 1.58
C11orf49-201ENST00000278460 MIS18AQ9NYP9 233 aa24.94■■□□□ 1.58
C11orf49-201ENST00000278460 FTSJ3Q8IY81 847 aaKnown RBP24.93■■□□□ 1.58
C11orf49-201ENST00000278460 ARHGAP45Q92619 1136 aa24.93■■□□□ 1.58
C11orf49-201ENST00000278460 CLUAP1Q96AJ1 413 aa24.92■■□□□ 1.58
C11orf49-201ENST00000278460 SOS1Q07889 1333 aaPredicted RBP24.92■■□□□ 1.58
C11orf49-201ENST00000278460 MVPQ14764 893 aaKnown RBP24.91■■□□□ 1.58
C11orf49-201ENST00000278460 KRT24Q2M2I5 525 aa24.91■■□□□ 1.58
C11orf49-201ENST00000278460 RNMTO43148 476 aaKnown RBP24.9■■□□□ 1.58
C11orf49-201ENST00000278460 LGR6Q9HBX8 967 aa24.9■■□□□ 1.58
C11orf49-201ENST00000278460 SPG7Q9UQ90 795 aa24.9■■□□□ 1.58
C11orf49-201ENST00000278460 TOM1O60784 492 aa24.9■■□□□ 1.58
C11orf49-201ENST00000278460 MPRIPQ6WCQ1 1025 aa24.87■■□□□ 1.57
C11orf49-201ENST00000278460 TEFQ10587 303 aa24.86■■□□□ 1.57
C11orf49-201ENST00000278460 KDM2BQ8NHM5 1336 aa24.86■■□□□ 1.57
C11orf49-201ENST00000278460 TOM1L2Q6ZVM7 507 aa24.86■■□□□ 1.57
C11orf49-201ENST00000278460 CARD10Q9BWT7 1032 aa24.86■■□□□ 1.57
C11orf49-201ENST00000278460 SHANK3Q9BYB0 1731 aa24.85■■□□□ 1.57
C11orf49-201ENST00000278460 CENPQQ7L2Z9 268 aaPredicted RBP24.85■■□□□ 1.57
C11orf49-201ENST00000278460 DDX19BQ9UMR2 479 aa24.85■■□□□ 1.57
C11orf49-201ENST00000278460 TCERG1O14776 1098 aaKnown RBP24.84■■□□□ 1.57
C11orf49-201ENST00000278460 PHKG2P15735 406 aa24.83■■□□□ 1.57
C11orf49-201ENST00000278460 IFNL2Q8IZJ0 200 aa24.83■■□□□ 1.57
C11orf49-201ENST00000278460 TMEM57Q8N5G2 664 aa24.83■■□□□ 1.57
C11orf49-201ENST00000278460 API5Q9BZZ5 524 aaKnown RBP24.83■■□□□ 1.57
C11orf49-201ENST00000278460 PLCH1Q4KWH8 1693 aa24.83■■□□□ 1.57
C11orf49-201ENST00000278460 EVA1CP58658 441 aa24.82■■□□□ 1.56
C11orf49-201ENST00000278460 ABCC4O15439 1325 aa24.82■■□□□ 1.56
C11orf49-201ENST00000278460 KDM6AO15550 1401 aaPredicted RBP24.82■■□□□ 1.56
C11orf49-201ENST00000278460 MRC1P22897 1456 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms