RNA–Protein interactions for RNA: ENST00000276105.3

SNX12-201, Transcript of sorting nexin 12, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene SNX12, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-201ENST00000276105 SLC27A3Q5K4L6 730 aa13.99□□□□□ -0.17
SNX12-201ENST00000276105 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
SNX12-201ENST00000276105 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
SNX12-201ENST00000276105 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
SNX12-201ENST00000276105 MEGF6O75095 1541 aa13.99□□□□□ -0.17
SNX12-201ENST00000276105 HSP90AB2PQ58FF8 381 aa13.98□□□□□ -0.17
SNX12-201ENST00000276105 PPP1R1BQ9UD71 204 aaPredicted RBP13.98□□□□□ -0.17
SNX12-201ENST00000276105 SHANK3Q9BYB0 1731 aa13.98□□□□□ -0.17
SNX12-201ENST00000276105 PAPPAQ13219 1627 aa13.97□□□□□ -0.17
SNX12-201ENST00000276105 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
SNX12-201ENST00000276105 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
SNX12-201ENST00000276105 HMGB2P26583 209 aaKnown RBP13.96□□□□□ -0.17
SNX12-201ENST00000276105 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
SNX12-201ENST00000276105 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
SNX12-201ENST00000276105 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
SNX12-201ENST00000276105 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
SNX12-201ENST00000276105 PRIM1P49642 420 aaKnown RBP13.95□□□□□ -0.18
SNX12-201ENST00000276105 EMILIN1Q9Y6C2 1016 aa13.95□□□□□ -0.18
SNX12-201ENST00000276105 NCAPD2Q15021 1401 aa13.95□□□□□ -0.18
SNX12-201ENST00000276105 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
SNX12-201ENST00000276105 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
SNX12-201ENST00000276105 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
SNX12-201ENST00000276105 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
SNX12-201ENST00000276105 NSD2O96028 1365 aa13.94□□□□□ -0.18
SNX12-201ENST00000276105 USHBP1Q8N6Y0 703 aa13.93□□□□□ -0.18
SNX12-201ENST00000276105 SYTL4Q96C24 671 aaPredicted RBP13.93□□□□□ -0.18
SNX12-201ENST00000276105 LRRC4BQ9NT99 713 aa13.93□□□□□ -0.18
SNX12-201ENST00000276105 PLEKHG2Q9H7P9 1386 aa13.93□□□□□ -0.18
SNX12-201ENST00000276105 LY75O60449 1722 aa13.93□□□□□ -0.18
SNX12-201ENST00000276105 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
SNX12-201ENST00000276105 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
SNX12-201ENST00000276105 ZBTB7AO95365 584 aa13.92□□□□□ -0.18
SNX12-201ENST00000276105 PTGER2P43116 358 aa13.92□□□□□ -0.18
SNX12-201ENST00000276105 C1QTNF8P60827 252 aa13.92□□□□□ -0.18
SNX12-201ENST00000276105 POLR3GLQ9BT43 218 aa13.92□□□□□ -0.18
SNX12-201ENST00000276105 PDGFDQ9GZP0 370 aaPredicted RBP13.92□□□□□ -0.18
SNX12-201ENST00000276105 POLKQ9UBT6 870 aa13.92□□□□□ -0.18
SNX12-201ENST00000276105 PKD1L3Q7Z443 1732 aa13.91□□□□□ -0.18
SNX12-201ENST00000276105 PPM1GO15355 546 aaPredicted RBP13.91□□□□□ -0.18
SNX12-201ENST00000276105 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
SNX12-201ENST00000276105 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
SNX12-201ENST00000276105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNX12-201ENST00000276105 PANK3Q9H999 370 aa13.9□□□□□ -0.18
SNX12-201ENST00000276105 SPG7Q9UQ90 795 aa13.9□□□□□ -0.18
SNX12-201ENST00000276105 ZNF827Q17R98 1081 aa13.89□□□□□ -0.19
SNX12-201ENST00000276105 EYA1Q99502 592 aa13.89□□□□□ -0.19
SNX12-201ENST00000276105 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
SNX12-201ENST00000276105 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
SNX12-201ENST00000276105 CEP350Q5VT06 3117 aa13.88□□□□□ -0.19
SNX12-201ENST00000276105 CYP27B1O15528 508 aa13.88□□□□□ -0.19
SNX12-201ENST00000276105 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
SNX12-201ENST00000276105 CCNL1Q9UK58 526 aaPredicted RBP13.88□□□□□ -0.19
SNX12-201ENST00000276105 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
SNX12-201ENST00000276105 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
SNX12-201ENST00000276105 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
SNX12-201ENST00000276105 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
SNX12-201ENST00000276105 PNPLA7Q6ZV29 1317 aa13.86□□□□□ -0.19
SNX12-201ENST00000276105 COL24A1Q17RW2 1714 aa13.85□□□□□ -0.19
SNX12-201ENST00000276105 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
SNX12-201ENST00000276105 ARXQ96QS3 562 aa13.85□□□□□ -0.19
SNX12-201ENST00000276105 PCDH10Q9P2E7 1040 aa13.85□□□□□ -0.19
SNX12-201ENST00000276105 KNSTRNQ9Y448 316 aa13.85□□□□□ -0.19
SNX12-201ENST00000276105 ITGB4P16144 1822 aa13.85□□□□□ -0.19
SNX12-201ENST00000276105 PALLDQ8WX93 1383 aa13.84□□□□□ -0.19
SNX12-201ENST00000276105 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
SNX12-201ENST00000276105 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
SNX12-201ENST00000276105 IFNL2Q8IZJ0 200 aa13.84□□□□□ -0.19
SNX12-201ENST00000276105 SYT17Q9BSW7 474 aa13.84□□□□□ -0.19
SNX12-201ENST00000276105 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
SNX12-201ENST00000276105 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
SNX12-201ENST00000276105 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
SNX12-201ENST00000276105 POLD1P28340 1107 aa13.83□□□□□ -0.2
SNX12-201ENST00000276105 MORC1Q86VD1 984 aa13.83□□□□□ -0.2
SNX12-201ENST00000276105 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
SNX12-201ENST00000276105 TOGARAM1Q9Y4F4 1720 aa13.83□□□□□ -0.2
SNX12-201ENST00000276105 C5P01031 1676 aa13.82□□□□□ -0.2
SNX12-201ENST00000276105 PHKG2P15735 406 aa13.82□□□□□ -0.2
SNX12-201ENST00000276105 KCNQ4P56696 695 aa13.82□□□□□ -0.2
SNX12-201ENST00000276105 TAF1LQ8IZX4 1826 aa13.81□□□□□ -0.2
SNX12-201ENST00000276105 HSP90AB1P08238 724 aaKnown RBP13.81□□□□□ -0.2
SNX12-201ENST00000276105 PIGBQ92521 554 aa13.81□□□□□ -0.2
SNX12-201ENST00000276105 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
SNX12-201ENST00000276105 AMOTQ4VCS5 1084 aa13.8□□□□□ -0.2
SNX12-201ENST00000276105 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
SNX12-201ENST00000276105 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
SNX12-201ENST00000276105 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
SNX12-201ENST00000276105 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
SNX12-201ENST00000276105 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
SNX12-201ENST00000276105 DCAF5Q96JK2 942 aa13.78□□□□□ -0.2
SNX12-201ENST00000276105 LOC102724428A0A0B4J2F2 783 aa13.77□□□□□ -0.21
SNX12-201ENST00000276105 C4BP0C0L5 1744 aa13.77□□□□□ -0.21
SNX12-201ENST00000276105 KDRP35968 1356 aa13.77□□□□□ -0.21
SNX12-201ENST00000276105 SIK1P57059 783 aa13.77□□□□□ -0.21
SNX12-201ENST00000276105 PER1O15534 1290 aaPredicted RBP13.76□□□□□ -0.21
SNX12-201ENST00000276105 MSH5O43196 834 aa13.76□□□□□ -0.21
SNX12-201ENST00000276105 AK7Q96M32 723 aa13.76□□□□□ -0.21
SNX12-201ENST00000276105 NPC1L1Q9UHC9 1359 aa13.75□□□□□ -0.21
SNX12-201ENST00000276105 IL13P35225 146 aa13.75□□□□□ -0.21
SNX12-201ENST00000276105 ZNF831Q5JPB2 1677 aa13.75□□□□□ -0.21
SNX12-201ENST00000276105 UBR3Q6ZT12 1888 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms