RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 GNL2Q13823 731 aaKnown RBP17.42■□□□□ 0.38
TMEM47-201ENST00000275954 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 MCM4P33991 863 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
TMEM47-201ENST00000275954 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
TMEM47-201ENST00000275954 GCP02774 474 aa17.41■□□□□ 0.38
TMEM47-201ENST00000275954 TOMM22Q9NS69 142 aa17.41■□□□□ 0.38
TMEM47-201ENST00000275954 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
TMEM47-201ENST00000275954 FOSBP53539 338 aa17.4■□□□□ 0.38
TMEM47-201ENST00000275954 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
TMEM47-201ENST00000275954 CAVIN1Q6NZI2 390 aaKnown RBP17.4■□□□□ 0.38
TMEM47-201ENST00000275954 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
TMEM47-201ENST00000275954 RABEP1Q15276 862 aa17.4■□□□□ 0.38
TMEM47-201ENST00000275954 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.37
TMEM47-201ENST00000275954 CCDC27Q2M243 656 aa17.39■□□□□ 0.37
TMEM47-201ENST00000275954 UPF3BQ9BZI7 483 aaKnown RBP17.39■□□□□ 0.37
TMEM47-201ENST00000275954 ERC2O15083 957 aa17.39■□□□□ 0.37
TMEM47-201ENST00000275954 HSP90AB4PQ58FF6 505 aa17.39■□□□□ 0.37
TMEM47-201ENST00000275954 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
TMEM47-201ENST00000275954 MEIS3Q99687 375 aa17.38■□□□□ 0.37
TMEM47-201ENST00000275954 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
TMEM47-201ENST00000275954 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
TMEM47-201ENST00000275954 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
TMEM47-201ENST00000275954 MAST1Q9Y2H9 1570 aa17.38■□□□□ 0.37
TMEM47-201ENST00000275954 BTG4Q9NY30 223 aa17.37■□□□□ 0.37
TMEM47-201ENST00000275954 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
TMEM47-201ENST00000275954 VAMP4O75379 141 aa17.37■□□□□ 0.37
TMEM47-201ENST00000275954 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
TMEM47-201ENST00000275954 TMEM94Q12767 1356 aa17.37■□□□□ 0.37
TMEM47-201ENST00000275954 EIF2AK4Q9P2K8 1649 aaKnown RBP17.37■□□□□ 0.37
TMEM47-201ENST00000275954 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
TMEM47-201ENST00000275954 TBC1D32Q96NH3 1257 aa17.37■□□□□ 0.37
TMEM47-201ENST00000275954 CDC42BPAQ5VT25 1732 aa17.37■□□□□ 0.37
TMEM47-201ENST00000275954 PTPRTO14522 1441 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 H3BQV1 296 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 IFFO2Q5TF58 517 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 TBC1D9Q6ZT07 1266 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 FAM184AQ8NB25 1140 aa17.36■□□□□ 0.37
TMEM47-201ENST00000275954 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
TMEM47-201ENST00000275954 MLH3Q9UHC1 1453 aa17.35■□□□□ 0.37
TMEM47-201ENST00000275954 CNTROBQ8N137 903 aa17.35■□□□□ 0.37
TMEM47-201ENST00000275954 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
TMEM47-201ENST00000275954 KDM5CP41229 1560 aa17.35■□□□□ 0.37
TMEM47-201ENST00000275954 FLIIQ13045 1269 aa17.35■□□□□ 0.37
TMEM47-201ENST00000275954 IL16Q14005 1332 aa17.35■□□□□ 0.37
TMEM47-201ENST00000275954 DNAJC2Q99543 621 aaKnown RBP17.34■□□□□ 0.37
TMEM47-201ENST00000275954 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
TMEM47-201ENST00000275954 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
TMEM47-201ENST00000275954 ISY1Q9ULR0 285 aaKnown RBP17.34■□□□□ 0.37
TMEM47-201ENST00000275954 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
TMEM47-201ENST00000275954 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.36
TMEM47-201ENST00000275954 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
TMEM47-201ENST00000275954 PRDM15P57071 1507 aaPredicted RBP17.33■□□□□ 0.36
TMEM47-201ENST00000275954 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.36
TMEM47-201ENST00000275954 MPNDQ8N594 471 aa17.33■□□□□ 0.36
TMEM47-201ENST00000275954 MRPL50Q8N5N7 158 aaKnown RBP17.33■□□□□ 0.36
TMEM47-201ENST00000275954 TULP1O00294 542 aaPredicted RBP17.32■□□□□ 0.36
TMEM47-201ENST00000275954 ARHGEF5Q12774 1597 aa17.32■□□□□ 0.36
TMEM47-201ENST00000275954 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
TMEM47-201ENST00000275954 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
TMEM47-201ENST00000275954 LARP6Q9BRS8 491 aaKnown RBP17.32■□□□□ 0.36
TMEM47-201ENST00000275954 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
TMEM47-201ENST00000275954 APPP05067 770 aa17.32■□□□□ 0.36
TMEM47-201ENST00000275954 MRE11P49959 708 aa17.32■□□□□ 0.36
TMEM47-201ENST00000275954 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
TMEM47-201ENST00000275954 ROBO2Q9HCK4 1378 aa17.31■□□□□ 0.36
TMEM47-201ENST00000275954 NUCB1Q02818 461 aa17.31■□□□□ 0.36
TMEM47-201ENST00000275954 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
TMEM47-201ENST00000275954 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
TMEM47-201ENST00000275954 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
TMEM47-201ENST00000275954 EXOC5O00471 708 aa17.31■□□□□ 0.36
TMEM47-201ENST00000275954 MTHFSDQ2M296 383 aaKnown RBP17.3■□□□□ 0.36
TMEM47-201ENST00000275954 BMP2KLQ5H9B9 411 aa17.3■□□□□ 0.36
TMEM47-201ENST00000275954 MX1P20591 662 aa17.3■□□□□ 0.36
TMEM47-201ENST00000275954 NASPP49321 788 aaPredicted RBP17.3■□□□□ 0.36
TMEM47-201ENST00000275954 AACSQ86V21 672 aa17.3■□□□□ 0.36
TMEM47-201ENST00000275954 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
TMEM47-201ENST00000275954 FIBPO43427 364 aa17.3■□□□□ 0.36
TMEM47-201ENST00000275954 RNF20Q5VTR2 975 aa17.3■□□□□ 0.36
TMEM47-201ENST00000275954 PHF14O94880 888 aa17.29■□□□□ 0.36
TMEM47-201ENST00000275954 EYA1Q99502 592 aa17.29■□□□□ 0.36
TMEM47-201ENST00000275954 HTATSF1O43719 755 aaKnown RBP17.28■□□□□ 0.36
TMEM47-201ENST00000275954 CSPP1Q1MSJ5 1256 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 ZMYM4Q5VZL5 1548 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 G3V3G9 751 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 SSFA2P28290 1259 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 KDM4AO75164 1064 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 FBXW7Q969H0 707 aa17.28■□□□□ 0.36
TMEM47-201ENST00000275954 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.36
TMEM47-201ENST00000275954 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.36
TMEM47-201ENST00000275954 STK3Q13188 491 aa17.27■□□□□ 0.35
TMEM47-201ENST00000275954 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms