RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 PTF1AQ7RTS3 328 aa23.84■■□□□ 1.41
SEC22C-202ENST00000273156 PPP2R1AP30153 589 aa23.84■■□□□ 1.41
SEC22C-202ENST00000273156 NBPF6Q5VWK0 638 aa23.84■■□□□ 1.41
SEC22C-202ENST00000273156 DDX54Q8TDD1 881 aaKnown RBP23.84■■□□□ 1.41
SEC22C-202ENST00000273156 RAPGEF4Q8WZA2 1011 aa23.84■■□□□ 1.41
SEC22C-202ENST00000273156 NBPF4Q96M43 638 aa23.84■■□□□ 1.41
SEC22C-202ENST00000273156 NSD2O96028 1365 aa23.83■■□□□ 1.41
SEC22C-202ENST00000273156 ZCRB1Q8TBF4 217 aaKnown RBP23.83■■□□□ 1.41
SEC22C-202ENST00000273156 KIF20BQ96Q89 1820 aa23.83■■□□□ 1.41
SEC22C-202ENST00000273156 RREB1Q92766 1687 aa23.82■■□□□ 1.4
SEC22C-202ENST00000273156 RGPD3A6NKT7 1758 aaPredicted RBP23.82■■□□□ 1.4
SEC22C-202ENST00000273156 RGPD4Q7Z3J3 1758 aa23.82■■□□□ 1.4
SEC22C-202ENST00000273156 MORC1Q86VD1 984 aa23.82■■□□□ 1.4
SEC22C-202ENST00000273156 PNISRQ8TF01 805 aaKnown RBP23.82■■□□□ 1.4
SEC22C-202ENST00000273156 KCNQ2O43526 872 aa23.81■■□□□ 1.4
SEC22C-202ENST00000273156 ACSBG1Q96GR2 724 aa23.81■■□□□ 1.4
SEC22C-202ENST00000273156 SBF2Q86WG5 1849 aa23.81■■□□□ 1.4
SEC22C-202ENST00000273156 LRP5O75197 1615 aa23.8■■□□□ 1.4
SEC22C-202ENST00000273156 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
SEC22C-202ENST00000273156 TXNRD1Q16881 649 aa23.8■■□□□ 1.4
SEC22C-202ENST00000273156 EMILIN1Q9Y6C2 1016 aa23.8■■□□□ 1.4
SEC22C-202ENST00000273156 TATP17735 454 aaPredicted RBP23.79■■□□□ 1.4
SEC22C-202ENST00000273156 PROM2Q8N271 834 aa23.78■■□□□ 1.4
SEC22C-202ENST00000273156 NUP188Q5SRE5 1749 aa23.77■■□□□ 1.4
SEC22C-202ENST00000273156 HNRNPUQ00839 825 aaKnown RBP eCLIP23.76■■□□□ 1.39
SEC22C-202ENST00000273156 USHBP1Q8N6Y0 703 aa23.75■■□□□ 1.39
SEC22C-202ENST00000273156 STK32BQ9NY57 414 aa23.75■■□□□ 1.39
SEC22C-202ENST00000273156 POLKQ9UBT6 870 aa23.75■■□□□ 1.39
SEC22C-202ENST00000273156 MEGF6O75095 1541 aa23.75■■□□□ 1.39
SEC22C-202ENST00000273156 NHSQ6T4R5 1651 aa23.75■■□□□ 1.39
SEC22C-202ENST00000273156 PCDH11XQ9BZA7 1347 aa23.72■■□□□ 1.39
SEC22C-202ENST00000273156 PCDH11YQ9BZA8 1340 aa23.72■■□□□ 1.39
SEC22C-202ENST00000273156 SYTL4Q96C24 671 aaPredicted RBP23.72■■□□□ 1.39
SEC22C-202ENST00000273156 SPON1Q9HCB6 807 aa23.72■■□□□ 1.39
SEC22C-202ENST00000273156 TNNT2P45379 298 aaPredicted RBP23.71■■□□□ 1.39
SEC22C-202ENST00000273156 ANO8Q9HCE9 1232 aaPredicted RBP23.71■■□□□ 1.39
SEC22C-202ENST00000273156 PRIM1P49642 420 aaKnown RBP23.7■■□□□ 1.39
SEC22C-202ENST00000273156 SLC27A3Q5K4L6 730 aa23.7■■□□□ 1.39
SEC22C-202ENST00000273156 SLC15A2Q16348 729 aa23.7■■□□□ 1.38
SEC22C-202ENST00000273156 HMGB2P26583 209 aaKnown RBP23.68■■□□□ 1.38
SEC22C-202ENST00000273156 SPG7Q9UQ90 795 aa23.68■■□□□ 1.38
SEC22C-202ENST00000273156 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.67■■□□□ 1.38
SEC22C-202ENST00000273156 NCAPD2Q15021 1401 aa23.67■■□□□ 1.38
SEC22C-202ENST00000273156 EYA1Q99502 592 aa23.66■■□□□ 1.38
SEC22C-202ENST00000273156 WDR43Q15061 677 aaKnown RBP eCLIP23.66■■□□□ 1.38
SEC22C-202ENST00000273156 ANKRD26Q9UPS8 1709 aa23.66■■□□□ 1.38
SEC22C-202ENST00000273156 PLEKHG2Q9H7P9 1386 aa23.65■■□□□ 1.38
SEC22C-202ENST00000273156 RGPD2P0DJD1 1756 aa23.64■■□□□ 1.38
SEC22C-202ENST00000273156 EIF4A2Q14240 407 aaKnown RBP23.64■■□□□ 1.38
SEC22C-202ENST00000273156 CFAP53Q96M91 514 aa23.63■■□□□ 1.37
SEC22C-202ENST00000273156 PPP1R1BQ9UD71 204 aaPredicted RBP23.63■■□□□ 1.37
SEC22C-202ENST00000273156 CYP27B1O15528 508 aa23.62■■□□□ 1.37
SEC22C-202ENST00000273156 MTHFSP49914 203 aa23.62■■□□□ 1.37
SEC22C-202ENST00000273156 BTAF1O14981 1849 aa23.61■■□□□ 1.37
SEC22C-202ENST00000273156 LRRC4BQ9NT99 713 aa23.61■■□□□ 1.37
SEC22C-202ENST00000273156 ZBED9Q6R2W3 1325 aa23.6■■□□□ 1.37
SEC22C-202ENST00000273156 KAT6BQ8WYB5 2073 aa23.59■■□□□ 1.37
SEC22C-202ENST00000273156 NKX1-1Q15270 411 aaPredicted RBP23.59■■□□□ 1.37
SEC22C-202ENST00000273156 MAP2P11137 1827 aaKnown RBP23.59■■□□□ 1.37
SEC22C-202ENST00000273156 IGSF1Q8N6C5 1336 aa23.58■■□□□ 1.37
SEC22C-202ENST00000273156 MTFR1LQ9H019 292 aa23.58■■□□□ 1.36
SEC22C-202ENST00000273156 ADAMTS8Q9UP79 889 aa23.58■■□□□ 1.36
SEC22C-202ENST00000273156 IFNL2Q8IZJ0 200 aa23.57■■□□□ 1.36
SEC22C-202ENST00000273156 CCNL1Q9UK58 526 aaPredicted RBP23.57■■□□□ 1.36
SEC22C-202ENST00000273156 SHANK3Q9BYB0 1731 aa23.57■■□□□ 1.36
SEC22C-202ENST00000273156 ZBTB7AO95365 584 aa23.56■■□□□ 1.36
SEC22C-202ENST00000273156 SMARCC1Q92922 1105 aaPredicted RBP23.56■■□□□ 1.36
SEC22C-202ENST00000273156 MPRIPQ6WCQ1 1025 aa23.55■■□□□ 1.36
SEC22C-202ENST00000273156 AKT1S1Q96B36 256 aa23.55■■□□□ 1.36
SEC22C-202ENST00000273156 PDGFDQ9GZP0 370 aaPredicted RBP23.55■■□□□ 1.36
SEC22C-202ENST00000273156 DOT1LQ8TEK3 1739 aa23.55■■□□□ 1.36
SEC22C-202ENST00000273156 ZNF827Q17R98 1081 aa23.54■■□□□ 1.36
SEC22C-202ENST00000273156 AMOTQ4VCS5 1084 aa23.53■■□□□ 1.36
SEC22C-202ENST00000273156 PLEKHO1Q53GL0 409 aaPredicted RBP23.53■■□□□ 1.36
SEC22C-202ENST00000273156 SLC16A10Q8TF71 515 aa23.53■■□□□ 1.36
SEC22C-202ENST00000273156 TFCP2L1Q9NZI6 479 aa23.53■■□□□ 1.36
SEC22C-202ENST00000273156 PAPPAQ13219 1627 aa23.53■■□□□ 1.36
SEC22C-202ENST00000273156 HSP90AB1P08238 724 aaKnown RBP23.52■■□□□ 1.36
SEC22C-202ENST00000273156 PHKG2P15735 406 aa23.52■■□□□ 1.36
SEC22C-202ENST00000273156 CASZ1Q86V15 1759 aa23.52■■□□□ 1.36
SEC22C-202ENST00000273156 PKD1L3Q7Z443 1732 aa23.52■■□□□ 1.36
SEC22C-202ENST00000273156 ATF5Q9Y2D1 282 aaPredicted RBP23.51■■□□□ 1.35
SEC22C-202ENST00000273156 PALLDQ8WX93 1383 aa23.5■■□□□ 1.35
SEC22C-202ENST00000273156 DCAF8L1A6NGE4 600 aa23.5■■□□□ 1.35
SEC22C-202ENST00000273156 PTGER2P43116 358 aa23.5■■□□□ 1.35
SEC22C-202ENST00000273156 TMOD3Q9NYL9 352 aa23.5■■□□□ 1.35
SEC22C-202ENST00000273156 NUDCQ9Y266 331 aa23.49■■□□□ 1.35
SEC22C-202ENST00000273156 PIGBQ92521 554 aa23.48■■□□□ 1.35
SEC22C-202ENST00000273156 IL13P35225 146 aa23.48■■□□□ 1.35
SEC22C-202ENST00000273156 KCNQ4P56696 695 aa23.48■■□□□ 1.35
SEC22C-202ENST00000273156 DCAF5Q96JK2 942 aa23.47■■□□□ 1.35
SEC22C-202ENST00000273156 ERVV-2B6SEH9 535 aa23.46■■□□□ 1.35
SEC22C-202ENST00000273156 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
SEC22C-202ENST00000273156 FLAD1Q8NFF5 587 aa23.45■■□□□ 1.34
SEC22C-202ENST00000273156 PNPLA7Q6ZV29 1317 aa23.45■■□□□ 1.34
SEC22C-202ENST00000273156 KDRP35968 1356 aa23.45■■□□□ 1.34
SEC22C-202ENST00000273156 LY75O60449 1722 aa23.45■■□□□ 1.34
SEC22C-202ENST00000273156 C1orf141Q5JVX7 400 aa23.44■■□□□ 1.34
SEC22C-202ENST00000273156 DIAPH1O60610 1272 aaKnown RBP23.44■■□□□ 1.34
SEC22C-202ENST00000273156 POLD1P28340 1107 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms