RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 PSME1Q06323 249 aa25.63■■□□□ 1.69
UBE2F-201ENST00000272930 CHMP4BQ9H444 224 aaKnown RBP25.63■■□□□ 1.69
UBE2F-201ENST00000272930 C14orf37Q86TY3 774 aa25.62■■□□□ 1.69
UBE2F-201ENST00000272930 ZBTB7BO15156 539 aaPredicted RBP25.61■■□□□ 1.69
UBE2F-201ENST00000272930 HTATSF1O43719 755 aaKnown RBP25.61■■□□□ 1.69
UBE2F-201ENST00000272930 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
UBE2F-201ENST00000272930 API5Q9BZZ5 524 aaKnown RBP25.61■■□□□ 1.69
UBE2F-201ENST00000272930 SMC5Q8IY18 1101 aa25.61■■□□□ 1.69
UBE2F-201ENST00000272930 KIF1AQ12756 1690 aa25.6■■□□□ 1.69
UBE2F-201ENST00000272930 TRPM3Q9HCF6 1732 aaPredicted RBP25.6■■□□□ 1.69
UBE2F-201ENST00000272930 IP6K1Q92551 441 aa25.59■■□□□ 1.69
UBE2F-201ENST00000272930 KRT24Q2M2I5 525 aa25.58■■□□□ 1.69
UBE2F-201ENST00000272930 KCNH5Q8NCM2 988 aa25.58■■□□□ 1.69
UBE2F-201ENST00000272930 SLIT3O75094 1523 aa25.58■■□□□ 1.69
UBE2F-201ENST00000272930 DDRGK1Q96HY6 314 aa25.58■■□□□ 1.68
UBE2F-201ENST00000272930 ORAI2Q96SN7 254 aa25.57■■□□□ 1.68
UBE2F-201ENST00000272930 PROSER2Q86WR7 435 aaPredicted RBP25.56■■□□□ 1.68
UBE2F-201ENST00000272930 RGS12O14924 1447 aa25.54■■□□□ 1.68
UBE2F-201ENST00000272930 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
UBE2F-201ENST00000272930 GNAT3A8MTJ3 354 aa25.54■■□□□ 1.68
UBE2F-201ENST00000272930 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
UBE2F-201ENST00000272930 TSPYL4Q9UJ04 414 aa25.53■■□□□ 1.68
UBE2F-201ENST00000272930 MSH6P52701 1360 aa25.53■■□□□ 1.68
UBE2F-201ENST00000272930 C1orf167Q5SNV9 1468 aa25.53■■□□□ 1.68
UBE2F-201ENST00000272930 MAP3K5Q99683 1374 aa25.53■■□□□ 1.68
UBE2F-201ENST00000272930 STRCP1A6NGW2 1772 aa25.52■■□□□ 1.68
UBE2F-201ENST00000272930 C19orf44Q9H6X5 657 aa25.51■■□□□ 1.67
UBE2F-201ENST00000272930 PTPRCP08575 1304 aa25.51■■□□□ 1.67
UBE2F-201ENST00000272930 INTS3Q68E01 1043 aaKnown RBP25.51■■□□□ 1.67
UBE2F-201ENST00000272930 MIS18AQ9NYP9 233 aa25.51■■□□□ 1.67
UBE2F-201ENST00000272930 CACNA1FO60840 1977 aa25.5■■□□□ 1.67
UBE2F-201ENST00000272930 MST1RQ04912 1400 aa25.5■■□□□ 1.67
UBE2F-201ENST00000272930 USP19O94966 1318 aa25.49■■□□□ 1.67
UBE2F-201ENST00000272930 ALS2Q96Q42 1657 aa25.48■■□□□ 1.67
UBE2F-201ENST00000272930 NUCB1Q02818 461 aa25.48■■□□□ 1.67
UBE2F-201ENST00000272930 GCP02774 474 aa25.47■■□□□ 1.67
UBE2F-201ENST00000272930 BABAM1Q9NWV8 329 aa25.47■■□□□ 1.67
UBE2F-201ENST00000272930 FAM208AQ9UK61 1670 aaKnown RBP25.47■■□□□ 1.67
UBE2F-201ENST00000272930 NBPF6Q5VWK0 638 aa25.47■■□□□ 1.67
UBE2F-201ENST00000272930 IL17REQ8NFR9 667 aa25.47■■□□□ 1.67
UBE2F-201ENST00000272930 NBPF4Q96M43 638 aa25.47■■□□□ 1.67
UBE2F-201ENST00000272930 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
UBE2F-201ENST00000272930 ARHGEF25Q86VW2 580 aa25.46■■□□□ 1.67
UBE2F-201ENST00000272930 USHBP1Q8N6Y0 703 aa25.46■■□□□ 1.67
UBE2F-201ENST00000272930 DCCP43146 1447 aa25.46■■□□□ 1.67
UBE2F-201ENST00000272930 NCOA3Q9Y6Q9 1424 aa25.46■■□□□ 1.67
UBE2F-201ENST00000272930 SEC24BO95487 1268 aa25.46■■□□□ 1.67
UBE2F-201ENST00000272930 XPCQ01831 940 aaPredicted RBP25.46■■□□□ 1.67
UBE2F-201ENST00000272930 GCC1Q96CN9 775 aa25.46■■□□□ 1.67
UBE2F-201ENST00000272930 CAMTA1Q9Y6Y1 1673 aa25.45■■□□□ 1.67
UBE2F-201ENST00000272930 C1orf115Q9H7X2 142 aa25.45■■□□□ 1.66
UBE2F-201ENST00000272930 LMO7Q8WWI1 1683 aa25.45■■□□□ 1.66
UBE2F-201ENST00000272930 KRT28Q7Z3Y7 464 aa25.44■■□□□ 1.66
UBE2F-201ENST00000272930 SIRT2Q8IXJ6 389 aa25.44■■□□□ 1.66
UBE2F-201ENST00000272930 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
UBE2F-201ENST00000272930 SOS1Q07889 1333 aaPredicted RBP25.43■■□□□ 1.66
UBE2F-201ENST00000272930 SLC4A2P04920 1241 aa25.43■■□□□ 1.66
UBE2F-201ENST00000272930 CEMIPQ8WUJ3 1361 aa25.43■■□□□ 1.66
UBE2F-201ENST00000272930 CHD1LQ86WJ1 897 aa25.42■■□□□ 1.66
UBE2F-201ENST00000272930 TMEM94Q12767 1356 aa25.41■■□□□ 1.66
UBE2F-201ENST00000272930 TAF7Q15545 349 aaPredicted RBP25.41■■□□□ 1.66
UBE2F-201ENST00000272930 RGPD5Q99666 1765 aa25.4■■□□□ 1.66
UBE2F-201ENST00000272930 KDM3BQ7LBC6 1761 aa25.39■■□□□ 1.66
UBE2F-201ENST00000272930 ATP10DQ9P241 1426 aa25.38■■□□□ 1.65
UBE2F-201ENST00000272930 ZBTB7CA1YPR0 619 aa25.38■■□□□ 1.65
UBE2F-201ENST00000272930 LNPKQ9C0E8 428 aa25.38■■□□□ 1.65
UBE2F-201ENST00000272930 ATF3P18847 181 aa25.37■■□□□ 1.65
UBE2F-201ENST00000272930 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
UBE2F-201ENST00000272930 LMOD2Q6P5Q4 547 aa25.37■■□□□ 1.65
UBE2F-201ENST00000272930 LRRC59Q96AG4 307 aaKnown RBP25.37■■□□□ 1.65
UBE2F-201ENST00000272930 G2E3Q7L622 706 aa25.36■■□□□ 1.65
UBE2F-201ENST00000272930 CCDC30Q5VVM6 783 aa25.36■■□□□ 1.65
UBE2F-201ENST00000272930 STK31Q9BXU1 1019 aa25.36■■□□□ 1.65
UBE2F-201ENST00000272930 ANKRD45Q5TZF3 282 aa25.34■■□□□ 1.65
UBE2F-201ENST00000272930 ANKRD24Q8TF21 1146 aa25.34■■□□□ 1.65
UBE2F-201ENST00000272930 UPF2Q9HAU5 1272 aaKnown RBP25.34■■□□□ 1.65
UBE2F-201ENST00000272930 RPAP2Q8IXW5 612 aaPredicted RBP25.33■■□□□ 1.65
UBE2F-201ENST00000272930 ANKRD44Q8N8A2 993 aa25.33■■□□□ 1.65
UBE2F-201ENST00000272930 XIRP1Q702N8 1843 aaKnown RBP25.33■■□□□ 1.65
UBE2F-201ENST00000272930 AMOTQ4VCS5 1084 aa25.32■■□□□ 1.64
UBE2F-201ENST00000272930 PLEKHO1Q53GL0 409 aaPredicted RBP25.32■■□□□ 1.64
UBE2F-201ENST00000272930 AKAP4Q5JQC9 854 aa25.32■■□□□ 1.64
UBE2F-201ENST00000272930 TBC1D32Q96NH3 1257 aa25.32■■□□□ 1.64
UBE2F-201ENST00000272930 CCT4P50991 539 aaKnown RBP25.32■■□□□ 1.64
UBE2F-201ENST00000272930 DCTPP1Q9H773 170 aa25.32■■□□□ 1.64
UBE2F-201ENST00000272930 AXIN2Q9Y2T1 843 aa25.31■■□□□ 1.64
UBE2F-201ENST00000272930 CRYBG1Q9Y4K1 1723 aa25.31■■□□□ 1.64
UBE2F-201ENST00000272930 OVOS2A0A0G2JMS6 1433 aa25.31■■□□□ 1.64
UBE2F-201ENST00000272930 MEIS3Q99687 375 aa25.3■■□□□ 1.64
UBE2F-201ENST00000272930 CEP85Q6P2H3 762 aa25.3■■□□□ 1.64
UBE2F-201ENST00000272930 CADPS2Q86UW7 1296 aa25.3■■□□□ 1.64
UBE2F-201ENST00000272930 LGR6Q9HBX8 967 aa25.3■■□□□ 1.64
UBE2F-201ENST00000272930 DAXXQ9UER7 740 aaPredicted RBP25.3■■□□□ 1.64
UBE2F-201ENST00000272930 LMTK3Q96Q04 1460 aa25.3■■□□□ 1.64
UBE2F-201ENST00000272930 FLIIQ13045 1269 aa25.29■■□□□ 1.64
UBE2F-201ENST00000272930 ZNF530Q6P9A1 599 aaPredicted RBP25.29■■□□□ 1.64
UBE2F-201ENST00000272930 PXDNQ92626 1479 aa25.29■■□□□ 1.64
UBE2F-201ENST00000272930 COL18A1P39060 1754 aa25.29■■□□□ 1.64
UBE2F-201ENST00000272930 BMP2KLQ5H9B9 411 aa25.29■■□□□ 1.64
UBE2F-201ENST00000272930 F6X3S4 739 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms