RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 U2AF1Q01081 240 aaKnown RBP eCLIP30.56■■■□□ 2.48
C1orf35-201ENST00000272139 MRS2Q9HD23 443 aa30.56■■■□□ 2.48
C1orf35-201ENST00000272139 CCDC184Q52MB2 194 aa30.56■■■□□ 2.48
C1orf35-201ENST00000272139 HMOX1P09601 288 aa30.55■■■□□ 2.48
C1orf35-201ENST00000272139 DEFB132Q7Z7B7 95 aa30.55■■■□□ 2.48
C1orf35-201ENST00000272139 LRRC37A3O60309 1634 aa30.54■■■□□ 2.48
C1orf35-201ENST00000272139 TATP17735 454 aaPredicted RBP30.54■■■□□ 2.48
C1orf35-201ENST00000272139 AEBP1Q8IUX7 1158 aa30.54■■■□□ 2.48
C1orf35-201ENST00000272139 DDB1Q16531 1140 aa30.53■■■□□ 2.48
C1orf35-201ENST00000272139 MIER1Q8N108 512 aa30.53■■■□□ 2.48
C1orf35-201ENST00000272139 WDR43Q15061 677 aaKnown RBP eCLIP30.52■■■□□ 2.48
C1orf35-201ENST00000272139 KDRP35968 1356 aa30.52■■■□□ 2.48
C1orf35-201ENST00000272139 DISP2A7MBM2 1401 aa30.51■■■□□ 2.47
C1orf35-201ENST00000272139 TNS1Q9HBL0 1735 aaKnown RBP30.5■■■□□ 2.47
C1orf35-201ENST00000272139 EXOC5O00471 708 aa30.49■■■□□ 2.47
C1orf35-201ENST00000272139 OVOS2A0A0G2JMS6 1433 aa30.49■■■□□ 2.47
C1orf35-201ENST00000272139 MEGF6O75095 1541 aa30.48■■■□□ 2.47
C1orf35-201ENST00000272139 CCER2I3L3R5 266 aa30.47■■■□□ 2.47
C1orf35-201ENST00000272139 FCHSD2O94868 740 aa30.47■■■□□ 2.47
C1orf35-201ENST00000272139 TRIM37O94972 964 aa30.47■■■□□ 2.47
C1orf35-201ENST00000272139 ZCRB1Q8TBF4 217 aaKnown RBP30.45■■■□□ 2.46
C1orf35-201ENST00000272139 RSPH6AQ9H0K4 717 aa30.44■■■□□ 2.46
C1orf35-201ENST00000272139 PNNQ9H307 717 aaKnown RBP30.44■■■□□ 2.46
C1orf35-201ENST00000272139 PNISRQ8TF01 805 aaKnown RBP30.43■■■□□ 2.46
C1orf35-201ENST00000272139 ADAMTS8Q9UP79 889 aa30.43■■■□□ 2.46
C1orf35-201ENST00000272139 PRKAR2BP31323 418 aa30.42■■■□□ 2.46
C1orf35-201ENST00000272139 SPG7Q9UQ90 795 aa30.42■■■□□ 2.46
C1orf35-201ENST00000272139 EN1Q05925 392 aaPredicted RBP30.41■■■□□ 2.46
C1orf35-201ENST00000272139 PLEKHO1Q53GL0 409 aaPredicted RBP30.41■■■□□ 2.46
C1orf35-201ENST00000272139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.41■■■□□ 2.46
C1orf35-201ENST00000272139 PLEKHG2Q9H7P9 1386 aa30.41■■■□□ 2.46
C1orf35-201ENST00000272139 TNS2Q63HR2 1409 aa30.41■■■□□ 2.46
C1orf35-201ENST00000272139 AMOTQ4VCS5 1084 aa30.4■■■□□ 2.46
C1orf35-201ENST00000272139 APBA3O96018 575 aa30.39■■■□□ 2.46
C1orf35-201ENST00000272139 NEFMP07197 916 aa30.39■■■□□ 2.46
C1orf35-201ENST00000272139 PKD1L3Q7Z443 1732 aa30.39■■■□□ 2.46
C1orf35-201ENST00000272139 DDX54Q8TDD1 881 aaKnown RBP30.39■■■□□ 2.45
C1orf35-201ENST00000272139 BCL9O00512 1426 aa30.38■■■□□ 2.45
C1orf35-201ENST00000272139 MARCH10Q8NA82 808 aaPredicted RBP30.37■■■□□ 2.45
C1orf35-201ENST00000272139 KAT6BQ8WYB5 2073 aa30.36■■■□□ 2.45
C1orf35-201ENST00000272139 SHANK3Q9BYB0 1731 aa30.35■■■□□ 2.45
C1orf35-201ENST00000272139 FAM9BQ8IZU0 186 aa30.35■■■□□ 2.45
C1orf35-201ENST00000272139 PCDH11XQ9BZA7 1347 aa30.35■■■□□ 2.45
C1orf35-201ENST00000272139 PCDH11YQ9BZA8 1340 aa30.35■■■□□ 2.45
C1orf35-201ENST00000272139 PHACTR3Q96KR7 559 aa30.34■■■□□ 2.45
C1orf35-201ENST00000272139 CAMKK2Q96RR4 588 aa30.33■■■□□ 2.45
C1orf35-201ENST00000272139 PLEKHF1Q96S99 279 aa30.33■■■□□ 2.45
C1orf35-201ENST00000272139 MAPK8IP3Q9UPT6 1336 aa30.32■■■□□ 2.44
C1orf35-201ENST00000272139 EZH2Q15910 746 aaKnown RBP30.32■■■□□ 2.44
C1orf35-201ENST00000272139 ZNF530Q6P9A1 599 aaPredicted RBP30.32■■■□□ 2.44
C1orf35-201ENST00000272139 MTHFSDQ2M296 383 aaKnown RBP30.31■■■□□ 2.44
C1orf35-201ENST00000272139 IFNL2Q8IZJ0 200 aa30.31■■■□□ 2.44
C1orf35-201ENST00000272139 SBF2Q86WG5 1849 aa30.31■■■□□ 2.44
C1orf35-201ENST00000272139 CYP27B1O15528 508 aa30.3■■■□□ 2.44
C1orf35-201ENST00000272139 CCDC146Q8IYE0 955 aa30.3■■■□□ 2.44
C1orf35-201ENST00000272139 C1orf141Q5JVX7 400 aa30.3■■■□□ 2.44
C1orf35-201ENST00000272139 GAS2L2Q8NHY3 880 aa30.3■■■□□ 2.44
C1orf35-201ENST00000272139 RUNDC1Q96C34 613 aa30.3■■■□□ 2.44
C1orf35-201ENST00000272139 BCL11BQ9C0K0 894 aaPredicted RBP30.3■■■□□ 2.44
C1orf35-201ENST00000272139 PHKG2P15735 406 aa30.27■■■□□ 2.44
C1orf35-201ENST00000272139 RREB1Q92766 1687 aa30.26■■■□□ 2.43
C1orf35-201ENST00000272139 RGPD3A6NKT7 1758 aaPredicted RBP30.26■■■□□ 2.43
C1orf35-201ENST00000272139 RGPD4Q7Z3J3 1758 aa30.26■■■□□ 2.43
C1orf35-201ENST00000272139 AKAP4Q5JQC9 854 aa30.25■■■□□ 2.43
C1orf35-201ENST00000272139 SRCAPQ6ZRS2 3230 aa30.25■■■□□ 2.43
C1orf35-201ENST00000272139 HSP90AB1P08238 724 aaKnown RBP30.23■■■□□ 2.43
C1orf35-201ENST00000272139 PLSCR1O15162 318 aa30.22■■■□□ 2.43
C1orf35-201ENST00000272139 DLG5Q8TDM6 1919 aa30.22■■■□□ 2.43
C1orf35-201ENST00000272139 NKX1-1Q15270 411 aaPredicted RBP30.22■■■□□ 2.43
C1orf35-201ENST00000272139 GNAT3A8MTJ3 354 aa30.21■■■□□ 2.43
C1orf35-201ENST00000272139 NFE2L2Q16236 605 aa30.21■■■□□ 2.43
C1orf35-201ENST00000272139 VIRMAQ69YN4 1812 aaKnown RBP30.2■■■□□ 2.42
C1orf35-201ENST00000272139 NHSQ6T4R5 1651 aa30.19■■■□□ 2.42
C1orf35-201ENST00000272139 NUP188Q5SRE5 1749 aa30.19■■■□□ 2.42
C1orf35-201ENST00000272139 TMPOP42166 694 aaKnown RBP30.18■■■□□ 2.42
C1orf35-201ENST00000272139 MPRIPQ6WCQ1 1025 aa30.18■■■□□ 2.42
C1orf35-201ENST00000272139 DCAF5Q96JK2 942 aa30.18■■■□□ 2.42
C1orf35-201ENST00000272139 MAP3K5Q99683 1374 aa30.17■■■□□ 2.42
C1orf35-201ENST00000272139 PSDA5PKW4 1024 aaPredicted RBP30.17■■■□□ 2.42
C1orf35-201ENST00000272139 APAF1O14727 1248 aa30.17■■■□□ 2.42
C1orf35-201ENST00000272139 NBPF14Q5TI25 921 aa30.17■■■□□ 2.42
C1orf35-201ENST00000272139 RIPK4P57078 832 aa30.16■■■□□ 2.42
C1orf35-201ENST00000272139 NEUROD2Q15784 382 aa30.16■■■□□ 2.42
C1orf35-201ENST00000272139 RTF1Q92541 710 aaKnown RBP30.16■■■□□ 2.42
C1orf35-201ENST00000272139 ACSBG1Q96GR2 724 aa30.16■■■□□ 2.42
C1orf35-201ENST00000272139 SCN11AQ9UI33 1791 aa30.16■■■□□ 2.42
C1orf35-201ENST00000272139 R3HDM1Q15032 1099 aaKnown RBP30.15■■■□□ 2.42
C1orf35-201ENST00000272139 PTF1AQ7RTS3 328 aa30.15■■■□□ 2.42
C1orf35-201ENST00000272139 RRP7AQ9Y3A4 280 aaKnown RBP30.14■■■□□ 2.42
C1orf35-201ENST00000272139 DOT1LQ8TEK3 1739 aa30.14■■■□□ 2.42
C1orf35-201ENST00000272139 HTATSF1O43719 755 aaKnown RBP30.13■■■□□ 2.41
C1orf35-201ENST00000272139 SYTL4Q96C24 671 aaPredicted RBP30.13■■■□□ 2.41
C1orf35-201ENST00000272139 LGR6Q9HBX8 967 aa30.13■■■□□ 2.41
C1orf35-201ENST00000272139 ITGB4P16144 1822 aa30.12■■■□□ 2.41
C1orf35-201ENST00000272139 RNMTO43148 476 aaKnown RBP30.12■■■□□ 2.41
C1orf35-201ENST00000272139 KCNQ2O43526 872 aa30.12■■■□□ 2.41
C1orf35-201ENST00000272139 PRIM1P49642 420 aaKnown RBP30.12■■■□□ 2.41
C1orf35-201ENST00000272139 KDM6AO15550 1401 aaPredicted RBP30.11■■■□□ 2.41
C1orf35-201ENST00000272139 ERVV-2B6SEH9 535 aa30.11■■■□□ 2.41
C1orf35-201ENST00000272139 TOGARAM1Q9Y4F4 1720 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms