RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 MEX3CQ5U5Q3 659 aaKnown RBP13.66□□□□□ -0.22
CDH2-201ENST00000269141 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
CDH2-201ENST00000269141 NSD2O96028 1365 aa13.66□□□□□ -0.22
CDH2-201ENST00000269141 BTBD11A6QL63 1104 aa13.66□□□□□ -0.22
CDH2-201ENST00000269141 KIF1BO60333 1816 aa13.66□□□□□ -0.22
CDH2-201ENST00000269141 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
CDH2-201ENST00000269141 NINLQ9Y2I6 1382 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 UQCRHLA0A096LP55 91 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 UQCRHP07919 91 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 HSP90AB1P08238 724 aaKnown RBP13.65□□□□□ -0.22
CDH2-201ENST00000269141 NEXNQ0ZGT2 675 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
CDH2-201ENST00000269141 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 MBIPQ9NS73 344 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 PIK3C2GO75747 1445 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 ANKRD24Q8TF21 1146 aa13.65□□□□□ -0.22
CDH2-201ENST00000269141 MYOM2P54296 1465 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 CEP152O94986 1710 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 GCP02774 474 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 EYA1Q99502 592 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 PDZRN3Q9UPQ7 1066 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 RNF17Q9BXT8 1623 aaKnown RBP13.64□□□□□ -0.23
CDH2-201ENST00000269141 CALRP27797 417 aaKnown RBP13.64□□□□□ -0.23
CDH2-201ENST00000269141 CABP4P57796 275 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
CDH2-201ENST00000269141 MVPQ14764 893 aaKnown RBP13.63□□□□□ -0.23
CDH2-201ENST00000269141 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
CDH2-201ENST00000269141 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
CDH2-201ENST00000269141 TRIM27P14373 513 aa13.63□□□□□ -0.23
CDH2-201ENST00000269141 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
CDH2-201ENST00000269141 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
CDH2-201ENST00000269141 PLCD4Q9BRC7 762 aa13.63□□□□□ -0.23
CDH2-201ENST00000269141 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
CDH2-201ENST00000269141 MTHFSDQ2M296 383 aaKnown RBP13.62□□□□□ -0.23
CDH2-201ENST00000269141 DNAJC2Q99543 621 aaKnown RBP13.62□□□□□ -0.23
CDH2-201ENST00000269141 UBTFL1P0CB47 393 aaPredicted RBP13.62□□□□□ -0.23
CDH2-201ENST00000269141 PPRC1Q5VV67 1664 aaKnown RBP13.61□□□□□ -0.23
CDH2-201ENST00000269141 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
CDH2-201ENST00000269141 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
CDH2-201ENST00000269141 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
CDH2-201ENST00000269141 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
CDH2-201ENST00000269141 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
CDH2-201ENST00000269141 MSH6P52701 1360 aa13.61□□□□□ -0.23
CDH2-201ENST00000269141 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
CDH2-201ENST00000269141 MRE11P49959 708 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 IGSF3O75054 1194 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 HSCBQ8IWL3 235 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 IFT57Q9NWB7 429 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 DIP2CQ9Y2E4 1556 aa13.6□□□□□ -0.23
CDH2-201ENST00000269141 PIP4K2AP48426 406 aaPredicted RBP13.59□□□□□ -0.23
CDH2-201ENST00000269141 SLC39A6Q13433 755 aa13.59□□□□□ -0.23
CDH2-201ENST00000269141 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
CDH2-201ENST00000269141 MAP3K4Q9Y6R4 1608 aa13.59□□□□□ -0.23
CDH2-201ENST00000269141 SURF6O75683 361 aaKnown RBP13.59□□□□□ -0.23
CDH2-201ENST00000269141 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.23
CDH2-201ENST00000269141 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.24
CDH2-201ENST00000269141 RLBP1P12271 317 aa13.58□□□□□ -0.24
CDH2-201ENST00000269141 LMTK2Q8IWU2 1503 aa13.58□□□□□ -0.24
CDH2-201ENST00000269141 HOXC9P31274 260 aa13.58□□□□□ -0.24
CDH2-201ENST00000269141 IL13P35225 146 aa13.58□□□□□ -0.24
CDH2-201ENST00000269141 NPHP3Q7Z494 1330 aa13.57□□□□□ -0.24
CDH2-201ENST00000269141 CCDC85AQ96PX6 553 aaPredicted RBP13.57□□□□□ -0.24
CDH2-201ENST00000269141 A2ML1A8K2U0 1454 aa13.57□□□□□ -0.24
CDH2-201ENST00000269141 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
CDH2-201ENST00000269141 SIL1Q9H173 461 aa13.56□□□□□ -0.24
CDH2-201ENST00000269141 ZNF830Q96NB3 372 aaPredicted RBP13.56□□□□□ -0.24
CDH2-201ENST00000269141 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
CDH2-201ENST00000269141 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
CDH2-201ENST00000269141 PLEKHG3A1L390 1219 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 IGHDP01880 384 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 KDM5AP29375 1690 aaKnown RBP13.55□□□□□ -0.24
CDH2-201ENST00000269141 GOLGA6L1Q8N7Z2 621 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 CSPP1Q1MSJ5 1256 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 IL1RAPL2Q9NP60 686 aa13.55□□□□□ -0.24
CDH2-201ENST00000269141 FLT4P35916 1363 aa13.54□□□□□ -0.24
CDH2-201ENST00000269141 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
CDH2-201ENST00000269141 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
CDH2-201ENST00000269141 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
CDH2-201ENST00000269141 SRCIN1Q9C0H9 1055 aa13.54□□□□□ -0.24
CDH2-201ENST00000269141 KIF20AO95235 890 aa13.54□□□□□ -0.24
CDH2-201ENST00000269141 NPC1L1Q9UHC9 1359 aa13.54□□□□□ -0.24
CDH2-201ENST00000269141 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
CDH2-201ENST00000269141 AXDND1Q5T1B0 1012 aaPredicted RBP13.54□□□□□ -0.24
CDH2-201ENST00000269141 UBAP1LF5GYI3 381 aa13.53□□□□□ -0.24
CDH2-201ENST00000269141 BANK1Q8NDB2 785 aa13.53□□□□□ -0.24
CDH2-201ENST00000269141 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
CDH2-201ENST00000269141 PCDHB15Q9Y5E8 787 aa13.53□□□□□ -0.24
CDH2-201ENST00000269141 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
CDH2-201ENST00000269141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.53□□□□□ -0.24
CDH2-201ENST00000269141 GNAI2P04899 355 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms