RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SOS2Q07890 1332 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-201ENST00000266589 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
SCAF11-201ENST00000266589 MAP3K5Q99683 1374 aa14.87□□□□□ -0.03
SCAF11-201ENST00000266589 ALDH1L2Q3SY69 923 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 TSPYL6Q8N831 410 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 ZNF428Q96B54 188 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 ABCC6O95255 1503 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 ERBB3P21860 1342 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 GNAT3A8MTJ3 354 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 CHL1O00533 1208 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
SCAF11-201ENST00000266589 ZKSCAN2Q63HK3 967 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 TNNQ9UQP3 1299 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 COG6Q9Y2V7 657 aa14.86□□□□□ -0.03
SCAF11-201ENST00000266589 LMO7Q8WWI1 1683 aa14.85□□□□□ -0.03
SCAF11-201ENST00000266589 VAMP4O75379 141 aa14.85□□□□□ -0.03
SCAF11-201ENST00000266589 TWISTNBQ3B726 338 aaPredicted RBP14.85□□□□□ -0.03
SCAF11-201ENST00000266589 ABCA3Q99758 1704 aa14.85□□□□□ -0.03
SCAF11-201ENST00000266589 FAM208AQ9UK61 1670 aaKnown RBP14.85□□□□□ -0.03
SCAF11-201ENST00000266589 C8orf58Q8NAV2 365 aa14.85□□□□□ -0.03
SCAF11-201ENST00000266589 KIF16BQ96L93 1317 aa14.84□□□□□ -0.03
SCAF11-201ENST00000266589 ELL2O00472 640 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-201ENST00000266589 RLBP1P12271 317 aa14.84□□□□□ -0.03
SCAF11-201ENST00000266589 CLUAP1Q96AJ1 413 aa14.84□□□□□ -0.03
SCAF11-201ENST00000266589 CPDO75976 1380 aa14.84□□□□□ -0.03
SCAF11-201ENST00000266589 KIAA0232Q92628 1395 aa14.84□□□□□ -0.03
SCAF11-201ENST00000266589 CHRNA2Q15822 529 aa14.83□□□□□ -0.04
SCAF11-201ENST00000266589 FTSJ3Q8IY81 847 aaKnown RBP14.83□□□□□ -0.04
SCAF11-201ENST00000266589 NOB1Q9ULX3 412 aaKnown RBP14.83□□□□□ -0.04
SCAF11-201ENST00000266589 LTBP4Q8N2S1 1624 aa14.83□□□□□ -0.04
SCAF11-201ENST00000266589 TRIM27P14373 513 aa14.82□□□□□ -0.04
SCAF11-201ENST00000266589 DZIP1LQ8IYY4 767 aaKnown RBP14.82□□□□□ -0.04
SCAF11-201ENST00000266589 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
SCAF11-201ENST00000266589 MS4A1P11836 297 aa14.81□□□□□ -0.04
SCAF11-201ENST00000266589 ATF7IPQ6VMQ6 1270 aa14.81□□□□□ -0.04
SCAF11-201ENST00000266589 TSPYL4Q9UJ04 414 aa14.81□□□□□ -0.04
SCAF11-201ENST00000266589 BRPF1P55201 1214 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-201ENST00000266589 IL17REQ8NFR9 667 aa14.81□□□□□ -0.04
SCAF11-201ENST00000266589 MIS18AQ9NYP9 233 aa14.81□□□□□ -0.04
SCAF11-201ENST00000266589 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
SCAF11-201ENST00000266589 IPO8O15397 1037 aaKnown RBP14.8□□□□□ -0.04
SCAF11-201ENST00000266589 KRT24Q2M2I5 525 aa14.8□□□□□ -0.04
SCAF11-201ENST00000266589 PLEKHO1Q53GL0 409 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-201ENST00000266589 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
SCAF11-201ENST00000266589 MVPQ14764 893 aaKnown RBP14.8□□□□□ -0.04
SCAF11-201ENST00000266589 AMOTQ4VCS5 1084 aa14.8□□□□□ -0.04
SCAF11-201ENST00000266589 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-201ENST00000266589 MRPL50Q8N5N7 158 aaKnown RBP14.8□□□□□ -0.04
SCAF11-201ENST00000266589 NLRP2Q9NX02 1062 aa14.8□□□□□ -0.04
SCAF11-201ENST00000266589 CSB-PGBD3P0DP91 1061 aa14.79□□□□□ -0.04
SCAF11-201ENST00000266589 HAP1P54257 671 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-201ENST00000266589 TCERG1O14776 1098 aaKnown RBP14.78□□□□□ -0.04
SCAF11-201ENST00000266589 KDM2BQ8NHM5 1336 aa14.78□□□□□ -0.04
SCAF11-201ENST00000266589 CEMIPQ8WUJ3 1361 aa14.78□□□□□ -0.04
SCAF11-201ENST00000266589 AKAP4Q5JQC9 854 aa14.78□□□□□ -0.04
SCAF11-201ENST00000266589 PRDM11Q9NQV5 511 aa14.78□□□□□ -0.04
SCAF11-201ENST00000266589 AAMPQ13685 434 aa14.77□□□□□ -0.04
SCAF11-201ENST00000266589 C1orf141Q5JVX7 400 aa14.77□□□□□ -0.05
SCAF11-201ENST00000266589 CENPQQ7L2Z9 268 aaPredicted RBP14.77□□□□□ -0.05
SCAF11-201ENST00000266589 TAF7Q15545 349 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-201ENST00000266589 ITPRIPQ8IWB1 547 aa14.76□□□□□ -0.05
SCAF11-201ENST00000266589 RAPGEF4Q8WZA2 1011 aa14.76□□□□□ -0.05
SCAF11-201ENST00000266589 AHDC1Q5TGY3 1603 aaPredicted RBP14.76□□□□□ -0.05
SCAF11-201ENST00000266589 MEGF6O75095 1541 aa14.75□□□□□ -0.05
SCAF11-201ENST00000266589 TMEM57Q8N5G2 664 aa14.75□□□□□ -0.05
SCAF11-201ENST00000266589 ARHGAP45Q92619 1136 aa14.75□□□□□ -0.05
SCAF11-201ENST00000266589 LGR6Q9HBX8 967 aa14.75□□□□□ -0.05
SCAF11-201ENST00000266589 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
SCAF11-201ENST00000266589 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
SCAF11-201ENST00000266589 TATP17735 454 aaPredicted RBP14.74□□□□□ -0.05
SCAF11-201ENST00000266589 MPRIPQ6WCQ1 1025 aa14.74□□□□□ -0.05
SCAF11-201ENST00000266589 DDX19BQ9UMR2 479 aa14.74□□□□□ -0.05
SCAF11-201ENST00000266589 OVOS2A0A0G2JMS6 1433 aa14.74□□□□□ -0.05
SCAF11-201ENST00000266589 COL5A2P05997 1499 aaPredicted RBP14.74□□□□□ -0.05
SCAF11-201ENST00000266589 ADAMTS7Q9UKP4 1686 aa14.73□□□□□ -0.05
SCAF11-201ENST00000266589 PKD1L3Q7Z443 1732 aa14.73□□□□□ -0.05
SCAF11-201ENST00000266589 WDR17Q8IZU2 1322 aa14.72□□□□□ -0.05
SCAF11-201ENST00000266589 RNMTO43148 476 aaKnown RBP14.72□□□□□ -0.05
SCAF11-201ENST00000266589 TEFQ10587 303 aa14.72□□□□□ -0.05
SCAF11-201ENST00000266589 SIPA1L3O60292 1781 aaPredicted RBP14.72□□□□□ -0.05
SCAF11-201ENST00000266589 PLEKHG2Q9H7P9 1386 aa14.72□□□□□ -0.05
SCAF11-201ENST00000266589 PARP4Q9UKK3 1724 aaKnown RBP14.71□□□□□ -0.05
SCAF11-201ENST00000266589 ABCC4O15439 1325 aa14.71□□□□□ -0.05
SCAF11-201ENST00000266589 IGHDP01880 384 aa14.71□□□□□ -0.05
SCAF11-201ENST00000266589 API5Q9BZZ5 524 aaKnown RBP14.71□□□□□ -0.05
SCAF11-201ENST00000266589 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
SCAF11-201ENST00000266589 PCDHB15Q9Y5E8 787 aa14.71□□□□□ -0.05
SCAF11-201ENST00000266589 COL22A1Q8NFW1 1626 aaPredicted RBP14.71□□□□□ -0.05
SCAF11-201ENST00000266589 SCN11AQ9UI33 1791 aa14.71□□□□□ -0.06
SCAF11-201ENST00000266589 TOM1L2Q6ZVM7 507 aa14.7□□□□□ -0.06
SCAF11-201ENST00000266589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.063e-7■■■■□ 22.3
SCAF11-201ENST00000266589 PHLPP1O60346 1717 aa14.7□□□□□ -0.06
SCAF11-201ENST00000266589 SOS1Q07889 1333 aaPredicted RBP14.69□□□□□ -0.06
SCAF11-201ENST00000266589 BTBD11A6QL63 1104 aa14.69□□□□□ -0.06
SCAF11-201ENST00000266589 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
SCAF11-201ENST00000266589 SKAP1Q86WV1 359 aa14.69□□□□□ -0.06
SCAF11-201ENST00000266589 RGS12O14924 1447 aa14.68□□□□□ -0.06
SCAF11-201ENST00000266589 PTPRCP08575 1304 aa14.68□□□□□ -0.06
SCAF11-201ENST00000266589 PHKG2P15735 406 aa14.68□□□□□ -0.06
SCAF11-201ENST00000266589 STK31Q9BXU1 1019 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms