RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 TRAPPC3LQ5T215 181 aa11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 ATAD2Q6PL18 1390 aa11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 HSP90AB4PQ58FF6 505 aa11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 CAVIN1Q6NZI2 390 aaKnown RBP11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
RAB3GAP1-201ENST00000264158 IL2RBP14784 551 aa11.21□□□□□ -0.61
RAB3GAP1-201ENST00000264158 UBTFL1P0CB47 393 aaPredicted RBP11.21□□□□□ -0.61
RAB3GAP1-201ENST00000264158 CEP89Q96ST8 783 aa11.21□□□□□ -0.61
RAB3GAP1-201ENST00000264158 CCDC87Q9NVE4 849 aa11.21□□□□□ -0.61
RAB3GAP1-201ENST00000264158 RAI14Q9P0K7 980 aa11.21□□□□□ -0.61
RAB3GAP1-201ENST00000264158 CCDC158Q5M9N0 1113 aa11.21□□□□□ -0.62
RAB3GAP1-201ENST00000264158 RNF214Q8ND24 703 aa11.21□□□□□ -0.62
RAB3GAP1-201ENST00000264158 FEZ1Q99689 392 aa11.21□□□□□ -0.62
RAB3GAP1-201ENST00000264158 KIF3AQ9Y496 699 aa11.21□□□□□ -0.62
RAB3GAP1-201ENST00000264158 GNPATO15228 680 aa11.2□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CAVIN4Q5BKX8 364 aa11.2□□□□□ -0.62
RAB3GAP1-201ENST00000264158 GPTP24298 496 aa11.2□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CREBRFQ8IUR6 639 aa11.2□□□□□ -0.62
RAB3GAP1-201ENST00000264158 PPP1R42Q7Z4L9 355 aa11.2□□□□□ -0.62
RAB3GAP1-201ENST00000264158 GRPEL1Q9HAV7 217 aa11.2□□□□□ -0.62
RAB3GAP1-201ENST00000264158 WDR7Q9Y4E6 1490 aa11.19□□□□□ -0.62
RAB3GAP1-201ENST00000264158 GCC1Q96CN9 775 aa11.19□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
RAB3GAP1-201ENST00000264158 DHX29Q7Z478 1369 aaKnown RBP11.19□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TTC39AQ5SRH9 613 aa11.19□□□□□ -0.62
RAB3GAP1-201ENST00000264158 KRT27Q7Z3Y8 459 aa11.19□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ABCF2Q9UG63 623 aa11.19□□□□□ -0.62
RAB3GAP1-201ENST00000264158 RFX1P22670 979 aa11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 RARSP54136 660 aaKnown RBP11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CPLX1O14810 134 aa11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 PRPF40AO75400 957 aaKnown RBP11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TWISTNBQ3B726 338 aaPredicted RBP11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 RALYLQ86SE5 291 aaKnown RBP11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 RABEP1Q15276 862 aa11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CHD1LQ86WJ1 897 aa11.18□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TRIM29Q14134 588 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CHMP4CQ96CF2 233 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 WDR70Q9NW82 654 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ABCA5Q8WWZ7 1642 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 FAM196AQ6ZSG2 479 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 H3BQV1 296 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 NEK4P51957 841 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 K7ELQ4 463 aaPredicted RBP11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CA8P35219 290 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
RAB3GAP1-201ENST00000264158 VPS37CA5D8V6 355 aaPredicted RBP11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TRIM37O94972 964 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TPM4P67936 248 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 SCLT1Q96NL6 688 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ZNF335Q9H4Z2 1342 aaPredicted RBP11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 H0YIN7 160 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 IGHDP01880 384 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TCIRG1Q13488 830 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 RUFY2Q8WXA3 655 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 SMC3Q9UQE7 1217 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 NSD3Q9BZ95 1437 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 GNAT3A8MTJ3 354 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 MSL1Q68DK7 614 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 SLF2Q8IX21 1173 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CCDC141Q6ZP82 1450 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 TARBP1Q13395 1621 aaKnown RBP11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ZKSCAN1P17029 563 aaPredicted RBP11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CTTNBP2Q8WZ74 1663 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 UGGT2Q9NYU1 1516 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 GOLGA6L19H0YKK7 550 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ACEP12821 1306 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 SF3A1Q15459 793 aaKnown RBP11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 DZIP1Q86YF9 867 aaKnown RBP11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 FAM184AQ8NB25 1140 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 VEZTQ9HBM0 779 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 ESPNB1AK53 854 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 IFIT1P09914 478 aaKnown RBP11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 NME9Q86XW9 330 aa11.15□□□□□ -0.62
RAB3GAP1-201ENST00000264158 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
RAB3GAP1-201ENST00000264158 BECN2A8MW95 431 aa11.14□□□□□ -0.63
RAB3GAP1-201ENST00000264158 SART3Q15020 963 aaKnown RBP11.14□□□□□ -0.63
RAB3GAP1-201ENST00000264158 ARHGEF6Q15052 776 aa11.14□□□□□ -0.63
RAB3GAP1-201ENST00000264158 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
RAB3GAP1-201ENST00000264158 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
RAB3GAP1-201ENST00000264158 ZNF710Q8N1W2 664 aa11.14□□□□□ -0.63
RAB3GAP1-201ENST00000264158 ZBTB3Q9H5J0 574 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms