RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 ANKRD26Q9UPS8 1709 aa27.87■■■□□ 2.05
CKLF-201ENST00000264001 TXNRD1Q16881 649 aa27.86■■■□□ 2.05
CKLF-201ENST00000264001 SPON1Q9HCB6 807 aa27.86■■■□□ 2.05
CKLF-201ENST00000264001 ANO8Q9HCE9 1232 aaPredicted RBP27.86■■■□□ 2.05
CKLF-201ENST00000264001 ZCRB1Q8TBF4 217 aaKnown RBP27.85■■■□□ 2.05
CKLF-201ENST00000264001 PANK3Q9H999 370 aa27.85■■■□□ 2.05
CKLF-201ENST00000264001 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
CKLF-201ENST00000264001 RAPGEF4Q8WZA2 1011 aa27.82■■■□□ 2.04
CKLF-201ENST00000264001 PAPPAQ13219 1627 aa27.81■■■□□ 2.04
CKLF-201ENST00000264001 PPP1R1BQ9UD71 204 aaPredicted RBP27.81■■■□□ 2.04
CKLF-201ENST00000264001 DOT1LQ8TEK3 1739 aa27.8■■■□□ 2.04
CKLF-201ENST00000264001 TATP17735 454 aaPredicted RBP27.79■■■□□ 2.04
CKLF-201ENST00000264001 WASHC2AQ641Q2 1341 aa27.78■■■□□ 2.04
CKLF-201ENST00000264001 POLKQ9UBT6 870 aa27.78■■■□□ 2.04
CKLF-201ENST00000264001 TNNT2P45379 298 aaPredicted RBP27.77■■■□□ 2.04
CKLF-201ENST00000264001 STK32BQ9NY57 414 aa27.76■■■□□ 2.03
CKLF-201ENST00000264001 PRIM1P49642 420 aaKnown RBP27.75■■■□□ 2.03
CKLF-201ENST00000264001 SYTL4Q96C24 671 aaPredicted RBP27.75■■■□□ 2.03
CKLF-201ENST00000264001 NSD2O96028 1365 aa27.73■■■□□ 2.03
CKLF-201ENST00000264001 SLC15A2Q16348 729 aa27.73■■■□□ 2.03
CKLF-201ENST00000264001 NCAPD2Q15021 1401 aa27.73■■■□□ 2.03
CKLF-201ENST00000264001 QSER1Q2KHR3 1735 aa27.72■■■□□ 2.03
CKLF-201ENST00000264001 KIF7Q2M1P5 1343 aa27.71■■■□□ 2.03
CKLF-201ENST00000264001 PDGFDQ9GZP0 370 aaPredicted RBP27.71■■■□□ 2.03
CKLF-201ENST00000264001 PCDH11XQ9BZA7 1347 aa27.7■■■□□ 2.03
CKLF-201ENST00000264001 PCDH11YQ9BZA8 1340 aa27.7■■■□□ 2.03
CKLF-201ENST00000264001 EYA1Q99502 592 aa27.7■■■□□ 2.02
CKLF-201ENST00000264001 PKD1L3Q7Z443 1732 aa27.7■■■□□ 2.02
CKLF-201ENST00000264001 LRRC4BQ9NT99 713 aa27.69■■■□□ 2.02
CKLF-201ENST00000264001 KNSTRNQ9Y448 316 aa27.68■■■□□ 2.02
CKLF-201ENST00000264001 LY75O60449 1722 aa27.67■■■□□ 2.02
CKLF-201ENST00000264001 ZBTB7AO95365 584 aa27.67■■■□□ 2.02
CKLF-201ENST00000264001 EIF4A2Q14240 407 aaKnown RBP27.67■■■□□ 2.02
CKLF-201ENST00000264001 TUBGCP6Q96RT7 1819 aa27.67■■■□□ 2.02
CKLF-201ENST00000264001 CYP27B1O15528 508 aa27.66■■■□□ 2.02
CKLF-201ENST00000264001 MORC1Q86VD1 984 aa27.66■■■□□ 2.02
CKLF-201ENST00000264001 SLC27A3Q5K4L6 730 aa27.65■■■□□ 2.02
CKLF-201ENST00000264001 DCAF8L1A6NGE4 600 aa27.63■■■□□ 2.01
CKLF-201ENST00000264001 ZNF827Q17R98 1081 aa27.63■■■□□ 2.01
CKLF-201ENST00000264001 TOGARAM1Q9Y4F4 1720 aa27.61■■■□□ 2.01
CKLF-201ENST00000264001 PTGER2P43116 358 aa27.61■■■□□ 2.01
CKLF-201ENST00000264001 KCNQ4P56696 695 aa27.61■■■□□ 2.01
CKLF-201ENST00000264001 MTFR1LQ9H019 292 aa27.61■■■□□ 2.01
CKLF-201ENST00000264001 SPG7Q9UQ90 795 aa27.61■■■□□ 2.01
CKLF-201ENST00000264001 ITGB4P16144 1822 aa27.61■■■□□ 2.01
CKLF-201ENST00000264001 AMER1Q5JTC6 1135 aaPredicted RBP27.6■■■□□ 2.01
CKLF-201ENST00000264001 ATF5Q9Y2D1 282 aaPredicted RBP27.59■■■□□ 2.01
CKLF-201ENST00000264001 AKT1S1Q96B36 256 aa27.58■■■□□ 2.01
CKLF-201ENST00000264001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.58■■■□□ 2.01
CKLF-201ENST00000264001 IGSF1Q8N6C5 1336 aa27.58■■■□□ 2.01
CKLF-201ENST00000264001 MPRIPQ6WCQ1 1025 aa27.57■■■□□ 2
CKLF-201ENST00000264001 COL24A1Q17RW2 1714 aa27.57■■■□□ 2
CKLF-201ENST00000264001 YY1P25490 414 aa27.56■■■□□ 2
CKLF-201ENST00000264001 NKX1-1Q15270 411 aaPredicted RBP27.56■■■□□ 2
CKLF-201ENST00000264001 CCNL1Q9UK58 526 aaPredicted RBP27.56■■■□□ 2
CKLF-201ENST00000264001 PER1O15534 1290 aaPredicted RBP27.53■■■□□ 2
CKLF-201ENST00000264001 CHD4Q14839 1912 aa27.53■■■□□ 2
CKLF-201ENST00000264001 PLEKHG2Q9H7P9 1386 aa27.52■■■□□ 2
CKLF-201ENST00000264001 IFNL2Q8IZJ0 200 aa27.52■■■□□ 2
CKLF-201ENST00000264001 SGIP1Q9BQI5 828 aa27.52■■■□□ 2
CKLF-201ENST00000264001 C5P01031 1676 aa27.52■■■□□ 2
CKLF-201ENST00000264001 PALLDQ8WX93 1383 aa27.51■■□□□ 1.99
CKLF-201ENST00000264001 PHKG2P15735 406 aa27.51■■□□□ 1.99
CKLF-201ENST00000264001 TFCP2L1Q9NZI6 479 aa27.51■■□□□ 1.99
CKLF-201ENST00000264001 PNPLA7Q6ZV29 1317 aa27.49■■□□□ 1.99
CKLF-201ENST00000264001 PIGBQ92521 554 aa27.49■■□□□ 1.99
CKLF-201ENST00000264001 FHDC1Q9C0D6 1143 aaPredicted RBP27.49■■□□□ 1.99
CKLF-201ENST00000264001 TAF1LQ8IZX4 1826 aa27.48■■□□□ 1.99
CKLF-201ENST00000264001 SMARCC1Q92922 1105 aaPredicted RBP27.48■■□□□ 1.99
CKLF-201ENST00000264001 CC2D1BQ5T0F9 858 aaKnown RBP27.47■■□□□ 1.99
CKLF-201ENST00000264001 MAP3K5Q99683 1374 aa27.47■■□□□ 1.99
CKLF-201ENST00000264001 AEBP1Q8IUX7 1158 aa27.46■■□□□ 1.99
CKLF-201ENST00000264001 SLC16A10Q8TF71 515 aa27.46■■□□□ 1.99
CKLF-201ENST00000264001 IL13P35225 146 aa27.45■■□□□ 1.98
CKLF-201ENST00000264001 PLEKHO1Q53GL0 409 aaPredicted RBP27.45■■□□□ 1.98
CKLF-201ENST00000264001 ARXQ96QS3 562 aa27.45■■□□□ 1.98
CKLF-201ENST00000264001 SYT17Q9BSW7 474 aa27.45■■□□□ 1.98
CKLF-201ENST00000264001 TMOD3Q9NYL9 352 aa27.45■■□□□ 1.98
CKLF-201ENST00000264001 MTHFSP49914 203 aa27.44■■□□□ 1.98
CKLF-201ENST00000264001 SULT6B1Q6IMI4 303 aa27.43■■□□□ 1.98
CKLF-201ENST00000264001 AMOTQ4VCS5 1084 aa27.42■■□□□ 1.98
CKLF-201ENST00000264001 KDRP35968 1356 aa27.41■■□□□ 1.98
CKLF-201ENST00000264001 HMGB2P26583 209 aaKnown RBP27.41■■□□□ 1.98
CKLF-201ENST00000264001 ZNF530Q6P9A1 599 aaPredicted RBP27.41■■□□□ 1.98
CKLF-201ENST00000264001 NPC1L1Q9UHC9 1359 aa27.4■■□□□ 1.98
CKLF-201ENST00000264001 C4BP0C0L5 1744 aa27.39■■□□□ 1.98
CKLF-201ENST00000264001 HSP90AB1P08238 724 aaKnown RBP27.39■■□□□ 1.98
CKLF-201ENST00000264001 ASAP1Q9ULH1 1129 aa27.39■■□□□ 1.98
CKLF-201ENST00000264001 POLD1P28340 1107 aa27.38■■□□□ 1.97
CKLF-201ENST00000264001 CNGB1Q14028 1251 aaPredicted RBP27.38■■□□□ 1.97
CKLF-201ENST00000264001 COL23A1Q86Y22 540 aaPredicted RBP27.38■■□□□ 1.97
CKLF-201ENST00000264001 DCAF5Q96JK2 942 aa27.38■■□□□ 1.97
CKLF-201ENST00000264001 LOC102724428A0A0B4J2F2 783 aa27.37■■□□□ 1.97
CKLF-201ENST00000264001 ERVV-2B6SEH9 535 aa27.37■■□□□ 1.97
CKLF-201ENST00000264001 SIK1P57059 783 aa27.37■■□□□ 1.97
CKLF-201ENST00000264001 KDM6AO15550 1401 aaPredicted RBP27.36■■□□□ 1.97
CKLF-201ENST00000264001 MSH5O43196 834 aa27.36■■□□□ 1.97
CKLF-201ENST00000264001 ATG3Q9NT62 314 aa27.35■■□□□ 1.97
CKLF-201ENST00000264001 C1orf141Q5JVX7 400 aa27.34■■□□□ 1.97
CKLF-201ENST00000264001 UBR3Q6ZT12 1888 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms