RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TNNQ9UQP3 1299 aa28.79■■■□□ 2.2
SIX3-201ENST00000260653 CRB1P82279 1406 aa28.79■■■□□ 2.2
SIX3-201ENST00000260653 NCAPD2Q15021 1401 aa28.76■■■□□ 2.19
SIX3-201ENST00000260653 ERBB3P21860 1342 aa28.76■■■□□ 2.19
SIX3-201ENST00000260653 CHL1O00533 1208 aa28.76■■■□□ 2.19
SIX3-201ENST00000260653 COL18A1P39060 1754 aa28.75■■■□□ 2.19
SIX3-201ENST00000260653 ELL2O00472 640 aaPredicted RBP28.75■■■□□ 2.19
SIX3-201ENST00000260653 VAMP4O75379 141 aa28.75■■■□□ 2.19
SIX3-201ENST00000260653 RLBP1P12271 317 aa28.75■■■□□ 2.19
SIX3-201ENST00000260653 CAMTA1Q9Y6Y1 1673 aa28.75■■■□□ 2.19
SIX3-201ENST00000260653 GNAT3A8MTJ3 354 aa28.75■■■□□ 2.19
SIX3-201ENST00000260653 C8orf58Q8NAV2 365 aa28.75■■■□□ 2.19
SIX3-201ENST00000260653 COG6Q9Y2V7 657 aa28.75■■■□□ 2.19
SIX3-201ENST00000260653 MAP3K5Q99683 1374 aa28.74■■■□□ 2.19
SIX3-201ENST00000260653 ZKSCAN2Q63HK3 967 aa28.73■■■□□ 2.19
SIX3-201ENST00000260653 CLUAP1Q96AJ1 413 aa28.73■■■□□ 2.19
SIX3-201ENST00000260653 LRRC37A3O60309 1634 aa28.73■■■□□ 2.19
SIX3-201ENST00000260653 NHSL1Q5SYE7 1610 aa28.73■■■□□ 2.19
SIX3-201ENST00000260653 HTATSF1O43719 755 aaKnown RBP28.73■■■□□ 2.19
SIX3-201ENST00000260653 TWISTNBQ3B726 338 aaPredicted RBP28.73■■■□□ 2.19
SIX3-201ENST00000260653 ALDH1L2Q3SY69 923 aa28.73■■■□□ 2.19
SIX3-201ENST00000260653 CHRNA2Q15822 529 aa28.72■■■□□ 2.19
SIX3-201ENST00000260653 ZNF428Q96B54 188 aa28.72■■■□□ 2.19
SIX3-201ENST00000260653 KIAA0232Q92628 1395 aa28.72■■■□□ 2.19
SIX3-201ENST00000260653 MIS18AQ9NYP9 233 aa28.7■■■□□ 2.18
SIX3-201ENST00000260653 NOB1Q9ULX3 412 aaKnown RBP28.7■■■□□ 2.18
SIX3-201ENST00000260653 CPDO75976 1380 aa28.69■■■□□ 2.18
SIX3-201ENST00000260653 LMO7Q8WWI1 1683 aa28.69■■■□□ 2.18
SIX3-201ENST00000260653 KRT24Q2M2I5 525 aa28.69■■■□□ 2.18
SIX3-201ENST00000260653 LTBP4Q8N2S1 1624 aa28.68■■■□□ 2.18
SIX3-201ENST00000260653 TRIM27P14373 513 aa28.68■■■□□ 2.18
SIX3-201ENST00000260653 IL17REQ8NFR9 667 aa28.68■■■□□ 2.18
SIX3-201ENST00000260653 KIF16BQ96L93 1317 aa28.68■■■□□ 2.18
SIX3-201ENST00000260653 TSHZ2Q9NRE2 1034 aa28.68■■■□□ 2.18
SIX3-201ENST00000260653 ABCC6O95255 1503 aa28.67■■■□□ 2.18
SIX3-201ENST00000260653 FTSJ3Q8IY81 847 aaKnown RBP28.66■■■□□ 2.18
SIX3-201ENST00000260653 ATF7IPQ6VMQ6 1270 aa28.66■■■□□ 2.18
SIX3-201ENST00000260653 DZIP1LQ8IYY4 767 aaKnown RBP28.66■■■□□ 2.18
SIX3-201ENST00000260653 TSPYL4Q9UJ04 414 aa28.66■■■□□ 2.18
SIX3-201ENST00000260653 TCERG1O14776 1098 aaKnown RBP28.65■■■□□ 2.18
SIX3-201ENST00000260653 NLRP2Q9NX02 1062 aa28.65■■■□□ 2.18
SIX3-201ENST00000260653 ABCA3Q99758 1704 aa28.64■■■□□ 2.18
SIX3-201ENST00000260653 BRPF1P55201 1214 aaPredicted RBP28.64■■■□□ 2.17
SIX3-201ENST00000260653 PLEKHO1Q53GL0 409 aaPredicted RBP28.64■■■□□ 2.17
SIX3-201ENST00000260653 MRPL50Q8N5N7 158 aaKnown RBP28.64■■■□□ 2.17
SIX3-201ENST00000260653 ZNF530Q6P9A1 599 aaPredicted RBP28.63■■■□□ 2.17
SIX3-201ENST00000260653 FAM208AQ9UK61 1670 aaKnown RBP28.62■■■□□ 2.17
SIX3-201ENST00000260653 CSB-PGBD3P0DP91 1061 aa28.62■■■□□ 2.17
SIX3-201ENST00000260653 AMOTQ4VCS5 1084 aa28.62■■■□□ 2.17
SIX3-201ENST00000260653 ROBO1Q9Y6N7 1651 aa28.61■■■□□ 2.17
SIX3-201ENST00000260653 IPO8O15397 1037 aaKnown RBP28.61■■■□□ 2.17
SIX3-201ENST00000260653 MS4A1P11836 297 aa28.61■■■□□ 2.17
SIX3-201ENST00000260653 HAP1P54257 671 aaPredicted RBP28.61■■■□□ 2.17
SIX3-201ENST00000260653 MVPQ14764 893 aaKnown RBP28.61■■■□□ 2.17
SIX3-201ENST00000260653 PRDM11Q9NQV5 511 aa28.61■■■□□ 2.17
SIX3-201ENST00000260653 CEMIPQ8WUJ3 1361 aa28.6■■■□□ 2.17
SIX3-201ENST00000260653 KDM2BQ8NHM5 1336 aa28.6■■■□□ 2.17
SIX3-201ENST00000260653 AKAP4Q5JQC9 854 aa28.59■■■□□ 2.17
SIX3-201ENST00000260653 LGR6Q9HBX8 967 aa28.59■■■□□ 2.17
SIX3-201ENST00000260653 TAF7Q15545 349 aaPredicted RBP28.57■■■□□ 2.16
SIX3-201ENST00000260653 C1orf141Q5JVX7 400 aa28.56■■■□□ 2.16
SIX3-201ENST00000260653 RAPGEF4Q8WZA2 1011 aa28.56■■■□□ 2.16
SIX3-201ENST00000260653 MEGF6O75095 1541 aa28.55■■■□□ 2.16
SIX3-201ENST00000260653 MPRIPQ6WCQ1 1025 aa28.54■■■□□ 2.16
SIX3-201ENST00000260653 ITPRIPQ8IWB1 547 aa28.54■■■□□ 2.16
SIX3-201ENST00000260653 TMEM57Q8N5G2 664 aa28.54■■■□□ 2.16
SIX3-201ENST00000260653 CENPQQ7L2Z9 268 aaPredicted RBP28.54■■■□□ 2.16
SIX3-201ENST00000260653 VIRMAQ69YN4 1812 aaKnown RBP28.54■■■□□ 2.16
SIX3-201ENST00000260653 ARHGAP45Q92619 1136 aa28.52■■■□□ 2.16
SIX3-201ENST00000260653 AAMPQ13685 434 aa28.52■■■□□ 2.16
SIX3-201ENST00000260653 BABAM1Q9NWV8 329 aa28.51■■■□□ 2.16
SIX3-201ENST00000260653 TATP17735 454 aaPredicted RBP28.5■■■□□ 2.15
SIX3-201ENST00000260653 AHDC1Q5TGY3 1603 aaPredicted RBP28.5■■■□□ 2.15
SIX3-201ENST00000260653 DDX19BQ9UMR2 479 aa28.5■■■□□ 2.15
SIX3-201ENST00000260653 COL5A2P05997 1499 aaPredicted RBP28.5■■■□□ 2.15
SIX3-201ENST00000260653 RNMTO43148 476 aaKnown RBP28.49■■■□□ 2.15
SIX3-201ENST00000260653 PCDHB15Q9Y5E8 787 aa28.49■■■□□ 2.15
SIX3-201ENST00000260653 IGHDP01880 384 aa28.48■■■□□ 2.15
SIX3-201ENST00000260653 WDR17Q8IZU2 1322 aa28.48■■■□□ 2.15
SIX3-201ENST00000260653 SKAP1Q86WV1 359 aa28.48■■■□□ 2.15
SIX3-201ENST00000260653 TEFQ10587 303 aa28.47■■■□□ 2.15
SIX3-201ENST00000260653 OVOS2A0A0G2JMS6 1433 aa28.46■■■□□ 2.15
SIX3-201ENST00000260653 KDM3BQ7LBC6 1761 aa28.46■■■□□ 2.15
SIX3-201ENST00000260653 ABCC4O15439 1325 aa28.45■■■□□ 2.15
SIX3-201ENST00000260653 TOM1L2Q6ZVM7 507 aa28.44■■■□□ 2.14
SIX3-201ENST00000260653 SPG7Q9UQ90 795 aa28.44■■■□□ 2.14
SIX3-201ENST00000260653 ADAMTS7Q9UKP4 1686 aa28.44■■■□□ 2.14
SIX3-201ENST00000260653 API5Q9BZZ5 524 aaKnown RBP28.43■■■□□ 2.14
SIX3-201ENST00000260653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.43■■■□□ 2.14
SIX3-201ENST00000260653 SLC4A2P04920 1241 aa28.43■■■□□ 2.14
SIX3-201ENST00000260653 PKD1L3Q7Z443 1732 aa28.42■■■□□ 2.14
SIX3-201ENST00000260653 BTBD11A6QL63 1104 aa28.41■■■□□ 2.14
SIX3-201ENST00000260653 STRN4Q9NRL3 753 aa28.41■■■□□ 2.14
SIX3-201ENST00000260653 PLEKHG2Q9H7P9 1386 aa28.41■■■□□ 2.14
SIX3-201ENST00000260653 RGS12O14924 1447 aa28.41■■■□□ 2.14
SIX3-201ENST00000260653 PHKG2P15735 406 aa28.41■■■□□ 2.14
SIX3-201ENST00000260653 KCNQ3O43525 872 aa28.4■■■□□ 2.14
SIX3-201ENST00000260653 ZBTB40Q9NUA8 1239 aa28.4■■■□□ 2.14
SIX3-201ENST00000260653 KDM6AO15550 1401 aaPredicted RBP28.4■■■□□ 2.14
SIX3-201ENST00000260653 SIPA1L3O60292 1781 aaPredicted RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms