RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 VWDEQ8N2E2 1590 aa24.93■■□□□ 1.58
RARA-201ENST00000254066 NOLC1Q14978 699 aaKnown RBP eCLIP24.93■■□□□ 1.58
RARA-201ENST00000254066 PPP4R3BQ5MIZ7 849 aa24.93■■□□□ 1.58
RARA-201ENST00000254066 SLC12A5Q9H2X9 1139 aa24.93■■□□□ 1.58
RARA-201ENST00000254066 SPTLC3Q9NUV7 552 aa24.93■■□□□ 1.58
RARA-201ENST00000254066 QRICH2Q9H0J4 1663 aa24.91■■□□□ 1.58
RARA-201ENST00000254066 KIF1BO60333 1816 aa24.9■■□□□ 1.58
RARA-201ENST00000254066 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
RARA-201ENST00000254066 GSPT1P15170 499 aaKnown RBP24.9■■□□□ 1.58
RARA-201ENST00000254066 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
RARA-201ENST00000254066 FKBP5Q13451 457 aaPredicted RBP24.9■■□□□ 1.58
RARA-201ENST00000254066 ZNF142P52746 1687 aaPredicted RBP24.89■■□□□ 1.58
RARA-201ENST00000254066 ANKRD36BQ8N2N9 1353 aa24.89■■□□□ 1.57
RARA-201ENST00000254066 TTC22Q5TAA0 569 aa24.88■■□□□ 1.57
RARA-201ENST00000254066 CASC1Q6TDU7 716 aa24.88■■□□□ 1.57
RARA-201ENST00000254066 PLEKHM2Q8IWE5 1019 aa24.88■■□□□ 1.57
RARA-201ENST00000254066 CBX1P83916 185 aa24.87■■□□□ 1.57
RARA-201ENST00000254066 KIF24Q5T7B8 1368 aa24.87■■□□□ 1.57
RARA-201ENST00000254066 COL3A1P02461 1466 aaPredicted RBP24.87■■□□□ 1.57
RARA-201ENST00000254066 ZGPATQ8N5A5 531 aaKnown RBP24.87■■□□□ 1.57
RARA-201ENST00000254066 FBXO41Q8TF61 875 aa24.87■■□□□ 1.57
RARA-201ENST00000254066 MCM2P49736 904 aa24.86■■□□□ 1.57
RARA-201ENST00000254066 SIRT2Q8IXJ6 389 aa24.86■■□□□ 1.57
RARA-201ENST00000254066 NSFL1CQ9UNZ2 370 aaKnown RBP24.86■■□□□ 1.57
RARA-201ENST00000254066 RNF214Q8ND24 703 aa24.85■■□□□ 1.57
RARA-201ENST00000254066 DIAPH3Q9NSV4 1193 aa24.85■■□□□ 1.57
RARA-201ENST00000254066 BRD1O95696 1058 aa24.84■■□□□ 1.57
RARA-201ENST00000254066 CEP170BQ9Y4F5 1589 aaPredicted RBP24.84■■□□□ 1.57
RARA-201ENST00000254066 REC8O95072 547 aa24.84■■□□□ 1.57
RARA-201ENST00000254066 ATP2B3Q16720 1220 aa24.84■■□□□ 1.57
RARA-201ENST00000254066 FEZ1Q99689 392 aa24.84■■□□□ 1.57
RARA-201ENST00000254066 ABCC4O15439 1325 aa24.84■■□□□ 1.57
RARA-201ENST00000254066 PDCL2Q8N4E4 241 aa24.83■■□□□ 1.56
RARA-201ENST00000254066 CAMSAP1Q5T5Y3 1602 aa24.82■■□□□ 1.56
RARA-201ENST00000254066 BCL2L12Q9HB09 334 aa24.82■■□□□ 1.56
RARA-201ENST00000254066 ANKRD7Q92527 254 aa24.82■■□□□ 1.56
RARA-201ENST00000254066 TPM3P06753 285 aa24.81■■□□□ 1.56
RARA-201ENST00000254066 TEX2Q8IWB9 1127 aa24.81■■□□□ 1.56
RARA-201ENST00000254066 MRPL50Q8N5N7 158 aaKnown RBP24.81■■□□□ 1.56
RARA-201ENST00000254066 DCTPP1Q9H773 170 aa24.81■■□□□ 1.56
RARA-201ENST00000254066 A2ML1A8K2U0 1454 aa24.81■■□□□ 1.56
RARA-201ENST00000254066 TNRQ92752 1358 aa24.8■■□□□ 1.56
RARA-201ENST00000254066 INTS4Q96HW7 963 aaKnown RBP24.8■■□□□ 1.56
RARA-201ENST00000254066 U2SURPO15042 1029 aaKnown RBP24.78■■□□□ 1.56
RARA-201ENST00000254066 CHAF1AQ13111 956 aaPredicted RBP24.78■■□□□ 1.56
RARA-201ENST00000254066 CUL4AQ13619 759 aa24.78■■□□□ 1.56
RARA-201ENST00000254066 ABCC3O15438 1527 aa24.78■■□□□ 1.56
RARA-201ENST00000254066 CHRM1P11229 460 aaPredicted RBP24.77■■□□□ 1.56
RARA-201ENST00000254066 ADGRB1O14514 1584 aa24.77■■□□□ 1.56
RARA-201ENST00000254066 CTIFO43310 598 aaKnown RBP24.76■■□□□ 1.55
RARA-201ENST00000254066 SYCP1Q15431 976 aa24.76■■□□□ 1.55
RARA-201ENST00000254066 CERKQ8TCT0 537 aa24.76■■□□□ 1.55
RARA-201ENST00000254066 ZFP91Q96JP5 570 aaPredicted RBP24.76■■□□□ 1.55
RARA-201ENST00000254066 C1orf115Q9H7X2 142 aa24.76■■□□□ 1.55
RARA-201ENST00000254066 MROH1Q8NDA8 1641 aa24.75■■□□□ 1.55
RARA-201ENST00000254066 VAMP4O75379 141 aa24.75■■□□□ 1.55
RARA-201ENST00000254066 SAMD1Q6SPF0 538 aaPredicted RBP24.75■■□□□ 1.55
RARA-201ENST00000254066 API5Q9BZZ5 524 aaKnown RBP24.75■■□□□ 1.55
RARA-201ENST00000254066 CDC42BPGQ6DT37 1551 aa24.75■■□□□ 1.55
RARA-201ENST00000254066 TSC1Q92574 1164 aa24.74■■□□□ 1.55
RARA-201ENST00000254066 C14orf93Q9H972 538 aaKnown RBP24.74■■□□□ 1.55
RARA-201ENST00000254066 EVC2Q86UK5 1308 aa24.74■■□□□ 1.55
RARA-201ENST00000254066 OGFRQ9NZT2 677 aa24.74■■□□□ 1.55
RARA-201ENST00000254066 ERC2O15083 957 aa24.73■■□□□ 1.55
RARA-201ENST00000254066 ADCY5O95622 1261 aa24.73■■□□□ 1.55
RARA-201ENST00000254066 JARID2Q92833 1246 aaPredicted RBP24.73■■□□□ 1.55
RARA-201ENST00000254066 TMX3Q96JJ7 454 aa24.73■■□□□ 1.55
RARA-201ENST00000254066 ANKRD26Q9UPS8 1709 aa24.73■■□□□ 1.55
RARA-201ENST00000254066 GABPB1Q06547 395 aaPredicted RBP24.73■■□□□ 1.55
RARA-201ENST00000254066 TMEM87AQ8NBN3 555 aa24.73■■□□□ 1.55
RARA-201ENST00000254066 BCCIPQ9P287 314 aaKnown RBP eCLIP24.73■■□□□ 1.55
RARA-201ENST00000254066 ADGRB3O60242 1522 aa24.73■■□□□ 1.55
RARA-201ENST00000254066 FBXO31Q5XUX0 539 aaPredicted RBP24.72■■□□□ 1.55
RARA-201ENST00000254066 TRAK1Q9UPV9 953 aa24.72■■□□□ 1.55
RARA-201ENST00000254066 SDSP20132 328 aa24.72■■□□□ 1.55
RARA-201ENST00000254066 KIAA1524Q8TCG1 905 aa24.72■■□□□ 1.55
RARA-201ENST00000254066 CCDC183Q5T5S1 534 aa24.71■■□□□ 1.55
RARA-201ENST00000254066 USP25Q9UHP3 1055 aa24.71■■□□□ 1.55
RARA-201ENST00000254066 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
RARA-201ENST00000254066 FCHSD2O94868 740 aa24.71■■□□□ 1.55
RARA-201ENST00000254066 TTC12Q9H892 705 aaPredicted RBP24.71■■□□□ 1.55
RARA-201ENST00000254066 SPATA31D1Q6ZQQ2 1576 aa24.7■■□□□ 1.54
RARA-201ENST00000254066 UGGT1Q9NYU2 1555 aa24.7■■□□□ 1.54
RARA-201ENST00000254066 KDM4AO75164 1064 aa24.69■■□□□ 1.54
RARA-201ENST00000254066 ZNF830Q96NB3 372 aaPredicted RBP24.69■■□□□ 1.54
RARA-201ENST00000254066 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
RARA-201ENST00000254066 KNDC1Q76NI1 1749 aa24.68■■□□□ 1.54
RARA-201ENST00000254066 RPAP2Q8IXW5 612 aaPredicted RBP24.68■■□□□ 1.54
RARA-201ENST00000254066 TULP4Q9NRJ4 1543 aa24.68■■□□□ 1.54
RARA-201ENST00000254066 DIAPH1O60610 1272 aaKnown RBP24.67■■□□□ 1.54
RARA-201ENST00000254066 TULP1O00294 542 aaPredicted RBP24.67■■□□□ 1.54
RARA-201ENST00000254066 RIOK3O14730 519 aaKnown RBP24.67■■□□□ 1.54
RARA-201ENST00000254066 ANAPC15P60006 121 aa24.67■■□□□ 1.54
RARA-201ENST00000254066 ANKRD44Q8N8A2 993 aa24.67■■□□□ 1.54
RARA-201ENST00000254066 IL17RAQ96F46 866 aa24.67■■□□□ 1.54
RARA-201ENST00000254066 PPLO60437 1756 aa24.67■■□□□ 1.54
RARA-201ENST00000254066 WDR33Q9C0J8 1336 aaKnown RBP24.66■■□□□ 1.54
RARA-201ENST00000254066 NCKAP5LQ9HCH0 1330 aa24.66■■□□□ 1.54
RARA-201ENST00000254066 MX1P20591 662 aa24.66■■□□□ 1.54
RARA-201ENST00000254066 CHAMP1Q96JM3 812 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms