RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 PANK3Q9H999 370 aa17.41■□□□□ 0.38
SEM1-201ENST00000248566 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
SEM1-201ENST00000248566 RTL1A6NKG5 1358 aa17.39■□□□□ 0.37
SEM1-201ENST00000248566 FXR2P51116 673 aaKnown RBP eCLIP17.39■□□□□ 0.37
SEM1-201ENST00000248566 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
SEM1-201ENST00000248566 TNS2Q63HR2 1409 aa17.38■□□□□ 0.37
SEM1-201ENST00000248566 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
SEM1-201ENST00000248566 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
SEM1-201ENST00000248566 FAM208AQ9UK61 1670 aaKnown RBP17.38■□□□□ 0.37
SEM1-201ENST00000248566 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
SEM1-201ENST00000248566 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
SEM1-201ENST00000248566 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
SEM1-201ENST00000248566 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
SEM1-201ENST00000248566 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
SEM1-201ENST00000248566 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
SEM1-201ENST00000248566 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
SEM1-201ENST00000248566 SBF2Q86WG5 1849 aa17.36■□□□□ 0.37
SEM1-201ENST00000248566 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
SEM1-201ENST00000248566 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
SEM1-201ENST00000248566 FLT4P35916 1363 aa17.35■□□□□ 0.37
SEM1-201ENST00000248566 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
SEM1-201ENST00000248566 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
SEM1-201ENST00000248566 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
SEM1-201ENST00000248566 KCNQ2O43526 872 aa17.33■□□□□ 0.36
SEM1-201ENST00000248566 NBPF14Q5TI25 921 aa17.33■□□□□ 0.36
SEM1-201ENST00000248566 INSRP06213 1382 aa17.33■□□□□ 0.36
SEM1-201ENST00000248566 KIF7Q2M1P5 1343 aa17.32■□□□□ 0.36
SEM1-201ENST00000248566 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
SEM1-201ENST00000248566 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
SEM1-201ENST00000248566 ZCRB1Q8TBF4 217 aaKnown RBP17.31■□□□□ 0.36
SEM1-201ENST00000248566 MAP2P11137 1827 aaKnown RBP17.31■□□□□ 0.36
SEM1-201ENST00000248566 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
SEM1-201ENST00000248566 PLSCR1O15162 318 aa17.3■□□□□ 0.36
SEM1-201ENST00000248566 TATP17735 454 aaPredicted RBP17.3■□□□□ 0.36
SEM1-201ENST00000248566 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
SEM1-201ENST00000248566 SYTL4Q96C24 671 aaPredicted RBP17.3■□□□□ 0.36
SEM1-201ENST00000248566 KIF24Q5T7B8 1368 aa17.3■□□□□ 0.36
SEM1-201ENST00000248566 RREB1Q92766 1687 aa17.3■□□□□ 0.36
SEM1-201ENST00000248566 BCL9O00512 1426 aa17.3■□□□□ 0.36
SEM1-201ENST00000248566 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
SEM1-201ENST00000248566 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
SEM1-201ENST00000248566 MEGF6O75095 1541 aa17.29■□□□□ 0.36
SEM1-201ENST00000248566 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
SEM1-201ENST00000248566 KAT6BQ8WYB5 2073 aa17.28■□□□□ 0.36
SEM1-201ENST00000248566 NHSQ6T4R5 1651 aa17.27■□□□□ 0.36
SEM1-201ENST00000248566 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
SEM1-201ENST00000248566 NSD2O96028 1365 aa17.27■□□□□ 0.35
SEM1-201ENST00000248566 HAX1O00165 279 aa17.26■□□□□ 0.35
SEM1-201ENST00000248566 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
SEM1-201ENST00000248566 RGPD3A6NKT7 1758 aaPredicted RBP17.24■□□□□ 0.35
SEM1-201ENST00000248566 RGPD4Q7Z3J3 1758 aa17.24■□□□□ 0.35
SEM1-201ENST00000248566 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
SEM1-201ENST00000248566 PROM2Q8N271 834 aa17.23■□□□□ 0.35
SEM1-201ENST00000248566 EYA1Q99502 592 aa17.23■□□□□ 0.35
SEM1-201ENST00000248566 SPDYE2BA6NHP3 402 aa17.22■□□□□ 0.35
SEM1-201ENST00000248566 SPDYE6P0CI01 402 aa17.22■□□□□ 0.35
SEM1-201ENST00000248566 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
SEM1-201ENST00000248566 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
SEM1-201ENST00000248566 BTAF1O14981 1849 aa17.22■□□□□ 0.35
SEM1-201ENST00000248566 DOT1LQ8TEK3 1739 aa17.22■□□□□ 0.35
SEM1-201ENST00000248566 SHANK3Q9BYB0 1731 aa17.22■□□□□ 0.35
SEM1-201ENST00000248566 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
SEM1-201ENST00000248566 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.35
SEM1-201ENST00000248566 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.35
SEM1-201ENST00000248566 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.34
SEM1-201ENST00000248566 STK32BQ9NY57 414 aa17.21■□□□□ 0.34
SEM1-201ENST00000248566 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
SEM1-201ENST00000248566 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
SEM1-201ENST00000248566 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
SEM1-201ENST00000248566 LRP5O75197 1615 aa17.18■□□□□ 0.34
SEM1-201ENST00000248566 CYP27B1O15528 508 aa17.17■□□□□ 0.34
SEM1-201ENST00000248566 KCNQ4P56696 695 aa17.16■□□□□ 0.34
SEM1-201ENST00000248566 SLC15A2Q16348 729 aa17.16■□□□□ 0.34
SEM1-201ENST00000248566 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
SEM1-201ENST00000248566 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
SEM1-201ENST00000248566 MTHFSP49914 203 aa17.14■□□□□ 0.33
SEM1-201ENST00000248566 PDGFDQ9GZP0 370 aaPredicted RBP17.14■□□□□ 0.33
SEM1-201ENST00000248566 SPON1Q9HCB6 807 aa17.14■□□□□ 0.33
SEM1-201ENST00000248566 LRRC4BQ9NT99 713 aa17.14■□□□□ 0.33
SEM1-201ENST00000248566 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
SEM1-201ENST00000248566 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
SEM1-201ENST00000248566 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
SEM1-201ENST00000248566 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
SEM1-201ENST00000248566 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
SEM1-201ENST00000248566 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
SEM1-201ENST00000248566 IFNL2Q8IZJ0 200 aa17.12■□□□□ 0.33
SEM1-201ENST00000248566 CCNL1Q9UK58 526 aaPredicted RBP17.12■□□□□ 0.33
SEM1-201ENST00000248566 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
SEM1-201ENST00000248566 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
SEM1-201ENST00000248566 PHKG2P15735 406 aa17.1■□□□□ 0.33
SEM1-201ENST00000248566 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
SEM1-201ENST00000248566 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
SEM1-201ENST00000248566 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
SEM1-201ENST00000248566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.335e-8■□□□□ 10.5
SEM1-201ENST00000248566 IL13P35225 146 aa17.09■□□□□ 0.33
SEM1-201ENST00000248566 EVX2Q03828 476 aa17.09■□□□□ 0.33
SEM1-201ENST00000248566 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
SEM1-201ENST00000248566 TOGARAM1Q9Y4F4 1720 aa17.08■□□□□ 0.33
SEM1-201ENST00000248566 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
SEM1-201ENST00000248566 TFCP2L1Q9NZI6 479 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms