RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SMC5Q8IY18 1101 aa19.09■□□□□ 0.65
DDX49-201ENST00000247003 NWD1Q149M9 1564 aa19.08■□□□□ 0.65
DDX49-201ENST00000247003 MTHFSDQ2M296 383 aaKnown RBP19.08■□□□□ 0.64
DDX49-201ENST00000247003 CRB1P82279 1406 aa19.08■□□□□ 0.64
DDX49-201ENST00000247003 PSME1Q06323 249 aa19.07■□□□□ 0.64
DDX49-201ENST00000247003 ESCO1Q5FWF5 840 aa19.07■□□□□ 0.64
DDX49-201ENST00000247003 ZBTB7BO15156 539 aaPredicted RBP19.07■□□□□ 0.64
DDX49-201ENST00000247003 HTATSF1O43719 755 aaKnown RBP19.07■□□□□ 0.64
DDX49-201ENST00000247003 LRRC37A3O60309 1634 aa19.06■□□□□ 0.64
DDX49-201ENST00000247003 TSPYL4Q9UJ04 414 aa19.06■□□□□ 0.64
DDX49-201ENST00000247003 NBR1Q14596 966 aa19.05■□□□□ 0.64
DDX49-201ENST00000247003 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
DDX49-201ENST00000247003 PTPRCP08575 1304 aa19.05■□□□□ 0.64
DDX49-201ENST00000247003 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
DDX49-201ENST00000247003 GCC1Q96CN9 775 aa19.04■□□□□ 0.64
DDX49-201ENST00000247003 RBM33Q96EV2 1170 aaKnown RBP19.04■□□□□ 0.64
DDX49-201ENST00000247003 FOXO3O43524 673 aa19.03■□□□□ 0.64
DDX49-201ENST00000247003 NFAT5O94916 1531 aa19.03■□□□□ 0.64
DDX49-201ENST00000247003 GNAT3A8MTJ3 354 aa19.02■□□□□ 0.64
DDX49-201ENST00000247003 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.64
DDX49-201ENST00000247003 MAP3K5Q99683 1374 aa19.02■□□□□ 0.64
DDX49-201ENST00000247003 NUCB1Q02818 461 aa19.02■□□□□ 0.63
DDX49-201ENST00000247003 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
DDX49-201ENST00000247003 PHRF1Q9P1Y6 1649 aaKnown RBP19.01■□□□□ 0.63
DDX49-201ENST00000247003 KRT24Q2M2I5 525 aa19■□□□□ 0.63
DDX49-201ENST00000247003 IP6K1Q92551 441 aa19■□□□□ 0.63
DDX49-201ENST00000247003 INTS3Q68E01 1043 aaKnown RBP19■□□□□ 0.63
DDX49-201ENST00000247003 CHD1LQ86WJ1 897 aa19■□□□□ 0.63
DDX49-201ENST00000247003 C1orf115Q9H7X2 142 aa19■□□□□ 0.63
DDX49-201ENST00000247003 BECN1Q14457 450 aa18.98■□□□□ 0.63
DDX49-201ENST00000247003 LMTK3Q96Q04 1460 aa18.98■□□□□ 0.63
DDX49-201ENST00000247003 SEC24BO95487 1268 aa18.97■□□□□ 0.63
DDX49-201ENST00000247003 STK31Q9BXU1 1019 aa18.97■□□□□ 0.63
DDX49-201ENST00000247003 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
DDX49-201ENST00000247003 USP19O94966 1318 aa18.97■□□□□ 0.63
DDX49-201ENST00000247003 ZBTB7CA1YPR0 619 aa18.97■□□□□ 0.63
DDX49-201ENST00000247003 MIS18AQ9NYP9 233 aa18.97■□□□□ 0.63
DDX49-201ENST00000247003 RGS12O14924 1447 aa18.97■□□□□ 0.63
DDX49-201ENST00000247003 SOS1Q07889 1333 aaPredicted RBP18.96■□□□□ 0.63
DDX49-201ENST00000247003 SLC4A2P04920 1241 aa18.96■□□□□ 0.63
DDX49-201ENST00000247003 PROSER2Q86WR7 435 aaPredicted RBP18.96■□□□□ 0.63
DDX49-201ENST00000247003 BABAM1Q9NWV8 329 aa18.96■□□□□ 0.63
DDX49-201ENST00000247003 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
DDX49-201ENST00000247003 SLIT3O75094 1523 aa18.95■□□□□ 0.62
DDX49-201ENST00000247003 ANKRD45Q5TZF3 282 aa18.95■□□□□ 0.62
DDX49-201ENST00000247003 MSH6P52701 1360 aa18.95■□□□□ 0.62
DDX49-201ENST00000247003 TBC1D32Q96NH3 1257 aa18.94■□□□□ 0.62
DDX49-201ENST00000247003 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
DDX49-201ENST00000247003 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
DDX49-201ENST00000247003 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
DDX49-201ENST00000247003 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
DDX49-201ENST00000247003 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
DDX49-201ENST00000247003 TRPM3Q9HCF6 1732 aaPredicted RBP18.93■□□□□ 0.62
DDX49-201ENST00000247003 TAF7Q15545 349 aaPredicted RBP18.92■□□□□ 0.62
DDX49-201ENST00000247003 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
DDX49-201ENST00000247003 CCT4P50991 539 aaKnown RBP18.91■□□□□ 0.62
DDX49-201ENST00000247003 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
DDX49-201ENST00000247003 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
DDX49-201ENST00000247003 C1orf167Q5SNV9 1468 aa18.91■□□□□ 0.62
DDX49-201ENST00000247003 HSPA2P54652 639 aa18.9■□□□□ 0.62
DDX49-201ENST00000247003 SIRT2Q8IXJ6 389 aa18.9■□□□□ 0.62
DDX49-201ENST00000247003 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
DDX49-201ENST00000247003 GCP02774 474 aa18.9■□□□□ 0.62
DDX49-201ENST00000247003 MFAP1P55081 439 aaKnown RBP18.9■□□□□ 0.62
DDX49-201ENST00000247003 BMP2KLQ5H9B9 411 aa18.9■□□□□ 0.62
DDX49-201ENST00000247003 CACNA1FO60840 1977 aa18.89■□□□□ 0.62
DDX49-201ENST00000247003 XPCQ01831 940 aaPredicted RBP18.89■□□□□ 0.61
DDX49-201ENST00000247003 ANKRD44Q8N8A2 993 aa18.89■□□□□ 0.61
DDX49-201ENST00000247003 IL17REQ8NFR9 667 aa18.89■□□□□ 0.61
DDX49-201ENST00000247003 ATP10DQ9P241 1426 aa18.89■□□□□ 0.61
DDX49-201ENST00000247003 LMO7Q8WWI1 1683 aa18.89■□□□□ 0.61
DDX49-201ENST00000247003 RGPD2P0DJD1 1756 aa18.88■□□□□ 0.61
DDX49-201ENST00000247003 NBPF6Q5VWK0 638 aa18.88■□□□□ 0.61
DDX49-201ENST00000247003 SLC4A10Q6U841 1118 aa18.88■□□□□ 0.61
DDX49-201ENST00000247003 KRT28Q7Z3Y7 464 aa18.88■□□□□ 0.61
DDX49-201ENST00000247003 NBPF4Q96M43 638 aa18.88■□□□□ 0.61
DDX49-201ENST00000247003 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
DDX49-201ENST00000247003 HMMRO75330 724 aa18.87■□□□□ 0.61
DDX49-201ENST00000247003 ATF3P18847 181 aa18.87■□□□□ 0.61
DDX49-201ENST00000247003 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
DDX49-201ENST00000247003 ARHGEF25Q86VW2 580 aa18.87■□□□□ 0.61
DDX49-201ENST00000247003 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
DDX49-201ENST00000247003 MED1Q15648 1581 aaPredicted RBP18.87■□□□□ 0.61
DDX49-201ENST00000247003 DCCP43146 1447 aa18.87■□□□□ 0.61
DDX49-201ENST00000247003 CEMIPQ8WUJ3 1361 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 DCTPP1Q9H773 170 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 FLIIQ13045 1269 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 FKBP5Q13451 457 aaPredicted RBP18.86■□□□□ 0.61
DDX49-201ENST00000247003 AKAP4Q5JQC9 854 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 MEIS3Q99687 375 aa18.86■□□□□ 0.61
DDX49-201ENST00000247003 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
DDX49-201ENST00000247003 EIF5BO60841 1220 aaKnown RBP18.85■□□□□ 0.61
DDX49-201ENST00000247003 G2E3Q7L622 706 aa18.85■□□□□ 0.61
DDX49-201ENST00000247003 N4BP2Q86UW6 1770 aaPredicted RBP18.85■□□□□ 0.61
DDX49-201ENST00000247003 PXDNLA1KZ92 1463 aa18.85■□□□□ 0.61
DDX49-201ENST00000247003 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
DDX49-201ENST00000247003 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms