RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.68□□□□□ -0.54
IRF1-201ENST00000245414 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
IRF1-201ENST00000245414 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
IRF1-201ENST00000245414 POLKQ9UBT6 870 aa11.67□□□□□ -0.54
IRF1-201ENST00000245414 ZDHHC9Q9Y397 364 aa11.67□□□□□ -0.54
IRF1-201ENST00000245414 GADD45BO75293 160 aaPredicted RBP11.67□□□□□ -0.54
IRF1-201ENST00000245414 CDC45O75419 566 aa11.67□□□□□ -0.54
IRF1-201ENST00000245414 PLB1Q6P1J6 1458 aa11.67□□□□□ -0.54
IRF1-201ENST00000245414 LRMPQ12912 555 aa11.67□□□□□ -0.54
IRF1-201ENST00000245414 HDAC1Q13547 482 aaPredicted RBP11.67□□□□□ -0.54
IRF1-201ENST00000245414 LCMT1Q9UIC8 334 aa11.67□□□□□ -0.54
IRF1-201ENST00000245414 MBD5Q9P267 1494 aa11.66□□□□□ -0.54
IRF1-201ENST00000245414 CCDC183Q5T5S1 534 aa11.66□□□□□ -0.54
IRF1-201ENST00000245414 CARD10Q9BWT7 1032 aa11.66□□□□□ -0.54
IRF1-201ENST00000245414 ROCK1Q13464 1354 aa11.66□□□□□ -0.54
IRF1-201ENST00000245414 GOLIM4O00461 696 aa11.66□□□□□ -0.54
IRF1-201ENST00000245414 KIF14Q15058 1648 aa11.65□□□□□ -0.54
IRF1-201ENST00000245414 SMARCA5O60264 1052 aaPredicted RBP11.65□□□□□ -0.54
IRF1-201ENST00000245414 NUCB1Q02818 461 aa11.65□□□□□ -0.54
IRF1-201ENST00000245414 CCDC91Q7Z6B0 441 aa11.65□□□□□ -0.54
IRF1-201ENST00000245414 FAM212AQ96EL1 285 aa11.65□□□□□ -0.54
IRF1-201ENST00000245414 RRP15Q9Y3B9 282 aaKnown RBP11.64□□□□□ -0.55
IRF1-201ENST00000245414 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 USP48Q86UV5 1035 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 CHD1O14646 1710 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 CAMSAP2Q08AD1 1489 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 ANKRD36BQ8N2N9 1353 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 PTPN14Q15678 1187 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 HOMEZQ8IX15 550 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 AK7Q96M32 723 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 ZNF446Q9NWS9 450 aa11.64□□□□□ -0.55
IRF1-201ENST00000245414 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.64□□□□□ -0.55
IRF1-201ENST00000245414 LMAN1P49257 510 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.63□□□□□ -0.55
IRF1-201ENST00000245414 TESK2Q96S53 571 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 TRIM5Q9C035 493 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 CARMIL2Q6F5E8 1435 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 CXorf56Q9H5V9 222 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 DNAJC21Q5F1R6 531 aaKnown RBP11.63□□□□□ -0.55
IRF1-201ENST00000245414 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 ERO1AQ96HE7 468 aa11.63□□□□□ -0.55
IRF1-201ENST00000245414 HNRNPMP52272 730 aaKnown RBP eCLIP11.62□□□□□ -0.55
IRF1-201ENST00000245414 SATB1Q01826 763 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 NUTM2DQ5VT03 806 aaPredicted RBP11.62□□□□□ -0.55
IRF1-201ENST00000245414 ARGLU1Q9NWB6 273 aaPredicted RBP11.62□□□□□ -0.55
IRF1-201ENST00000245414 ANKRD50Q9ULJ7 1429 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
IRF1-201ENST00000245414 MUM1L1Q5H9M0 696 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 CASC1Q6TDU7 716 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 TMCO3Q6UWJ1 677 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 TRMT1Q9NXH9 659 aaKnown RBP11.62□□□□□ -0.55
IRF1-201ENST00000245414 SLU7O95391 586 aaKnown RBP11.62□□□□□ -0.55
IRF1-201ENST00000245414 NEK4P51957 841 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 ST5P78524 1137 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 SMARCE1Q969G3 411 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 SUFUQ9UMX1 484 aa11.62□□□□□ -0.55
IRF1-201ENST00000245414 TTLL5Q6EMB2 1281 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 ZNF526Q8TF50 670 aaPredicted RBP11.61□□□□□ -0.55
IRF1-201ENST00000245414 MX1P20591 662 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 GORABQ5T7V8 394 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 SRLQ86TD4 932 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 EGFL6Q8IUX8 553 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 CHMP3Q9Y3E7 222 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 PRG4Q92954 1404 aaPredicted RBP11.61□□□□□ -0.55
IRF1-201ENST00000245414 ERCC6LQ2NKX8 1250 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
IRF1-201ENST00000245414 TRIM27P14373 513 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 ANKRD20A12PQ8NF67 263 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 ABCA8O94911 1581 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 FIBPO43427 364 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 MAP2K2P36507 400 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 ZCCHC17Q9NP64 241 aaKnown RBP11.6□□□□□ -0.55
IRF1-201ENST00000245414 STAG3Q9UJ98 1225 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 UHRF1BP1Q6BDS2 1440 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 ERBINQ96RT1 1412 aa11.6□□□□□ -0.55
IRF1-201ENST00000245414 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
IRF1-201ENST00000245414 ATP2B1P20020 1258 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 TMEM57Q8N5G2 664 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 NRBP1Q9UHY1 535 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 ARHGAP31Q2M1Z3 1444 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 MNS1Q8NEH6 495 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 C1orf115Q9H7X2 142 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 AP5Z1O43299 807 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 DONSONQ9NYP3 566 aa11.59□□□□□ -0.55
IRF1-201ENST00000245414 CCDC192P0DO97 292 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 ARHGAP29Q52LW3 1261 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 STK26Q9P289 416 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
IRF1-201ENST00000245414 GGT6Q6P531 493 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 PACS2Q86VP3 889 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 CLCN6P51797 869 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 INTS3Q68E01 1043 aaKnown RBP11.58□□□□□ -0.56
IRF1-201ENST00000245414 ATF7IPQ6VMQ6 1270 aa11.58□□□□□ -0.56
IRF1-201ENST00000245414 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms