RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
LTBP4-202ENST00000243562 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
LTBP4-202ENST00000243562 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
LTBP4-202ENST00000243562 NUCB2P80303 420 aa17.46■□□□□ 0.39
LTBP4-202ENST00000243562 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.38
LTBP4-202ENST00000243562 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
LTBP4-202ENST00000243562 ST18O60284 1047 aa17.45■□□□□ 0.38
LTBP4-202ENST00000243562 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
LTBP4-202ENST00000243562 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
LTBP4-202ENST00000243562 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
LTBP4-202ENST00000243562 ESF1Q9H501 851 aaKnown RBP17.45■□□□□ 0.38
LTBP4-202ENST00000243562 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
LTBP4-202ENST00000243562 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
LTBP4-202ENST00000243562 KLHL40Q2TBA0 621 aa17.44■□□□□ 0.38
LTBP4-202ENST00000243562 METP08581 1390 aa17.44■□□□□ 0.38
LTBP4-202ENST00000243562 CHL1O00533 1208 aa17.43■□□□□ 0.38
LTBP4-202ENST00000243562 CAVIN1Q6NZI2 390 aaKnown RBP17.43■□□□□ 0.38
LTBP4-202ENST00000243562 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
LTBP4-202ENST00000243562 PKP1Q13835 747 aa17.43■□□□□ 0.38
LTBP4-202ENST00000243562 HMMRO75330 724 aa17.42■□□□□ 0.38
LTBP4-202ENST00000243562 REC8O95072 547 aa17.42■□□□□ 0.38
LTBP4-202ENST00000243562 FGD1P98174 961 aa17.42■□□□□ 0.38
LTBP4-202ENST00000243562 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
LTBP4-202ENST00000243562 A2ML1A8K2U0 1454 aa17.42■□□□□ 0.38
LTBP4-202ENST00000243562 RICTORQ6R327 1708 aa17.42■□□□□ 0.38
LTBP4-202ENST00000243562 MSH6P52701 1360 aa17.42■□□□□ 0.38
LTBP4-202ENST00000243562 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.384e-7■□□□□ 9.2
LTBP4-202ENST00000243562 F6X3S4 739 aa17.41■□□□□ 0.38
LTBP4-202ENST00000243562 FOXD4L5Q5VV16 416 aaPredicted RBP17.41■□□□□ 0.38
LTBP4-202ENST00000243562 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
LTBP4-202ENST00000243562 FOXD4L4Q8WXT5 416 aaPredicted RBP17.41■□□□□ 0.38
LTBP4-202ENST00000243562 CPS1P31327 1500 aa17.41■□□□□ 0.38
LTBP4-202ENST00000243562 RBM10P98175 930 aaKnown RBP17.41■□□□□ 0.38
LTBP4-202ENST00000243562 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
LTBP4-202ENST00000243562 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
LTBP4-202ENST00000243562 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
LTBP4-202ENST00000243562 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
LTBP4-202ENST00000243562 PTPRCP08575 1304 aa17.4■□□□□ 0.38
LTBP4-202ENST00000243562 ERC2O15083 957 aa17.4■□□□□ 0.38
LTBP4-202ENST00000243562 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
LTBP4-202ENST00000243562 CLEC17AQ6ZS10 378 aa17.39■□□□□ 0.37
LTBP4-202ENST00000243562 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
LTBP4-202ENST00000243562 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
LTBP4-202ENST00000243562 HDGFP51858 240 aaKnown RBP17.38■□□□□ 0.37
LTBP4-202ENST00000243562 G2E3Q7L622 706 aa17.38■□□□□ 0.37
LTBP4-202ENST00000243562 TTC21BQ7Z4L5 1316 aa17.38■□□□□ 0.37
LTBP4-202ENST00000243562 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
LTBP4-202ENST00000243562 FOXO3O43524 673 aa17.38■□□□□ 0.37
LTBP4-202ENST00000243562 TSHZ3Q63HK5 1081 aa17.38■□□□□ 0.37
LTBP4-202ENST00000243562 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
LTBP4-202ENST00000243562 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
LTBP4-202ENST00000243562 LMBRD1Q9NUN5 540 aa17.37■□□□□ 0.37
LTBP4-202ENST00000243562 NEK4P51957 841 aa17.37■□□□□ 0.37
LTBP4-202ENST00000243562 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
LTBP4-202ENST00000243562 ACEP12821 1306 aa17.36■□□□□ 0.37
LTBP4-202ENST00000243562 ZSCAN23Q3MJ62 389 aa17.36■□□□□ 0.37
LTBP4-202ENST00000243562 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
LTBP4-202ENST00000243562 NOL8Q76FK4 1167 aaKnown RBP17.36■□□□□ 0.37
LTBP4-202ENST00000243562 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
LTBP4-202ENST00000243562 PDE1AP54750 535 aa17.36■□□□□ 0.37
LTBP4-202ENST00000243562 CHAMP1Q96JM3 812 aa17.35■□□□□ 0.37
LTBP4-202ENST00000243562 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
LTBP4-202ENST00000243562 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
LTBP4-202ENST00000243562 MSNP26038 577 aaKnown RBP17.35■□□□□ 0.37
LTBP4-202ENST00000243562 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
LTBP4-202ENST00000243562 STK31Q9BXU1 1019 aa17.35■□□□□ 0.37
LTBP4-202ENST00000243562 RBM27Q9P2N5 1060 aaKnown RBP17.35■□□□□ 0.37
LTBP4-202ENST00000243562 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
LTBP4-202ENST00000243562 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
LTBP4-202ENST00000243562 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
LTBP4-202ENST00000243562 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
LTBP4-202ENST00000243562 RGS12O14924 1447 aa17.34■□□□□ 0.37
LTBP4-202ENST00000243562 GNAI2P04899 355 aa17.34■□□□□ 0.37
LTBP4-202ENST00000243562 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
LTBP4-202ENST00000243562 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
LTBP4-202ENST00000243562 PPP1R9BQ96SB3 815 aa17.34■□□□□ 0.37
LTBP4-202ENST00000243562 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.37
LTBP4-202ENST00000243562 AEBP2Q6ZN18 517 aaPredicted RBP17.33■□□□□ 0.37
LTBP4-202ENST00000243562 HSP90AA2PQ14568 343 aaPredicted RBP17.33■□□□□ 0.36
LTBP4-202ENST00000243562 ZNF445P59923 1031 aa17.32■□□□□ 0.36
LTBP4-202ENST00000243562 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
LTBP4-202ENST00000243562 ZSCAN30Q86W11 494 aa17.32■□□□□ 0.36
LTBP4-202ENST00000243562 RBSNQ9H1K0 784 aa17.32■□□□□ 0.36
LTBP4-202ENST00000243562 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
LTBP4-202ENST00000243562 MCCP23508 829 aa17.31■□□□□ 0.36
LTBP4-202ENST00000243562 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
LTBP4-202ENST00000243562 ZDHHC9Q9Y397 364 aa17.31■□□□□ 0.36
LTBP4-202ENST00000243562 AMPHP49418 695 aa17.31■□□□□ 0.36
LTBP4-202ENST00000243562 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
LTBP4-202ENST00000243562 IBTKQ9P2D0 1353 aaPredicted RBP17.3■□□□□ 0.36
LTBP4-202ENST00000243562 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
LTBP4-202ENST00000243562 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
LTBP4-202ENST00000243562 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
LTBP4-202ENST00000243562 FOXD4L6Q3SYB3 417 aaPredicted RBP17.3■□□□□ 0.36
LTBP4-202ENST00000243562 FOXD4L3Q6VB84 417 aaPredicted RBP17.3■□□□□ 0.36
LTBP4-202ENST00000243562 GPT2Q8TD30 523 aa17.3■□□□□ 0.36
LTBP4-202ENST00000243562 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
LTBP4-202ENST00000243562 RIMBP3CA6NJZ7 1639 aa17.28■□□□□ 0.36
LTBP4-202ENST00000243562 RIMBP3BA6NNM3 1639 aa17.28■□□□□ 0.36
LTBP4-202ENST00000243562 RIMBP3Q9UFD9 1639 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms