RNA–Protein interactions for RNA: ENST00000238892.3

CRIPT-201, Transcript of CXXC repeat containing interactor of PDZ3 domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIPT, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIPT-201ENST00000238892 USP35Q9P2H5 1018 aa12.01□□□□□ -0.49
CRIPT-201ENST00000238892 ABCC6O95255 1503 aa12.01□□□□□ -0.49
CRIPT-201ENST00000238892 COL5A2P05997 1499 aaPredicted RBP12□□□□□ -0.49
CRIPT-201ENST00000238892 USP6P35125 1406 aa12□□□□□ -0.49
CRIPT-201ENST00000238892 EVC2Q86UK5 1308 aa12□□□□□ -0.49
CRIPT-201ENST00000238892 QRICH2Q9H0J4 1663 aa12□□□□□ -0.49
CRIPT-201ENST00000238892 GCP02774 474 aa11.99□□□□□ -0.49
CRIPT-201ENST00000238892 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
CRIPT-201ENST00000238892 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
CRIPT-201ENST00000238892 CD2APQ9Y5K6 639 aa11.99□□□□□ -0.49
CRIPT-201ENST00000238892 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
CRIPT-201ENST00000238892 B4GALNT3Q6L9W6 998 aa11.99□□□□□ -0.49
CRIPT-201ENST00000238892 LARP1Q6PKG0 1096 aaKnown RBP11.99□□□□□ -0.49
CRIPT-201ENST00000238892 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
CRIPT-201ENST00000238892 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
CRIPT-201ENST00000238892 PRDM10Q9NQV6 1147 aa11.98□□□□□ -0.49
CRIPT-201ENST00000238892 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
CRIPT-201ENST00000238892 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
CRIPT-201ENST00000238892 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
CRIPT-201ENST00000238892 NUTM2GQ5VZR2 741 aa11.97□□□□□ -0.49
CRIPT-201ENST00000238892 ZBTB47Q9UFB7 747 aaPredicted RBP11.97□□□□□ -0.49
CRIPT-201ENST00000238892 PIK3C2AO00443 1686 aa11.97□□□□□ -0.49
CRIPT-201ENST00000238892 NLRP6P59044 892 aa11.96□□□□□ -0.5
CRIPT-201ENST00000238892 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.5
CRIPT-201ENST00000238892 NBPF1Q3BBV0 1214 aa11.96□□□□□ -0.5
CRIPT-201ENST00000238892 PLEKHG2Q9H7P9 1386 aa11.95□□□□□ -0.5
CRIPT-201ENST00000238892 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
CRIPT-201ENST00000238892 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
CRIPT-201ENST00000238892 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
CRIPT-201ENST00000238892 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
CRIPT-201ENST00000238892 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
CRIPT-201ENST00000238892 HMGB2P26583 209 aaKnown RBP11.94□□□□□ -0.5
CRIPT-201ENST00000238892 SLC27A3Q5K4L6 730 aa11.94□□□□□ -0.5
CRIPT-201ENST00000238892 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
CRIPT-201ENST00000238892 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
CRIPT-201ENST00000238892 ZNF827Q17R98 1081 aa11.93□□□□□ -0.5
CRIPT-201ENST00000238892 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
CRIPT-201ENST00000238892 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
CRIPT-201ENST00000238892 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
CRIPT-201ENST00000238892 TNRC6CQ9HCJ0 1690 aaKnown RBP11.92□□□□□ -0.5
CRIPT-201ENST00000238892 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
CRIPT-201ENST00000238892 RGS19P49795 217 aa11.92□□□□□ -0.5
CRIPT-201ENST00000238892 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
CRIPT-201ENST00000238892 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
CRIPT-201ENST00000238892 CARD10Q9BWT7 1032 aa11.92□□□□□ -0.5
CRIPT-201ENST00000238892 PNPLA7Q6ZV29 1317 aa11.91□□□□□ -0.5
CRIPT-201ENST00000238892 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
CRIPT-201ENST00000238892 COL18A1P39060 1754 aa11.91□□□□□ -0.5
CRIPT-201ENST00000238892 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
CRIPT-201ENST00000238892 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
CRIPT-201ENST00000238892 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
CRIPT-201ENST00000238892 USP31Q70CQ4 1352 aa11.91□□□□□ -0.5
CRIPT-201ENST00000238892 L3MBTL2Q969R5 705 aa11.9□□□□□ -0.5
CRIPT-201ENST00000238892 PUS7Q96PZ0 661 aaKnown RBP11.9□□□□□ -0.5
CRIPT-201ENST00000238892 BTAF1O14981 1849 aa11.9□□□□□ -0.5
CRIPT-201ENST00000238892 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
CRIPT-201ENST00000238892 PTF1AQ7RTS3 328 aa11.9□□□□□ -0.5
CRIPT-201ENST00000238892 SMC1BQ8NDV3 1235 aa11.9□□□□□ -0.5
CRIPT-201ENST00000238892 SIN3AQ96ST3 1273 aa11.9□□□□□ -0.5
CRIPT-201ENST00000238892 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
CRIPT-201ENST00000238892 NFAT5O94916 1531 aa11.88□□□□□ -0.51
CRIPT-201ENST00000238892 NEFMP07197 916 aa11.88□□□□□ -0.51
CRIPT-201ENST00000238892 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
CRIPT-201ENST00000238892 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
CRIPT-201ENST00000238892 ZBTB7CA1YPR0 619 aa11.87□□□□□ -0.51
CRIPT-201ENST00000238892 CSB-PGBD3P0DP91 1061 aa11.87□□□□□ -0.51
CRIPT-201ENST00000238892 EXOC5O00471 708 aa11.87□□□□□ -0.51
CRIPT-201ENST00000238892 CTCFP49711 727 aaPredicted RBP11.87□□□□□ -0.51
CRIPT-201ENST00000238892 KDM2BQ8NHM5 1336 aa11.87□□□□□ -0.51
CRIPT-201ENST00000238892 MON2Q7Z3U7 1717 aa11.86□□□□□ -0.51
CRIPT-201ENST00000238892 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
CRIPT-201ENST00000238892 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
CRIPT-201ENST00000238892 HTRA3P83110 453 aa11.85□□□□□ -0.51
CRIPT-201ENST00000238892 PKD1L3Q7Z443 1732 aa11.85□□□□□ -0.51
CRIPT-201ENST00000238892 EDC4Q6P2E9 1401 aaKnown RBP11.85□□□□□ -0.51
CRIPT-201ENST00000238892 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
CRIPT-201ENST00000238892 IGSF1Q8N6C5 1336 aa11.85□□□□□ -0.51
CRIPT-201ENST00000238892 AIDAQ96BJ3 306 aa11.85□□□□□ -0.51
CRIPT-201ENST00000238892 ABHD8Q96I13 439 aa11.85□□□□□ -0.51
CRIPT-201ENST00000238892 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
CRIPT-201ENST00000238892 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
CRIPT-201ENST00000238892 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
CRIPT-201ENST00000238892 FLAD1Q8NFF5 587 aa11.83□□□□□ -0.52
CRIPT-201ENST00000238892 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
CRIPT-201ENST00000238892 LAS1LQ9Y4W2 734 aaKnown RBP11.83□□□□□ -0.52
CRIPT-201ENST00000238892 RNF123Q5XPI4 1314 aa11.82□□□□□ -0.52
CRIPT-201ENST00000238892 ERBB3P21860 1342 aa11.82□□□□□ -0.52
CRIPT-201ENST00000238892 IL2RBP14784 551 aa11.81□□□□□ -0.52
CRIPT-201ENST00000238892 GSE1Q14687 1217 aa11.81□□□□□ -0.52
CRIPT-201ENST00000238892 FAM208AQ9UK61 1670 aaKnown RBP11.81□□□□□ -0.52
CRIPT-201ENST00000238892 LY75O60449 1722 aa11.8□□□□□ -0.52
CRIPT-201ENST00000238892 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
CRIPT-201ENST00000238892 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
CRIPT-201ENST00000238892 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
CRIPT-201ENST00000238892 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
CRIPT-201ENST00000238892 CCDC184Q52MB2 194 aa11.79□□□□□ -0.52
CRIPT-201ENST00000238892 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
CRIPT-201ENST00000238892 NLRP2Q9NX02 1062 aa11.78□□□□□ -0.52
CRIPT-201ENST00000238892 TONSLQ96HA7 1378 aa11.78□□□□□ -0.52
CRIPT-201ENST00000238892 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms