RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 MVPQ14764 893 aaKnown RBP28.38■■■□□ 2.13
GCA-201ENST00000233612 TWISTNBQ3B726 338 aaPredicted RBP28.38■■■□□ 2.13
GCA-201ENST00000233612 NBPF6Q5VWK0 638 aa28.38■■■□□ 2.13
GCA-201ENST00000233612 TSPYL6Q8N831 410 aa28.38■■■□□ 2.13
GCA-201ENST00000233612 NBPF4Q96M43 638 aa28.38■■■□□ 2.13
GCA-201ENST00000233612 RBM19Q9Y4C8 960 aaKnown RBP28.38■■■□□ 2.13
GCA-201ENST00000233612 LMOD2Q6P5Q4 547 aa28.38■■■□□ 2.13
GCA-201ENST00000233612 C8orf58Q8NAV2 365 aa28.38■■■□□ 2.13
GCA-201ENST00000233612 TNNQ9UQP3 1299 aa28.38■■■□□ 2.13
GCA-201ENST00000233612 TCERG1O14776 1098 aaKnown RBP28.37■■■□□ 2.13
GCA-201ENST00000233612 MRPL50Q8N5N7 158 aaKnown RBP28.37■■■□□ 2.13
GCA-201ENST00000233612 TNS3Q68CZ2 1445 aa28.37■■■□□ 2.13
GCA-201ENST00000233612 LRRC37A3O60309 1634 aa28.36■■■□□ 2.13
GCA-201ENST00000233612 GNAT3A8MTJ3 354 aa28.36■■■□□ 2.13
GCA-201ENST00000233612 ZNF335Q9H4Z2 1342 aaPredicted RBP28.36■■■□□ 2.13
GCA-201ENST00000233612 CAMTA1Q9Y6Y1 1673 aa28.36■■■□□ 2.13
GCA-201ENST00000233612 BABAM1Q9NWV8 329 aa28.35■■■□□ 2.13
GCA-201ENST00000233612 FTSJ3Q8IY81 847 aaKnown RBP28.35■■■□□ 2.13
GCA-201ENST00000233612 SPATA31A3Q5VYP0 1347 aa28.35■■■□□ 2.13
GCA-201ENST00000233612 BRINP3Q76B58 766 aa28.33■■■□□ 2.13
GCA-201ENST00000233612 ABCC6O95255 1503 aa28.33■■■□□ 2.13
GCA-201ENST00000233612 MAP3K5Q99683 1374 aa28.33■■■□□ 2.12
GCA-201ENST00000233612 RGPD2P0DJD1 1756 aa28.32■■■□□ 2.12
GCA-201ENST00000233612 DDX17Q92841 729 aaKnown RBP28.31■■■□□ 2.12
GCA-201ENST00000233612 SLAIN2Q9P270 581 aa28.31■■■□□ 2.12
GCA-201ENST00000233612 DDX19BQ9UMR2 479 aa28.31■■■□□ 2.12
GCA-201ENST00000233612 CRYBG1Q9Y4K1 1723 aa28.31■■■□□ 2.12
GCA-201ENST00000233612 ANKRD24Q8TF21 1146 aa28.3■■■□□ 2.12
GCA-201ENST00000233612 AXIN2Q9Y2T1 843 aa28.3■■■□□ 2.12
GCA-201ENST00000233612 COL18A1P39060 1754 aa28.29■■■□□ 2.12
GCA-201ENST00000233612 USHBP1Q8N6Y0 703 aa28.29■■■□□ 2.12
GCA-201ENST00000233612 IL17REQ8NFR9 667 aa28.28■■■□□ 2.12
GCA-201ENST00000233612 LMO7Q8WWI1 1683 aa28.28■■■□□ 2.12
GCA-201ENST00000233612 SOS2Q07890 1332 aaPredicted RBP28.27■■■□□ 2.12
GCA-201ENST00000233612 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
GCA-201ENST00000233612 AMOTQ4VCS5 1084 aa28.27■■■□□ 2.12
GCA-201ENST00000233612 ZBTB7CA1YPR0 619 aa28.26■■■□□ 2.12
GCA-201ENST00000233612 IGHDP01880 384 aa28.26■■■□□ 2.11
GCA-201ENST00000233612 LRRC59Q96AG4 307 aaKnown RBP28.26■■■□□ 2.11
GCA-201ENST00000233612 CPDO75976 1380 aa28.25■■■□□ 2.11
GCA-201ENST00000233612 CEMIPQ8WUJ3 1361 aa28.25■■■□□ 2.11
GCA-201ENST00000233612 RGPD5Q99666 1765 aa28.25■■■□□ 2.11
GCA-201ENST00000233612 SOS1Q07889 1333 aaPredicted RBP28.25■■■□□ 2.11
GCA-201ENST00000233612 TSPYL4Q9UJ04 414 aa28.25■■■□□ 2.11
GCA-201ENST00000233612 PCDHB15Q9Y5E8 787 aa28.25■■■□□ 2.11
GCA-201ENST00000233612 ERBB3P21860 1342 aa28.24■■■□□ 2.11
GCA-201ENST00000233612 PLEKHO1Q53GL0 409 aaPredicted RBP28.24■■■□□ 2.11
GCA-201ENST00000233612 TMEM57Q8N5G2 664 aa28.24■■■□□ 2.11
GCA-201ENST00000233612 ZC3H6P61129 1189 aaKnown RBP28.23■■■□□ 2.11
GCA-201ENST00000233612 PLEKHG2Q9H7P9 1386 aa28.23■■■□□ 2.11
GCA-201ENST00000233612 TAF7Q15545 349 aaPredicted RBP28.23■■■□□ 2.11
GCA-201ENST00000233612 API5Q9BZZ5 524 aaKnown RBP28.22■■■□□ 2.11
GCA-201ENST00000233612 CHMP4BQ9H444 224 aaKnown RBP28.22■■■□□ 2.11
GCA-201ENST00000233612 AKAP4Q5JQC9 854 aa28.21■■■□□ 2.11
GCA-201ENST00000233612 ZBTB40Q9NUA8 1239 aa28.21■■■□□ 2.11
GCA-201ENST00000233612 ABCC4O15439 1325 aa28.21■■■□□ 2.11
GCA-201ENST00000233612 ITPRIPQ8IWB1 547 aa28.19■■■□□ 2.1
GCA-201ENST00000233612 RWDD1Q9H446 243 aaPredicted RBP28.19■■■□□ 2.1
GCA-201ENST00000233612 FAM208AQ9UK61 1670 aaKnown RBP28.19■■■□□ 2.1
GCA-201ENST00000233612 MIS18AQ9NYP9 233 aa28.19■■■□□ 2.1
GCA-201ENST00000233612 OVOS2A0A0G2JMS6 1433 aa28.18■■■□□ 2.1
GCA-201ENST00000233612 KRT24Q2M2I5 525 aa28.18■■■□□ 2.1
GCA-201ENST00000233612 HDAC1Q13547 482 aaPredicted RBP28.16■■■□□ 2.1
GCA-201ENST00000233612 PLEKHG5O94827 1062 aa28.15■■■□□ 2.1
GCA-201ENST00000233612 CABLES1Q8TDN4 633 aa28.15■■■□□ 2.1
GCA-201ENST00000233612 PTPRCP08575 1304 aa28.15■■■□□ 2.1
GCA-201ENST00000233612 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.1
GCA-201ENST00000233612 ZBTB7BO15156 539 aaPredicted RBP28.14■■■□□ 2.1
GCA-201ENST00000233612 ZNF530Q6P9A1 599 aaPredicted RBP28.13■■■□□ 2.09
GCA-201ENST00000233612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.13■■■□□ 2.09
GCA-201ENST00000233612 CACNA1FO60840 1977 aa28.12■■■□□ 2.09
GCA-201ENST00000233612 ADAMTS7Q9UKP4 1686 aa28.12■■■□□ 2.09
GCA-201ENST00000233612 INTS3Q68E01 1043 aaKnown RBP28.1■■■□□ 2.09
GCA-201ENST00000233612 LGR6Q9HBX8 967 aa28.1■■■□□ 2.09
GCA-201ENST00000233612 BACH2Q9BYV9 841 aa28.1■■■□□ 2.09
GCA-201ENST00000233612 KDM3BQ7LBC6 1761 aa28.09■■■□□ 2.09
GCA-201ENST00000233612 PDE4AP27815 886 aa28.09■■■□□ 2.09
GCA-201ENST00000233612 C1orf141Q5JVX7 400 aa28.09■■■□□ 2.09
GCA-201ENST00000233612 RGS12O14924 1447 aa28.09■■■□□ 2.09
GCA-201ENST00000233612 VIRMAQ69YN4 1812 aaKnown RBP28.07■■■□□ 2.08
GCA-201ENST00000233612 RNMTO43148 476 aaKnown RBP28.07■■■□□ 2.08
GCA-201ENST00000233612 SLC4A2P04920 1241 aa28.07■■■□□ 2.08
GCA-201ENST00000233612 HOXB7P09629 217 aa28.07■■■□□ 2.08
GCA-201ENST00000233612 SKAP1Q86WV1 359 aa28.07■■■□□ 2.08
GCA-201ENST00000233612 NLRP2Q9NX02 1062 aa28.07■■■□□ 2.08
GCA-201ENST00000233612 CCDC30Q5VVM6 783 aa28.06■■■□□ 2.08
GCA-201ENST00000233612 RAPGEF4Q8WZA2 1011 aa28.06■■■□□ 2.08
GCA-201ENST00000233612 CHMP4AQ9BY43 222 aa28.06■■■□□ 2.08
GCA-201ENST00000233612 ABCA3Q99758 1704 aa28.04■■■□□ 2.08
GCA-201ENST00000233612 TATP17735 454 aaPredicted RBP28.03■■■□□ 2.08
GCA-201ENST00000233612 TEFQ10587 303 aa28.03■■■□□ 2.08
GCA-201ENST00000233612 CHRNA2Q15822 529 aa28.03■■■□□ 2.08
GCA-201ENST00000233612 EIF4A1P60842 406 aaKnown RBP28.03■■■□□ 2.08
GCA-201ENST00000233612 MPRIPQ6WCQ1 1025 aa28.03■■■□□ 2.08
GCA-201ENST00000233612 SMC5Q8IY18 1101 aa28.03■■■□□ 2.08
GCA-201ENST00000233612 STK31Q9BXU1 1019 aa28.03■■■□□ 2.08
GCA-201ENST00000233612 SIPA1L3O60292 1781 aaPredicted RBP28.02■■■□□ 2.08
GCA-201ENST00000233612 SPG7Q9UQ90 795 aa28.02■■■□□ 2.08
GCA-201ENST00000233612 CSB-PGBD3P0DP91 1061 aa28■■■□□ 2.07
GCA-201ENST00000233612 PDZRN3Q9UPQ7 1066 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms