RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TRIM35Q9UPQ4 493 aa21.82■■□□□ 1.08
CDKN1B-201ENST00000228872 MTERF4Q7Z6M4 381 aaKnown RBP21.82■■□□□ 1.08
CDKN1B-201ENST00000228872 DYNC1I1O14576 645 aa21.81■■□□□ 1.08
CDKN1B-201ENST00000228872 SMAP1Q8IYB5 467 aaPredicted RBP21.81■■□□□ 1.08
CDKN1B-201ENST00000228872 AMOTL2Q9Y2J4 779 aa21.81■■□□□ 1.08
CDKN1B-201ENST00000228872 CYP2E1P05181 493 aaPredicted RBP21.81■■□□□ 1.08
CDKN1B-201ENST00000228872 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
CDKN1B-201ENST00000228872 NUCB2P80303 420 aa21.81■■□□□ 1.08
CDKN1B-201ENST00000228872 CSPP1Q1MSJ5 1256 aa21.81■■□□□ 1.08
CDKN1B-201ENST00000228872 KIF20BQ96Q89 1820 aa21.8■■□□□ 1.08
CDKN1B-201ENST00000228872 TOPAZ1Q8N9V7 1692 aa21.8■■□□□ 1.08
CDKN1B-201ENST00000228872 PRIM1P49642 420 aaKnown RBP21.8■■□□□ 1.08
CDKN1B-201ENST00000228872 PODXL2Q9NZ53 605 aa21.8■■□□□ 1.08
CDKN1B-201ENST00000228872 MCM5P33992 734 aa21.79■■□□□ 1.08
CDKN1B-201ENST00000228872 GCC1Q96CN9 775 aa21.79■■□□□ 1.08
CDKN1B-201ENST00000228872 PLEKHF1Q96S99 279 aa21.79■■□□□ 1.08
CDKN1B-201ENST00000228872 IL16Q14005 1332 aa21.79■■□□□ 1.08
CDKN1B-201ENST00000228872 PPIP5K1Q6PFW1 1433 aa21.78■■□□□ 1.08
CDKN1B-201ENST00000228872 AKAP12Q02952 1782 aa21.78■■□□□ 1.08
CDKN1B-201ENST00000228872 CDC42BPGQ6DT37 1551 aa21.77■■□□□ 1.08
CDKN1B-201ENST00000228872 CABP1Q9NZU7 370 aa21.77■■□□□ 1.08
CDKN1B-201ENST00000228872 ITSN1Q15811 1721 aa21.77■■□□□ 1.08
CDKN1B-201ENST00000228872 MON2Q7Z3U7 1717 aa21.77■■□□□ 1.08
CDKN1B-201ENST00000228872 CDC45O75419 566 aa21.77■■□□□ 1.08
CDKN1B-201ENST00000228872 HDGFL2Q7Z4V5 671 aaPredicted RBP21.77■■□□□ 1.08
CDKN1B-201ENST00000228872 RABEP1Q15276 862 aa21.76■■□□□ 1.07
CDKN1B-201ENST00000228872 SASS6Q6UVJ0 657 aa21.76■■□□□ 1.07
CDKN1B-201ENST00000228872 CPSF1Q10570 1443 aaKnown RBP21.75■■□□□ 1.07
CDKN1B-201ENST00000228872 RBM27Q9P2N5 1060 aaKnown RBP21.75■■□□□ 1.07
CDKN1B-201ENST00000228872 NPHP4O75161 1426 aaPredicted RBP21.75■■□□□ 1.07
CDKN1B-201ENST00000228872 PKP1Q13835 747 aa21.74■■□□□ 1.07
CDKN1B-201ENST00000228872 ALDH1L2Q3SY69 923 aa21.74■■□□□ 1.07
CDKN1B-201ENST00000228872 GPT2Q8TD30 523 aa21.74■■□□□ 1.07
CDKN1B-201ENST00000228872 NUDT16Q96DE0 195 aaKnown RBP21.74■■□□□ 1.07
CDKN1B-201ENST00000228872 CCDC39Q9UFE4 941 aa21.74■■□□□ 1.07
CDKN1B-201ENST00000228872 AK9Q5TCS8 1911 aa21.74■■□□□ 1.07
CDKN1B-201ENST00000228872 ARID3AQ99856 593 aa21.73■■□□□ 1.07
CDKN1B-201ENST00000228872 U2SURPO15042 1029 aaKnown RBP21.73■■□□□ 1.07
CDKN1B-201ENST00000228872 ZBTB7BO15156 539 aaPredicted RBP21.73■■□□□ 1.07
CDKN1B-201ENST00000228872 PRPF40AO75400 957 aaKnown RBP21.73■■□□□ 1.07
CDKN1B-201ENST00000228872 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
CDKN1B-201ENST00000228872 C1orf115Q9H7X2 142 aa21.72■■□□□ 1.07
CDKN1B-201ENST00000228872 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
CDKN1B-201ENST00000228872 LRSAM1Q6UWE0 723 aa21.72■■□□□ 1.07
CDKN1B-201ENST00000228872 PRR36Q9H6K5 1346 aa21.7■■□□□ 1.06
CDKN1B-201ENST00000228872 CWC22Q9HCG8 908 aaKnown RBP21.7■■□□□ 1.06
CDKN1B-201ENST00000228872 GSPT1P15170 499 aaKnown RBP21.7■■□□□ 1.06
CDKN1B-201ENST00000228872 TMEM63CQ9P1W3 806 aa21.69■■□□□ 1.06
CDKN1B-201ENST00000228872 EDC4Q6P2E9 1401 aaKnown RBP21.69■■□□□ 1.06
CDKN1B-201ENST00000228872 FYB1O15117 783 aa21.69■■□□□ 1.06
CDKN1B-201ENST00000228872 KCNA6P17658 529 aa21.69■■□□□ 1.06
CDKN1B-201ENST00000228872 SIRT2Q8IXJ6 389 aa21.69■■□□□ 1.06
CDKN1B-201ENST00000228872 NWD1Q149M9 1564 aa21.68■■□□□ 1.06
CDKN1B-201ENST00000228872 FMN2Q9NZ56 1722 aa21.68■■□□□ 1.06
CDKN1B-201ENST00000228872 BRPF1P55201 1214 aaPredicted RBP21.68■■□□□ 1.06
CDKN1B-201ENST00000228872 CHMP4BQ9H444 224 aaKnown RBP21.68■■□□□ 1.06
CDKN1B-201ENST00000228872 NRKQ7Z2Y5 1582 aa21.67■■□□□ 1.06
CDKN1B-201ENST00000228872 SYCE3A1L190 88 aa21.67■■□□□ 1.06
CDKN1B-201ENST00000228872 PRDM10Q9NQV6 1147 aa21.67■■□□□ 1.06
CDKN1B-201ENST00000228872 ZDHHC9Q9Y397 364 aa21.67■■□□□ 1.06
CDKN1B-201ENST00000228872 NALCNQ8IZF0 1738 aa21.67■■□□□ 1.06
CDKN1B-201ENST00000228872 CCDC94Q9BW85 323 aaPredicted RBP21.67■■□□□ 1.06
CDKN1B-201ENST00000228872 COL3A1P02461 1466 aaPredicted RBP21.67■■□□□ 1.06
CDKN1B-201ENST00000228872 ZGPATQ8N5A5 531 aaKnown RBP21.66■■□□□ 1.06
CDKN1B-201ENST00000228872 USP26Q9BXU7 913 aa21.66■■□□□ 1.06
CDKN1B-201ENST00000228872 RGPD8O14715 1765 aaPredicted RBP21.66■■□□□ 1.06
CDKN1B-201ENST00000228872 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.06
CDKN1B-201ENST00000228872 PLEKHM2Q8IWE5 1019 aa21.64■■□□□ 1.05
CDKN1B-201ENST00000228872 CFAP44Q96MT7 982 aa21.64■■□□□ 1.05
CDKN1B-201ENST00000228872 PLEKHG3A1L390 1219 aa21.63■■□□□ 1.05
CDKN1B-201ENST00000228872 ANKARQ7Z5J8 1434 aa21.63■■□□□ 1.05
CDKN1B-201ENST00000228872 UTP14CQ5TAP6 766 aaKnown RBP21.63■■□□□ 1.05
CDKN1B-201ENST00000228872 ZNF428Q96B54 188 aa21.63■■□□□ 1.05
CDKN1B-201ENST00000228872 NCKAP5LQ9HCH0 1330 aa21.63■■□□□ 1.05
CDKN1B-201ENST00000228872 CHAMP1Q96JM3 812 aa21.63■■□□□ 1.05
CDKN1B-201ENST00000228872 DMTNQ08495 405 aa21.62■■□□□ 1.05
CDKN1B-201ENST00000228872 KIAA2012Q0VF49 1180 aa21.62■■□□□ 1.05
CDKN1B-201ENST00000228872 MRPL50Q8N5N7 158 aaKnown RBP21.62■■□□□ 1.05
CDKN1B-201ENST00000228872 MYRIPQ8NFW9 859 aa21.62■■□□□ 1.05
CDKN1B-201ENST00000228872 RNF214Q8ND24 703 aa21.62■■□□□ 1.05
CDKN1B-201ENST00000228872 ARHGAP45Q92619 1136 aa21.62■■□□□ 1.05
CDKN1B-201ENST00000228872 ZHX1Q9UKY1 873 aaPredicted RBP21.62■■□□□ 1.05
CDKN1B-201ENST00000228872 TTC22Q5TAA0 569 aa21.61■■□□□ 1.05
CDKN1B-201ENST00000228872 ST18O60284 1047 aa21.6■■□□□ 1.05
CDKN1B-201ENST00000228872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
CDKN1B-201ENST00000228872 PTMAP06454 111 aaKnown RBP21.6■■□□□ 1.05
CDKN1B-201ENST00000228872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.6■■□□□ 1.05
CDKN1B-201ENST00000228872 MBD3O95983 291 aa21.59■■□□□ 1.05
CDKN1B-201ENST00000228872 KDM4FA0A1W2PPD8 638 aa21.59■■□□□ 1.05
CDKN1B-201ENST00000228872 INTS3Q68E01 1043 aaKnown RBP21.59■■□□□ 1.05
CDKN1B-201ENST00000228872 ABCC4O15439 1325 aa21.58■■□□□ 1.05
CDKN1B-201ENST00000228872 ZSCAN20P17040 1043 aaPredicted RBP21.58■■□□□ 1.04
CDKN1B-201ENST00000228872 PLEKHG5O94827 1062 aa21.57■■□□□ 1.04
CDKN1B-201ENST00000228872 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
CDKN1B-201ENST00000228872 VAMP4O75379 141 aa21.57■■□□□ 1.04
CDKN1B-201ENST00000228872 USP6P35125 1406 aa21.57■■□□□ 1.04
CDKN1B-201ENST00000228872 ACEP12821 1306 aa21.57■■□□□ 1.04
CDKN1B-201ENST00000228872 TSPY26PQ9H489 355 aa21.56■■□□□ 1.04
CDKN1B-201ENST00000228872 ADGRL3Q9HAR2 1447 aa21.56■■□□□ 1.04
CDKN1B-201ENST00000228872 ZNF710Q8N1W2 664 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms