RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
FRG1-201ENST00000226798 LY75O60449 1722 aa16.5■□□□□ 0.23
FRG1-201ENST00000226798 A0A1W2PP64 1363 aa16.5■□□□□ 0.23
FRG1-201ENST00000226798 ARXQ96QS3 562 aa16.49■□□□□ 0.23
FRG1-201ENST00000226798 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
FRG1-201ENST00000226798 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
FRG1-201ENST00000226798 RGPD2P0DJD1 1756 aa16.48■□□□□ 0.23
FRG1-201ENST00000226798 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
FRG1-201ENST00000226798 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
FRG1-201ENST00000226798 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
FRG1-201ENST00000226798 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
FRG1-201ENST00000226798 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
FRG1-201ENST00000226798 IP6K1Q92551 441 aa16.45■□□□□ 0.22
FRG1-201ENST00000226798 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
FRG1-201ENST00000226798 NSD2O96028 1365 aa16.44■□□□□ 0.22
FRG1-201ENST00000226798 SLC27A3Q5K4L6 730 aa16.44■□□□□ 0.22
FRG1-201ENST00000226798 PUS7Q96PZ0 661 aaKnown RBP16.44■□□□□ 0.22
FRG1-201ENST00000226798 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
FRG1-201ENST00000226798 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
FRG1-201ENST00000226798 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
FRG1-201ENST00000226798 MEGF6O75095 1541 aa16.42■□□□□ 0.22
FRG1-201ENST00000226798 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
FRG1-201ENST00000226798 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
FRG1-201ENST00000226798 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
FRG1-201ENST00000226798 HOXC9P31274 260 aa16.39■□□□□ 0.21
FRG1-201ENST00000226798 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
FRG1-201ENST00000226798 C5P01031 1676 aa16.39■□□□□ 0.21
FRG1-201ENST00000226798 POLD1P28340 1107 aa16.38■□□□□ 0.21
FRG1-201ENST00000226798 TESK2Q96S53 571 aa16.38■□□□□ 0.21
FRG1-201ENST00000226798 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
FRG1-201ENST00000226798 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
FRG1-201ENST00000226798 KCNQ4P56696 695 aa16.37■□□□□ 0.21
FRG1-201ENST00000226798 C1QTNF8P60827 252 aa16.37■□□□□ 0.21
FRG1-201ENST00000226798 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
FRG1-201ENST00000226798 GPR162Q16538 588 aa16.36■□□□□ 0.21
FRG1-201ENST00000226798 SYTL4Q96C24 671 aaPredicted RBP16.36■□□□□ 0.21
FRG1-201ENST00000226798 COG3Q96JB2 828 aa16.36■□□□□ 0.21
FRG1-201ENST00000226798 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
FRG1-201ENST00000226798 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
FRG1-201ENST00000226798 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
FRG1-201ENST00000226798 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
FRG1-201ENST00000226798 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
FRG1-201ENST00000226798 FBLN1P23142 703 aa16.34■□□□□ 0.21
FRG1-201ENST00000226798 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
FRG1-201ENST00000226798 NLGN2Q8NFZ4 835 aa16.34■□□□□ 0.21
FRG1-201ENST00000226798 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.21
FRG1-201ENST00000226798 AMPHP49418 695 aa16.33■□□□□ 0.2
FRG1-201ENST00000226798 CCNL1Q9UK58 526 aaPredicted RBP16.33■□□□□ 0.2
FRG1-201ENST00000226798 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
FRG1-201ENST00000226798 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
FRG1-201ENST00000226798 USP47Q96K76 1375 aa16.32■□□□□ 0.2
FRG1-201ENST00000226798 ITGB4P16144 1822 aa16.31■□□□□ 0.2
FRG1-201ENST00000226798 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
FRG1-201ENST00000226798 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
FRG1-201ENST00000226798 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
FRG1-201ENST00000226798 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
FRG1-201ENST00000226798 COL23A1Q86Y22 540 aaPredicted RBP16.3■□□□□ 0.2
FRG1-201ENST00000226798 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
FRG1-201ENST00000226798 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
FRG1-201ENST00000226798 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
FRG1-201ENST00000226798 RRS1Q15050 365 aaKnown RBP16.29■□□□□ 0.2
FRG1-201ENST00000226798 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
FRG1-201ENST00000226798 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
FRG1-201ENST00000226798 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
FRG1-201ENST00000226798 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
FRG1-201ENST00000226798 FYB1O15117 783 aa16.28■□□□□ 0.2
FRG1-201ENST00000226798 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
FRG1-201ENST00000226798 INSRP06213 1382 aa16.27■□□□□ 0.2
FRG1-201ENST00000226798 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.2
FRG1-201ENST00000226798 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
FRG1-201ENST00000226798 MAP2P11137 1827 aaKnown RBP16.26■□□□□ 0.19
FRG1-201ENST00000226798 PCDH11XQ9BZA7 1347 aa16.26■□□□□ 0.19
FRG1-201ENST00000226798 PCDH11YQ9BZA8 1340 aa16.26■□□□□ 0.19
FRG1-201ENST00000226798 POLA2Q14181 598 aa16.26■□□□□ 0.19
FRG1-201ENST00000226798 GGNBP2Q9H3C7 697 aa16.26■□□□□ 0.19
FRG1-201ENST00000226798 FLT4P35916 1363 aa16.26■□□□□ 0.19
FRG1-201ENST00000226798 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
FRG1-201ENST00000226798 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
FRG1-201ENST00000226798 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
FRG1-201ENST00000226798 TATP17735 454 aaPredicted RBP16.24■□□□□ 0.19
FRG1-201ENST00000226798 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
FRG1-201ENST00000226798 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
FRG1-201ENST00000226798 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
FRG1-201ENST00000226798 ATP10DQ9P241 1426 aa16.22■□□□□ 0.19
FRG1-201ENST00000226798 CYP27B1O15528 508 aa16.22■□□□□ 0.19
FRG1-201ENST00000226798 FLAD1Q8NFF5 587 aa16.22■□□□□ 0.19
FRG1-201ENST00000226798 ADCY9O60503 1353 aa16.22■□□□□ 0.19
FRG1-201ENST00000226798 HMGB2P26583 209 aaKnown RBP16.21■□□□□ 0.19
FRG1-201ENST00000226798 TMF1P82094 1093 aa16.21■□□□□ 0.19
FRG1-201ENST00000226798 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
FRG1-201ENST00000226798 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
FRG1-201ENST00000226798 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
FRG1-201ENST00000226798 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
FRG1-201ENST00000226798 CICQ96RK0 1608 aaPredicted RBP16.17■□□□□ 0.18
FRG1-201ENST00000226798 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
FRG1-201ENST00000226798 AK7Q96M32 723 aa16.17■□□□□ 0.18
FRG1-201ENST00000226798 EMILIN1Q9Y6C2 1016 aa16.17■□□□□ 0.18
FRG1-201ENST00000226798 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
FRG1-201ENST00000226798 KIAA1551Q9HCM1 1747 aa16.16■□□□□ 0.18
FRG1-201ENST00000226798 PIGBQ92521 554 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 288.4 ms