RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 PARP4Q9UKK3 1724 aaKnown RBP20.02■□□□□ 0.79
RPA3-201ENST00000223129 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
RPA3-201ENST00000223129 RSPH6AQ9H0K4 717 aa20.01■□□□□ 0.79
RPA3-201ENST00000223129 OVOS2A0A0G2JMS6 1433 aa20■□□□□ 0.79
RPA3-201ENST00000223129 ZCRB1Q8TBF4 217 aaKnown RBP20■□□□□ 0.79
RPA3-201ENST00000223129 LRRC37A3O60309 1634 aa20■□□□□ 0.79
RPA3-201ENST00000223129 PRKAR2BP31323 418 aa20■□□□□ 0.79
RPA3-201ENST00000223129 FAM182BQ5T319 152 aa20■□□□□ 0.79
RPA3-201ENST00000223129 ADAMTS8Q9UP79 889 aa20■□□□□ 0.79
RPA3-201ENST00000223129 FCHSD2O94868 740 aa19.99■□□□□ 0.79
RPA3-201ENST00000223129 PDE3BQ13370 1112 aa19.99■□□□□ 0.79
RPA3-201ENST00000223129 ILDR2Q71H61 639 aa19.99■□□□□ 0.79
RPA3-201ENST00000223129 PNISRQ8TF01 805 aaKnown RBP19.99■□□□□ 0.79
RPA3-201ENST00000223129 DDX54Q8TDD1 881 aaKnown RBP19.98■□□□□ 0.79
RPA3-201ENST00000223129 KRT27Q7Z3Y8 459 aa19.98■□□□□ 0.79
RPA3-201ENST00000223129 PHACTR3Q96KR7 559 aa19.97■□□□□ 0.79
RPA3-201ENST00000223129 TNS2Q63HR2 1409 aa19.97■□□□□ 0.79
RPA3-201ENST00000223129 CCER2I3L3R5 266 aa19.97■□□□□ 0.79
RPA3-201ENST00000223129 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
RPA3-201ENST00000223129 PLEKHO1Q53GL0 409 aaPredicted RBP19.95■□□□□ 0.78
RPA3-201ENST00000223129 SPG7Q9UQ90 795 aa19.95■□□□□ 0.78
RPA3-201ENST00000223129 SHANK3Q9BYB0 1731 aa19.95■□□□□ 0.78
RPA3-201ENST00000223129 CCDC146Q8IYE0 955 aa19.95■□□□□ 0.78
RPA3-201ENST00000223129 PLEKHF1Q96S99 279 aa19.95■□□□□ 0.78
RPA3-201ENST00000223129 PKD1L3Q7Z443 1732 aa19.94■□□□□ 0.78
RPA3-201ENST00000223129 CYP27B1O15528 508 aa19.94■□□□□ 0.78
RPA3-201ENST00000223129 MTHFSDQ2M296 383 aaKnown RBP19.94■□□□□ 0.78
RPA3-201ENST00000223129 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
RPA3-201ENST00000223129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.94■□□□□ 0.78
RPA3-201ENST00000223129 AMOTQ4VCS5 1084 aa19.93■□□□□ 0.78
RPA3-201ENST00000223129 PCDH11XQ9BZA7 1347 aa19.92■□□□□ 0.78
RPA3-201ENST00000223129 PCDH11YQ9BZA8 1340 aa19.92■□□□□ 0.78
RPA3-201ENST00000223129 EP400Q96L91 3159 aa19.92■□□□□ 0.78
RPA3-201ENST00000223129 ZNF530Q6P9A1 599 aaPredicted RBP19.92■□□□□ 0.78
RPA3-201ENST00000223129 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
RPA3-201ENST00000223129 PHKG2P15735 406 aa19.9■□□□□ 0.78
RPA3-201ENST00000223129 PLEKHG2Q9H7P9 1386 aa19.9■□□□□ 0.78
RPA3-201ENST00000223129 IFNL2Q8IZJ0 200 aa19.9■□□□□ 0.78
RPA3-201ENST00000223129 MAPK8IP3Q9UPT6 1336 aa19.88■□□□□ 0.77
RPA3-201ENST00000223129 NEFMP07197 916 aa19.88■□□□□ 0.77
RPA3-201ENST00000223129 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
RPA3-201ENST00000223129 SENP3-EIF4A1A0A087X0R7 540 aa19.87■□□□□ 0.77
RPA3-201ENST00000223129 C1orf141Q5JVX7 400 aa19.87■□□□□ 0.77
RPA3-201ENST00000223129 GAS2L2Q8NHY3 880 aa19.87■□□□□ 0.77
RPA3-201ENST00000223129 FAM196AQ6ZSG2 479 aa19.86■□□□□ 0.77
RPA3-201ENST00000223129 AKAP4Q5JQC9 854 aa19.86■□□□□ 0.77
RPA3-201ENST00000223129 MPRIPQ6WCQ1 1025 aa19.86■□□□□ 0.77
RPA3-201ENST00000223129 ACSBG1Q96GR2 724 aa19.86■□□□□ 0.77
RPA3-201ENST00000223129 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
RPA3-201ENST00000223129 NKX1-1Q15270 411 aaPredicted RBP19.85■□□□□ 0.77
RPA3-201ENST00000223129 RRP7AQ9Y3A4 280 aaKnown RBP19.85■□□□□ 0.77
RPA3-201ENST00000223129 NEUROD2Q15784 382 aa19.83■□□□□ 0.77
RPA3-201ENST00000223129 NFE2L2Q16236 605 aa19.83■□□□□ 0.77
RPA3-201ENST00000223129 GNAT3A8MTJ3 354 aa19.83■□□□□ 0.76
RPA3-201ENST00000223129 APAF1O14727 1248 aa19.83■□□□□ 0.76
RPA3-201ENST00000223129 KCNQ2O43526 872 aa19.83■□□□□ 0.76
RPA3-201ENST00000223129 PTF1AQ7RTS3 328 aa19.83■□□□□ 0.76
RPA3-201ENST00000223129 LGR6Q9HBX8 967 aa19.83■□□□□ 0.76
RPA3-201ENST00000223129 TMPOP42166 694 aaKnown RBP19.82■□□□□ 0.76
RPA3-201ENST00000223129 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
RPA3-201ENST00000223129 TRIM37O94972 964 aa19.81■□□□□ 0.76
RPA3-201ENST00000223129 SYTL4Q96C24 671 aaPredicted RBP19.81■□□□□ 0.76
RPA3-201ENST00000223129 DCAF5Q96JK2 942 aa19.81■□□□□ 0.76
RPA3-201ENST00000223129 DLG5Q8TDM6 1919 aa19.81■□□□□ 0.76
RPA3-201ENST00000223129 HSP90AB1P08238 724 aaKnown RBP19.81■□□□□ 0.76
RPA3-201ENST00000223129 PRIM1P49642 420 aaKnown RBP19.81■□□□□ 0.76
RPA3-201ENST00000223129 RIPK4P57078 832 aa19.81■□□□□ 0.76
RPA3-201ENST00000223129 SBF2Q86WG5 1849 aa19.81■□□□□ 0.76
RPA3-201ENST00000223129 BCL9O00512 1426 aa19.81■□□□□ 0.76
RPA3-201ENST00000223129 KDM6AO15550 1401 aaPredicted RBP19.81■□□□□ 0.76
RPA3-201ENST00000223129 DCTN1Q14203 1278 aa19.8■□□□□ 0.76
RPA3-201ENST00000223129 DOT1LQ8TEK3 1739 aa19.8■□□□□ 0.76
RPA3-201ENST00000223129 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
RPA3-201ENST00000223129 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
RPA3-201ENST00000223129 IL17REQ8NFR9 667 aa19.8■□□□□ 0.76
RPA3-201ENST00000223129 MCM10Q7L590 875 aa19.79■□□□□ 0.76
RPA3-201ENST00000223129 VIRMAQ69YN4 1812 aaKnown RBP19.78■□□□□ 0.76
RPA3-201ENST00000223129 RTF1Q92541 710 aaKnown RBP19.78■□□□□ 0.76
RPA3-201ENST00000223129 SCN11AQ9UI33 1791 aa19.77■□□□□ 0.76
RPA3-201ENST00000223129 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
RPA3-201ENST00000223129 ITGB4P16144 1822 aa19.76■□□□□ 0.75
RPA3-201ENST00000223129 ERVV-2B6SEH9 535 aa19.76■□□□□ 0.75
RPA3-201ENST00000223129 THUMPD2Q9BTF0 503 aaKnown RBP19.76■□□□□ 0.75
RPA3-201ENST00000223129 BCL11BQ9C0K0 894 aaPredicted RBP19.76■□□□□ 0.75
RPA3-201ENST00000223129 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
RPA3-201ENST00000223129 CABP4P57796 275 aa19.75■□□□□ 0.75
RPA3-201ENST00000223129 NFATC2IPQ8NCF5 419 aa19.75■□□□□ 0.75
RPA3-201ENST00000223129 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
RPA3-201ENST00000223129 NHSQ6T4R5 1651 aa19.75■□□□□ 0.75
RPA3-201ENST00000223129 PIGBQ92521 554 aa19.75■□□□□ 0.75
RPA3-201ENST00000223129 UPF1Q92900 1129 aaKnown RBP eCLIP19.74■□□□□ 0.75
RPA3-201ENST00000223129 TMOD3Q9NYL9 352 aa19.74■□□□□ 0.75
RPA3-201ENST00000223129 ADAMTS7Q9UKP4 1686 aa19.74■□□□□ 0.75
RPA3-201ENST00000223129 SLC52A2Q9HAB3 445 aa19.73■□□□□ 0.75
RPA3-201ENST00000223129 CEMIPQ8WUJ3 1361 aa19.73■□□□□ 0.75
RPA3-201ENST00000223129 APBA3O96018 575 aa19.71■□□□□ 0.75
RPA3-201ENST00000223129 TEFQ10587 303 aa19.71■□□□□ 0.75
RPA3-201ENST00000223129 LMOD3Q0VAK6 560 aa19.71■□□□□ 0.75
RPA3-201ENST00000223129 BTAF1O14981 1849 aa19.71■□□□□ 0.75
RPA3-201ENST00000223129 TNS1Q9HBL0 1735 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms