RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 CFAP44Q96MT7 982 aa31.13■■■□□ 2.57
GSK3A-201ENST00000222330 HAP1P54257 671 aaPredicted RBP31.12■■■□□ 2.57
GSK3A-201ENST00000222330 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.12■■■□□ 2.57
GSK3A-201ENST00000222330 RTF1Q92541 710 aaKnown RBP31.11■■■□□ 2.57
GSK3A-201ENST00000222330 CRBNQ96SW2 442 aa31.11■■■□□ 2.57
GSK3A-201ENST00000222330 CPDO75976 1380 aa31.09■■■□□ 2.57
GSK3A-201ENST00000222330 NLRP2Q9NX02 1062 aa31.09■■■□□ 2.57
GSK3A-201ENST00000222330 ABCA3Q99758 1704 aa31.08■■■□□ 2.57
GSK3A-201ENST00000222330 FRAT1Q92837 279 aaPredicted RBP31.08■■■□□ 2.57
GSK3A-201ENST00000222330 PRDM11Q9NQV5 511 aa31.08■■■□□ 2.57
GSK3A-201ENST00000222330 GNAT3A8MTJ3 354 aa31.07■■■□□ 2.57
GSK3A-201ENST00000222330 CSB-PGBD3P0DP91 1061 aa31.07■■■□□ 2.56
GSK3A-201ENST00000222330 CT47B1P0C2W7 299 aaPredicted RBP31.06■■■□□ 2.56
GSK3A-201ENST00000222330 ELL2O00472 640 aaPredicted RBP31.06■■■□□ 2.56
GSK3A-201ENST00000222330 TSPYL6Q8N831 410 aa31.06■■■□□ 2.56
GSK3A-201ENST00000222330 MIS18AQ9NYP9 233 aa31.06■■■□□ 2.56
GSK3A-201ENST00000222330 NCAPD2Q15021 1401 aa31.05■■■□□ 2.56
GSK3A-201ENST00000222330 CRB1P82279 1406 aa31.05■■■□□ 2.56
GSK3A-201ENST00000222330 CANXP27824 592 aaKnown RBP31.03■■■□□ 2.56
GSK3A-201ENST00000222330 HSPA1LP34931 641 aa31.03■■■□□ 2.56
GSK3A-201ENST00000222330 SSH1Q8WYL5 1049 aa31.03■■■□□ 2.56
GSK3A-201ENST00000222330 CHL1O00533 1208 aa31.03■■■□□ 2.56
GSK3A-201ENST00000222330 IL17REQ8NFR9 667 aa31.03■■■□□ 2.56
GSK3A-201ENST00000222330 MAP3K5Q99683 1374 aa31.03■■■□□ 2.56
GSK3A-201ENST00000222330 C8orf58Q8NAV2 365 aa31.02■■■□□ 2.56
GSK3A-201ENST00000222330 CAMTA1Q9Y6Y1 1673 aa31.01■■■□□ 2.56
GSK3A-201ENST00000222330 HTATSF1O43719 755 aaKnown RBP31.01■■■□□ 2.55
GSK3A-201ENST00000222330 SMC4Q9NTJ3 1288 aa31.01■■■□□ 2.55
GSK3A-201ENST00000222330 PLEKHO1Q53GL0 409 aaPredicted RBP31■■■□□ 2.55
GSK3A-201ENST00000222330 VAMP4O75379 141 aa31■■■□□ 2.55
GSK3A-201ENST00000222330 TNNQ9UQP3 1299 aa31■■■□□ 2.55
GSK3A-201ENST00000222330 ZNF530Q6P9A1 599 aaPredicted RBP30.99■■■□□ 2.55
GSK3A-201ENST00000222330 CCDC136Q96JN2 1154 aa30.99■■■□□ 2.55
GSK3A-201ENST00000222330 KRT24Q2M2I5 525 aa30.99■■■□□ 2.55
GSK3A-201ENST00000222330 COL22A1Q8NFW1 1626 aaPredicted RBP30.99■■■□□ 2.55
GSK3A-201ENST00000222330 NUTM2BA6NNL0 878 aaPredicted RBP30.98■■■□□ 2.55
GSK3A-201ENST00000222330 NUTM2EB1AL46 878 aaPredicted RBP30.98■■■□□ 2.55
GSK3A-201ENST00000222330 NUTM2AQ8IVF1 878 aaPredicted RBP30.98■■■□□ 2.55
GSK3A-201ENST00000222330 LMO7Q8WWI1 1683 aa30.98■■■□□ 2.55
GSK3A-201ENST00000222330 PANK1Q8TE04 598 aa30.98■■■□□ 2.55
GSK3A-201ENST00000222330 ABCC6O95255 1503 aa30.97■■■□□ 2.55
GSK3A-201ENST00000222330 TWISTNBQ3B726 338 aaPredicted RBP30.96■■■□□ 2.55
GSK3A-201ENST00000222330 AMOTQ4VCS5 1084 aa30.96■■■□□ 2.55
GSK3A-201ENST00000222330 LGR6Q9HBX8 967 aa30.96■■■□□ 2.55
GSK3A-201ENST00000222330 TCERG1O14776 1098 aaKnown RBP30.95■■■□□ 2.54
GSK3A-201ENST00000222330 RAPGEF4Q8WZA2 1011 aa30.95■■■□□ 2.54
GSK3A-201ENST00000222330 TSPYL4Q9UJ04 414 aa30.95■■■□□ 2.54
GSK3A-201ENST00000222330 ADAMTS2O95450 1211 aa30.93■■■□□ 2.54
GSK3A-201ENST00000222330 PDE3AQ14432 1141 aa30.93■■■□□ 2.54
GSK3A-201ENST00000222330 CLUAP1Q96AJ1 413 aa30.93■■■□□ 2.54
GSK3A-201ENST00000222330 FAM208AQ9UK61 1670 aaKnown RBP30.93■■■□□ 2.54
GSK3A-201ENST00000222330 AKAP4Q5JQC9 854 aa30.92■■■□□ 2.54
GSK3A-201ENST00000222330 MPRIPQ6WCQ1 1025 aa30.92■■■□□ 2.54
GSK3A-201ENST00000222330 RLBP1P12271 317 aa30.91■■■□□ 2.54
GSK3A-201ENST00000222330 STRN4Q9NRL3 753 aa30.9■■■□□ 2.54
GSK3A-201ENST00000222330 NOB1Q9ULX3 412 aaKnown RBP30.9■■■□□ 2.54
GSK3A-201ENST00000222330 COG6Q9Y2V7 657 aa30.9■■■□□ 2.54
GSK3A-201ENST00000222330 ALDH1L2Q3SY69 923 aa30.9■■■□□ 2.54
GSK3A-201ENST00000222330 C1orf141Q5JVX7 400 aa30.9■■■□□ 2.54
GSK3A-201ENST00000222330 TOM1L2Q6ZVM7 507 aa30.9■■■□□ 2.54
GSK3A-201ENST00000222330 WDR17Q8IZU2 1322 aa30.9■■■□□ 2.54
GSK3A-201ENST00000222330 LRRC37A3O60309 1634 aa30.89■■■□□ 2.54
GSK3A-201ENST00000222330 TATP17735 454 aaPredicted RBP30.89■■■□□ 2.54
GSK3A-201ENST00000222330 MEGF6O75095 1541 aa30.89■■■□□ 2.54
GSK3A-201ENST00000222330 COL5A2P05997 1499 aaPredicted RBP30.89■■■□□ 2.54
GSK3A-201ENST00000222330 ZKSCAN2Q63HK3 967 aa30.89■■■□□ 2.54
GSK3A-201ENST00000222330 JCADQ9P266 1359 aa30.89■■■□□ 2.53
GSK3A-201ENST00000222330 TAF7Q15545 349 aaPredicted RBP30.88■■■□□ 2.53
GSK3A-201ENST00000222330 ZNF428Q96B54 188 aa30.87■■■□□ 2.53
GSK3A-201ENST00000222330 CEMIPQ8WUJ3 1361 aa30.87■■■□□ 2.53
GSK3A-201ENST00000222330 EVA1CP58658 441 aa30.86■■■□□ 2.53
GSK3A-201ENST00000222330 LARP1Q6PKG0 1096 aaKnown RBP30.85■■■□□ 2.53
GSK3A-201ENST00000222330 MRPL50Q8N5N7 158 aaKnown RBP30.85■■■□□ 2.53
GSK3A-201ENST00000222330 TRIM27P14373 513 aa30.84■■■□□ 2.53
GSK3A-201ENST00000222330 RNMTO43148 476 aaKnown RBP30.83■■■□□ 2.53
GSK3A-201ENST00000222330 BTG4Q9NY30 223 aa30.83■■■□□ 2.53
GSK3A-201ENST00000222330 ATF7IPQ6VMQ6 1270 aa30.82■■■□□ 2.52
GSK3A-201ENST00000222330 DZIP1LQ8IYY4 767 aaKnown RBP30.81■■■□□ 2.52
GSK3A-201ENST00000222330 SPG7Q9UQ90 795 aa30.81■■■□□ 2.52
GSK3A-201ENST00000222330 FTSJ3Q8IY81 847 aaKnown RBP30.81■■■□□ 2.52
GSK3A-201ENST00000222330 KIF16BQ96L93 1317 aa30.8■■■□□ 2.52
GSK3A-201ENST00000222330 TEFQ10587 303 aa30.8■■■□□ 2.52
GSK3A-201ENST00000222330 VIRMAQ69YN4 1812 aaKnown RBP30.79■■■□□ 2.52
GSK3A-201ENST00000222330 BRPF1P55201 1214 aaPredicted RBP30.79■■■□□ 2.52
GSK3A-201ENST00000222330 USP35Q9P2H5 1018 aa30.78■■■□□ 2.52
GSK3A-201ENST00000222330 IPO8O15397 1037 aaKnown RBP30.78■■■□□ 2.52
GSK3A-201ENST00000222330 CARD10Q9BWT7 1032 aa30.78■■■□□ 2.52
GSK3A-201ENST00000222330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.78■■■□□ 2.52
GSK3A-201ENST00000222330 LRP6O75581 1613 aa30.77■■■□□ 2.52
GSK3A-201ENST00000222330 PHKG2P15735 406 aa30.77■■■□□ 2.52
GSK3A-201ENST00000222330 COL14A1Q05707 1796 aaKnown RBP30.76■■■□□ 2.51
GSK3A-201ENST00000222330 CYP27B1O15528 508 aa30.76■■■□□ 2.51
GSK3A-201ENST00000222330 KCNQ3O43525 872 aa30.76■■■□□ 2.51
GSK3A-201ENST00000222330 BABAM1Q9NWV8 329 aa30.76■■■□□ 2.51
GSK3A-201ENST00000222330 BTBD11A6QL63 1104 aa30.74■■■□□ 2.51
GSK3A-201ENST00000222330 IFNL2Q8IZJ0 200 aa30.74■■■□□ 2.51
GSK3A-201ENST00000222330 MVPQ14764 893 aaKnown RBP30.73■■■□□ 2.51
GSK3A-201ENST00000222330 C8orf37Q96NL8 207 aa30.73■■■□□ 2.51
GSK3A-201ENST00000222330 PLCH1Q4KWH8 1693 aa30.73■■■□□ 2.51
GSK3A-201ENST00000222330 MS4A1P11836 297 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms