RNA–Protein interactions for RNA: ENST00000222256.8

RAB3A-201, Transcript of RAB3A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3A, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-201ENST00000222256 PLEKHF1Q96S99 279 aa28.58■■■□□ 2.17
RAB3A-201ENST00000222256 OVOS2A0A0G2JMS6 1433 aa28.58■■■□□ 2.17
RAB3A-201ENST00000222256 ONECUT3O60422 494 aaPredicted RBP28.56■■■□□ 2.16
RAB3A-201ENST00000222256 NEFMP07197 916 aa28.56■■■□□ 2.16
RAB3A-201ENST00000222256 POTEAQ6S8J7 498 aa28.56■■■□□ 2.16
RAB3A-201ENST00000222256 RUNDC1Q96C34 613 aa28.55■■■□□ 2.16
RAB3A-201ENST00000222256 RXRBP28702 533 aa28.54■■■□□ 2.16
RAB3A-201ENST00000222256 CCDC146Q8IYE0 955 aa28.54■■■□□ 2.16
RAB3A-201ENST00000222256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.54■■■□□ 2.16
RAB3A-201ENST00000222256 THSD7AQ9UPZ6 1657 aa28.54■■■□□ 2.16
RAB3A-201ENST00000222256 MAPK8IP3Q9UPT6 1336 aa28.54■■■□□ 2.16
RAB3A-201ENST00000222256 AMOTQ4VCS5 1084 aa28.53■■■□□ 2.16
RAB3A-201ENST00000222256 PHACTR3Q96KR7 559 aa28.53■■■□□ 2.16
RAB3A-201ENST00000222256 PKD1L3Q7Z443 1732 aa28.53■■■□□ 2.16
RAB3A-201ENST00000222256 PLEKHO1Q53GL0 409 aaPredicted RBP28.53■■■□□ 2.16
RAB3A-201ENST00000222256 ZCRB1Q8TBF4 217 aaKnown RBP28.51■■■□□ 2.15
RAB3A-201ENST00000222256 SPG7Q9UQ90 795 aa28.51■■■□□ 2.15
RAB3A-201ENST00000222256 LRRC37A3O60309 1634 aa28.5■■■□□ 2.15
RAB3A-201ENST00000222256 A0A0G2JS52 829 aa28.49■■■□□ 2.15
RAB3A-201ENST00000222256 EXOC5O00471 708 aa28.49■■■□□ 2.15
RAB3A-201ENST00000222256 MYT1Q01538 1121 aa28.49■■■□□ 2.15
RAB3A-201ENST00000222256 DDB1Q16531 1140 aa28.49■■■□□ 2.15
RAB3A-201ENST00000222256 TNS2Q63HR2 1409 aa28.49■■■□□ 2.15
RAB3A-201ENST00000222256 MTHFSDQ2M296 383 aaKnown RBP28.48■■■□□ 2.15
RAB3A-201ENST00000222256 GAS2L2Q8NHY3 880 aa28.48■■■□□ 2.15
RAB3A-201ENST00000222256 SEPT12Q8IYM1 358 aa28.47■■■□□ 2.15
RAB3A-201ENST00000222256 SHANK3Q9BYB0 1731 aa28.46■■■□□ 2.15
RAB3A-201ENST00000222256 PCDH11XQ9BZA7 1347 aa28.45■■■□□ 2.14
RAB3A-201ENST00000222256 PCDH11YQ9BZA8 1340 aa28.45■■■□□ 2.14
RAB3A-201ENST00000222256 ZNF530Q6P9A1 599 aaPredicted RBP28.44■■■□□ 2.14
RAB3A-201ENST00000222256 APAF1O14727 1248 aa28.43■■■□□ 2.14
RAB3A-201ENST00000222256 NFE2L2Q16236 605 aa28.43■■■□□ 2.14
RAB3A-201ENST00000222256 TMPOP42166 694 aaKnown RBP28.42■■■□□ 2.14
RAB3A-201ENST00000222256 CYP27B1O15528 508 aa28.41■■■□□ 2.14
RAB3A-201ENST00000222256 C1orf141Q5JVX7 400 aa28.41■■■□□ 2.14
RAB3A-201ENST00000222256 IFNL2Q8IZJ0 200 aa28.41■■■□□ 2.14
RAB3A-201ENST00000222256 DDX54Q8TDD1 881 aaKnown RBP28.41■■■□□ 2.14
RAB3A-201ENST00000222256 DLG5Q8TDM6 1919 aa28.4■■■□□ 2.14
RAB3A-201ENST00000222256 PHKG2P15735 406 aa28.4■■■□□ 2.14
RAB3A-201ENST00000222256 PDE3BQ13370 1112 aa28.4■■■□□ 2.14
RAB3A-201ENST00000222256 AKAP4Q5JQC9 854 aa28.4■■■□□ 2.14
RAB3A-201ENST00000222256 RGS12O14924 1447 aa28.4■■■□□ 2.14
RAB3A-201ENST00000222256 BRWD3Q6RI45 1802 aa28.39■■■□□ 2.14
RAB3A-201ENST00000222256 RIPK4P57078 832 aa28.38■■■□□ 2.13
RAB3A-201ENST00000222256 RRP7AQ9Y3A4 280 aaKnown RBP28.38■■■□□ 2.13
RAB3A-201ENST00000222256 MAP3K5Q99683 1374 aa28.37■■■□□ 2.13
RAB3A-201ENST00000222256 GNAT3A8MTJ3 354 aa28.37■■■□□ 2.13
RAB3A-201ENST00000222256 NEUROD2Q15784 382 aa28.36■■■□□ 2.13
RAB3A-201ENST00000222256 MARCH10Q8NA82 808 aaPredicted RBP28.36■■■□□ 2.13
RAB3A-201ENST00000222256 HSP90AB1P08238 724 aaKnown RBP28.35■■■□□ 2.13
RAB3A-201ENST00000222256 HTATSF1O43719 755 aaKnown RBP28.34■■■□□ 2.13
RAB3A-201ENST00000222256 NKX1-1Q15270 411 aaPredicted RBP28.34■■■□□ 2.13
RAB3A-201ENST00000222256 NCBP3Q53F19 620 aaKnown RBP28.34■■■□□ 2.13
RAB3A-201ENST00000222256 KRT27Q7Z3Y8 459 aa28.33■■■□□ 2.13
RAB3A-201ENST00000222256 NGEFQ8N5V2 710 aa28.33■■■□□ 2.13
RAB3A-201ENST00000222256 LMOD3Q0VAK6 560 aa28.33■■■□□ 2.13
RAB3A-201ENST00000222256 SENP3-EIF4A1A0A087X0R7 540 aa28.32■■■□□ 2.12
RAB3A-201ENST00000222256 RTF1Q92541 710 aaKnown RBP28.32■■■□□ 2.12
RAB3A-201ENST00000222256 DCAF5Q96JK2 942 aa28.31■■■□□ 2.12
RAB3A-201ENST00000222256 VIRMAQ69YN4 1812 aaKnown RBP28.31■■■□□ 2.12
RAB3A-201ENST00000222256 MPRIPQ6WCQ1 1025 aa28.3■■■□□ 2.12
RAB3A-201ENST00000222256 TRIM35Q9UPQ4 493 aa28.3■■■□□ 2.12
RAB3A-201ENST00000222256 ADAMTS7Q9UKP4 1686 aa28.29■■■□□ 2.12
RAB3A-201ENST00000222256 CCDC27Q2M243 656 aa28.29■■■□□ 2.12
RAB3A-201ENST00000222256 SCN11AQ9UI33 1791 aa28.29■■■□□ 2.12
RAB3A-201ENST00000222256 KDM6AO15550 1401 aaPredicted RBP28.28■■■□□ 2.12
RAB3A-201ENST00000222256 RNMTO43148 476 aaKnown RBP28.28■■■□□ 2.12
RAB3A-201ENST00000222256 HNRNPUQ00839 825 aaKnown RBP eCLIP28.28■■■□□ 2.12
RAB3A-201ENST00000222256 SALL2Q9Y467 1007 aaPredicted RBP28.28■■■□□ 2.12
RAB3A-201ENST00000222256 BCL9O00512 1426 aa28.27■■■□□ 2.12
RAB3A-201ENST00000222256 IL17REQ8NFR9 667 aa28.27■■■□□ 2.12
RAB3A-201ENST00000222256 LGR6Q9HBX8 967 aa28.27■■■□□ 2.12
RAB3A-201ENST00000222256 KAT6BQ8WYB5 2073 aa28.26■■■□□ 2.11
RAB3A-201ENST00000222256 MCM10Q7L590 875 aa28.26■■■□□ 2.11
RAB3A-201ENST00000222256 DCTN1Q14203 1278 aa28.25■■■□□ 2.11
RAB3A-201ENST00000222256 FAM182BQ5T319 152 aa28.25■■■□□ 2.11
RAB3A-201ENST00000222256 CEMIPQ8WUJ3 1361 aa28.25■■■□□ 2.11
RAB3A-201ENST00000222256 WWC1Q8IX03 1113 aa28.24■■■□□ 2.11
RAB3A-201ENST00000222256 TOGARAM1Q9Y4F4 1720 aa28.23■■■□□ 2.11
RAB3A-201ENST00000222256 ERVV-2B6SEH9 535 aa28.23■■■□□ 2.11
RAB3A-201ENST00000222256 FAM196AQ6ZSG2 479 aa28.23■■■□□ 2.11
RAB3A-201ENST00000222256 EP400Q96L91 3159 aa28.22■■■□□ 2.11
RAB3A-201ENST00000222256 DOT1LQ8TEK3 1739 aa28.22■■■□□ 2.11
RAB3A-201ENST00000222256 THUMPD2Q9BTF0 503 aaKnown RBP28.21■■■□□ 2.11
RAB3A-201ENST00000222256 MRC1P22897 1456 aa28.19■■■□□ 2.1
RAB3A-201ENST00000222256 ITGB4P16144 1822 aa28.19■■■□□ 2.1
RAB3A-201ENST00000222256 SBF2Q86WG5 1849 aa28.19■■■□□ 2.1
RAB3A-201ENST00000222256 CABP4P57796 275 aa28.18■■■□□ 2.1
RAB3A-201ENST00000222256 CALD1Q05682 793 aaKnown RBP28.18■■■□□ 2.1
RAB3A-201ENST00000222256 TEFQ10587 303 aa28.18■■■□□ 2.1
RAB3A-201ENST00000222256 SLC52A2Q9HAB3 445 aa28.18■■■□□ 2.1
RAB3A-201ENST00000222256 ZNF521Q96K83 1311 aa28.18■■■□□ 2.1
RAB3A-201ENST00000222256 PRIM1P49642 420 aaKnown RBP28.17■■■□□ 2.1
RAB3A-201ENST00000222256 WDR63Q8IWG1 891 aa28.17■■■□□ 2.1
RAB3A-201ENST00000222256 ACSBG1Q96GR2 724 aa28.17■■■□□ 2.1
RAB3A-201ENST00000222256 SIPA1L3O60292 1781 aaPredicted RBP28.17■■■□□ 2.1
RAB3A-201ENST00000222256 NFATC2IPQ8NCF5 419 aa28.16■■■□□ 2.1
RAB3A-201ENST00000222256 NHSQ6T4R5 1651 aa28.15■■■□□ 2.1
RAB3A-201ENST00000222256 SYTL4Q96C24 671 aaPredicted RBP28.15■■■□□ 2.1
RAB3A-201ENST00000222256 TMOD3Q9NYL9 352 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms