RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 RIMBP3BA6NNM3 1639 aa22.83■■□□□ 1.24
CACTIN-201ENST00000221899 RIMBP3Q9UFD9 1639 aa22.83■■□□□ 1.24
CACTIN-201ENST00000221899 NASPP49321 788 aaPredicted RBP22.82■■□□□ 1.24
CACTIN-201ENST00000221899 EIF4A2Q14240 407 aaKnown RBP22.82■■□□□ 1.24
CACTIN-201ENST00000221899 KLHL40Q2TBA0 621 aa22.82■■□□□ 1.24
CACTIN-201ENST00000221899 RGS12O14924 1447 aa22.82■■□□□ 1.24
CACTIN-201ENST00000221899 CCDC61Q9Y6R9 512 aa22.82■■□□□ 1.24
CACTIN-201ENST00000221899 REREQ9P2R6 1566 aa22.82■■□□□ 1.24
CACTIN-201ENST00000221899 SOX12O15370 315 aa22.81■■□□□ 1.24
CACTIN-201ENST00000221899 MIS18AQ9NYP9 233 aa22.81■■□□□ 1.24
CACTIN-201ENST00000221899 ZGPATQ8N5A5 531 aaKnown RBP22.81■■□□□ 1.24
CACTIN-201ENST00000221899 KIF24Q5T7B8 1368 aa22.81■■□□□ 1.24
CACTIN-201ENST00000221899 CLEC17AQ6ZS10 378 aa22.8■■□□□ 1.24
CACTIN-201ENST00000221899 RPAP2Q8IXW5 612 aaPredicted RBP22.8■■□□□ 1.24
CACTIN-201ENST00000221899 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
CACTIN-201ENST00000221899 CAVIN1Q6NZI2 390 aaKnown RBP22.8■■□□□ 1.24
CACTIN-201ENST00000221899 RTL1A6NKG5 1358 aa22.79■■□□□ 1.24
CACTIN-201ENST00000221899 CASC1Q6TDU7 716 aa22.78■■□□□ 1.24
CACTIN-201ENST00000221899 CHL1O00533 1208 aa22.78■■□□□ 1.24
CACTIN-201ENST00000221899 CHAMP1Q96JM3 812 aa22.78■■□□□ 1.24
CACTIN-201ENST00000221899 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
CACTIN-201ENST00000221899 SLC4A2P04920 1241 aa22.78■■□□□ 1.24
CACTIN-201ENST00000221899 NUCB2P80303 420 aa22.78■■□□□ 1.24
CACTIN-201ENST00000221899 SLC4A10Q6U841 1118 aa22.78■■□□□ 1.24
CACTIN-201ENST00000221899 PRR36Q9H6K5 1346 aa22.76■■□□□ 1.23
CACTIN-201ENST00000221899 F6X3S4 739 aa22.76■■□□□ 1.23
CACTIN-201ENST00000221899 CCDC173Q0VFZ6 552 aa22.76■■□□□ 1.23
CACTIN-201ENST00000221899 ST18O60284 1047 aa22.75■■□□□ 1.23
CACTIN-201ENST00000221899 HSP90AB2PQ58FF8 381 aa22.75■■□□□ 1.23
CACTIN-201ENST00000221899 FOXD4L5Q5VV16 416 aaPredicted RBP22.75■■□□□ 1.23
CACTIN-201ENST00000221899 TSHZ3Q63HK5 1081 aa22.75■■□□□ 1.23
CACTIN-201ENST00000221899 FOXD4L4Q8WXT5 416 aaPredicted RBP22.75■■□□□ 1.23
CACTIN-201ENST00000221899 LMBRD1Q9NUN5 540 aa22.75■■□□□ 1.23
CACTIN-201ENST00000221899 CYP2E1P05181 493 aaPredicted RBP22.75■■□□□ 1.23
CACTIN-201ENST00000221899 ANP32BQ92688 251 aaKnown RBP22.74■■□□□ 1.23
CACTIN-201ENST00000221899 G2E3Q7L622 706 aa22.74■■□□□ 1.23
CACTIN-201ENST00000221899 PRPF40AO75400 957 aaKnown RBP22.73■■□□□ 1.23
CACTIN-201ENST00000221899 ZSCAN23Q3MJ62 389 aa22.73■■□□□ 1.23
CACTIN-201ENST00000221899 RBM27Q9P2N5 1060 aaKnown RBP22.73■■□□□ 1.23
CACTIN-201ENST00000221899 FOXO3O43524 673 aa22.72■■□□□ 1.23
CACTIN-201ENST00000221899 PTPRCP08575 1304 aa22.72■■□□□ 1.23
CACTIN-201ENST00000221899 REC8O95072 547 aa22.72■■□□□ 1.23
CACTIN-201ENST00000221899 HAP1P54257 671 aaPredicted RBP22.72■■□□□ 1.23
CACTIN-201ENST00000221899 MON2Q7Z3U7 1717 aa22.72■■□□□ 1.23
CACTIN-201ENST00000221899 PPP1R9BQ96SB3 815 aa22.72■■□□□ 1.23
CACTIN-201ENST00000221899 ZDHHC9Q9Y397 364 aa22.72■■□□□ 1.23
CACTIN-201ENST00000221899 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
CACTIN-201ENST00000221899 ERC2O15083 957 aa22.71■■□□□ 1.23
CACTIN-201ENST00000221899 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.71■■□□□ 1.23
CACTIN-201ENST00000221899 EXOC6BQ9Y2D4 811 aa22.71■■□□□ 1.23
CACTIN-201ENST00000221899 IBTKQ9P2D0 1353 aaPredicted RBP22.7■■□□□ 1.23
CACTIN-201ENST00000221899 KIAA0232Q92628 1395 aa22.7■■□□□ 1.22
CACTIN-201ENST00000221899 C3P01024 1663 aa22.69■■□□□ 1.22
CACTIN-201ENST00000221899 ZNF445P59923 1031 aa22.69■■□□□ 1.22
CACTIN-201ENST00000221899 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
CACTIN-201ENST00000221899 CWC22Q9HCG8 908 aaKnown RBP22.69■■□□□ 1.22
CACTIN-201ENST00000221899 TTC21BQ7Z4L5 1316 aa22.69■■□□□ 1.22
CACTIN-201ENST00000221899 PDE1AP54750 535 aa22.68■■□□□ 1.22
CACTIN-201ENST00000221899 GPT2Q8TD30 523 aa22.68■■□□□ 1.22
CACTIN-201ENST00000221899 RBSNQ9H1K0 784 aa22.68■■□□□ 1.22
CACTIN-201ENST00000221899 HMMRO75330 724 aa22.68■■□□□ 1.22
CACTIN-201ENST00000221899 NOL8Q76FK4 1167 aaKnown RBP22.68■■□□□ 1.22
CACTIN-201ENST00000221899 PRIM1P49642 420 aaKnown RBP22.67■■□□□ 1.22
CACTIN-201ENST00000221899 NEK4P51957 841 aa22.67■■□□□ 1.22
CACTIN-201ENST00000221899 TSPYL4Q9UJ04 414 aa22.67■■□□□ 1.22
CACTIN-201ENST00000221899 ACEP12821 1306 aa22.67■■□□□ 1.22
CACTIN-201ENST00000221899 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
CACTIN-201ENST00000221899 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
CACTIN-201ENST00000221899 ZSCAN30Q86W11 494 aa22.67■■□□□ 1.22
CACTIN-201ENST00000221899 ITSN1Q15811 1721 aa22.66■■□□□ 1.22
CACTIN-201ENST00000221899 HSP90AA2PQ14568 343 aaPredicted RBP22.66■■□□□ 1.22
CACTIN-201ENST00000221899 NECTIN2Q92692 538 aa22.66■■□□□ 1.22
CACTIN-201ENST00000221899 CRB1P82279 1406 aa22.66■■□□□ 1.22
CACTIN-201ENST00000221899 NRKQ7Z2Y5 1582 aa22.66■■□□□ 1.22
CACTIN-201ENST00000221899 AKAP12Q02952 1782 aa22.65■■□□□ 1.22
CACTIN-201ENST00000221899 NSFL1CQ9UNZ2 370 aaKnown RBP22.65■■□□□ 1.22
CACTIN-201ENST00000221899 MTHFSDQ2M296 383 aaKnown RBP22.64■■□□□ 1.22
CACTIN-201ENST00000221899 MSNP26038 577 aaKnown RBP22.64■■□□□ 1.21
CACTIN-201ENST00000221899 MAP3K19Q56UN5 1328 aa22.64■■□□□ 1.21
CACTIN-201ENST00000221899 RTF1Q92541 710 aaKnown RBP22.63■■□□□ 1.21
CACTIN-201ENST00000221899 ROBO2Q9HCK4 1378 aa22.63■■□□□ 1.21
CACTIN-201ENST00000221899 TMX3Q96JJ7 454 aa22.63■■□□□ 1.21
CACTIN-201ENST00000221899 KIAA1211Q6ZU35 1233 aa22.62■■□□□ 1.21
CACTIN-201ENST00000221899 RILPL2Q969X0 211 aa22.62■■□□□ 1.21
CACTIN-201ENST00000221899 TMEM63CQ9P1W3 806 aa22.62■■□□□ 1.21
CACTIN-201ENST00000221899 PALD1Q9ULE6 856 aa22.62■■□□□ 1.21
CACTIN-201ENST00000221899 SYCE3A1L190 88 aa22.61■■□□□ 1.21
CACTIN-201ENST00000221899 CCT4P50991 539 aaKnown RBP22.61■■□□□ 1.21
CACTIN-201ENST00000221899 TSPOAP1O95153 1857 aa22.61■■□□□ 1.21
CACTIN-201ENST00000221899 PEAK1Q9H792 1746 aa22.61■■□□□ 1.21
CACTIN-201ENST00000221899 GNAI2P04899 355 aa22.61■■□□□ 1.21
CACTIN-201ENST00000221899 TRIM6-TRIM34B2RNG4 842 aa22.61■■□□□ 1.21
CACTIN-201ENST00000221899 OSBPL3Q9H4L5 887 aa22.61■■□□□ 1.21
CACTIN-201ENST00000221899 PPP6R1Q9UPN7 881 aa22.61■■□□□ 1.21
CACTIN-201ENST00000221899 RIMS1Q86UR5 1692 aaKnown RBP22.6■■□□□ 1.21
CACTIN-201ENST00000221899 PNMA6EA0A0J9YXQ4 647 aa22.6■■□□□ 1.21
CACTIN-201ENST00000221899 FOXD4L6Q3SYB3 417 aaPredicted RBP22.6■■□□□ 1.21
CACTIN-201ENST00000221899 FOXD4L3Q6VB84 417 aaPredicted RBP22.6■■□□□ 1.21
CACTIN-201ENST00000221899 ESYT1Q9BSJ8 1104 aa22.6■■□□□ 1.21
CACTIN-201ENST00000221899 ANO2Q9NQ90 1003 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms