RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 EN1Q05925 392 aaPredicted RBP31.65■■■□□ 2.66
HOMER3-201ENST00000221222 OVOS2A0A0G2JMS6 1433 aa31.64■■■□□ 2.66
HOMER3-201ENST00000221222 PLEKHG2Q9H7P9 1386 aa31.64■■■□□ 2.66
HOMER3-201ENST00000221222 RAPGEF4Q8WZA2 1011 aa31.64■■■□□ 2.66
HOMER3-201ENST00000221222 U2SURPO15042 1029 aaKnown RBP31.63■■■□□ 2.65
HOMER3-201ENST00000221222 SULT6B1Q6IMI4 303 aa31.63■■■□□ 2.65
HOMER3-201ENST00000221222 TNS2Q63HR2 1409 aa31.63■■■□□ 2.65
HOMER3-201ENST00000221222 TNS1Q9HBL0 1735 aaKnown RBP31.62■■■□□ 2.65
HOMER3-201ENST00000221222 AEBP1Q8IUX7 1158 aa31.62■■■□□ 2.65
HOMER3-201ENST00000221222 TATP17735 454 aaPredicted RBP31.61■■■□□ 2.65
HOMER3-201ENST00000221222 DDB1Q16531 1140 aa31.61■■■□□ 2.65
HOMER3-201ENST00000221222 PKD1L3Q7Z443 1732 aa31.61■■■□□ 2.65
HOMER3-201ENST00000221222 PSDA5PKW4 1024 aaPredicted RBP31.6■■■□□ 2.65
HOMER3-201ENST00000221222 SHANK3Q9BYB0 1731 aa31.6■■■□□ 2.65
HOMER3-201ENST00000221222 TRIM37O94972 964 aa31.59■■■□□ 2.65
HOMER3-201ENST00000221222 EXOC5O00471 708 aa31.58■■■□□ 2.65
HOMER3-201ENST00000221222 PDE3BQ13370 1112 aa31.58■■■□□ 2.65
HOMER3-201ENST00000221222 FAM196AQ6ZSG2 479 aa31.57■■■□□ 2.64
HOMER3-201ENST00000221222 HMOX1P09601 288 aa31.56■■■□□ 2.64
HOMER3-201ENST00000221222 U2AF1L5P0DN76 240 aaPredicted RBP31.56■■■□□ 2.64
HOMER3-201ENST00000221222 U2AF1Q01081 240 aaKnown RBP eCLIP31.56■■■□□ 2.64
HOMER3-201ENST00000221222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.55■■■□□ 2.64
HOMER3-201ENST00000221222 CCDC184Q52MB2 194 aa31.54■■■□□ 2.64
HOMER3-201ENST00000221222 ZCRB1Q8TBF4 217 aaKnown RBP31.54■■■□□ 2.64
HOMER3-201ENST00000221222 EZH2Q15910 746 aaKnown RBP31.53■■■□□ 2.64
HOMER3-201ENST00000221222 RSPH6AQ9H0K4 717 aa31.52■■■□□ 2.64
HOMER3-201ENST00000221222 FCHSD2O94868 740 aa31.51■■■□□ 2.63
HOMER3-201ENST00000221222 APBA3O96018 575 aa31.49■■■□□ 2.63
HOMER3-201ENST00000221222 MARCH10Q8NA82 808 aaPredicted RBP31.49■■■□□ 2.63
HOMER3-201ENST00000221222 SPG7Q9UQ90 795 aa31.49■■■□□ 2.63
HOMER3-201ENST00000221222 AMOTQ4VCS5 1084 aa31.48■■■□□ 2.63
HOMER3-201ENST00000221222 MRS2Q9HD23 443 aa31.48■■■□□ 2.63
HOMER3-201ENST00000221222 PCDH11XQ9BZA7 1347 aa31.48■■■□□ 2.63
HOMER3-201ENST00000221222 PCDH11YQ9BZA8 1340 aa31.48■■■□□ 2.63
HOMER3-201ENST00000221222 WDR43Q15061 677 aaKnown RBP eCLIP31.46■■■□□ 2.63
HOMER3-201ENST00000221222 PLEKHO1Q53GL0 409 aaPredicted RBP31.46■■■□□ 2.63
HOMER3-201ENST00000221222 BCL9O00512 1426 aa31.46■■■□□ 2.63
HOMER3-201ENST00000221222 PRKAR2BP31323 418 aa31.45■■■□□ 2.63
HOMER3-201ENST00000221222 R3HDM1Q15032 1099 aaKnown RBP31.45■■■□□ 2.63
HOMER3-201ENST00000221222 CAMKK2Q96RR4 588 aa31.45■■■□□ 2.63
HOMER3-201ENST00000221222 CYP27B1O15528 508 aa31.43■■■□□ 2.62
HOMER3-201ENST00000221222 DDX54Q8TDD1 881 aaKnown RBP31.43■■■□□ 2.62
HOMER3-201ENST00000221222 PNISRQ8TF01 805 aaKnown RBP31.42■■■□□ 2.62
HOMER3-201ENST00000221222 PNNQ9H307 717 aaKnown RBP31.42■■■□□ 2.62
HOMER3-201ENST00000221222 LRP5O75197 1615 aa31.41■■■□□ 2.62
HOMER3-201ENST00000221222 CCER2I3L3R5 266 aa31.41■■■□□ 2.62
HOMER3-201ENST00000221222 SBF2Q86WG5 1849 aa31.41■■■□□ 2.62
HOMER3-201ENST00000221222 PLEKHF1Q96S99 279 aa31.4■■■□□ 2.62
HOMER3-201ENST00000221222 ADAMTS8Q9UP79 889 aa31.4■■■□□ 2.62
HOMER3-201ENST00000221222 IFNL2Q8IZJ0 200 aa31.39■■■□□ 2.62
HOMER3-201ENST00000221222 PHACTR3Q96KR7 559 aa31.39■■■□□ 2.62
HOMER3-201ENST00000221222 PHKG2P15735 406 aa31.38■■■□□ 2.61
HOMER3-201ENST00000221222 ZNF530Q6P9A1 599 aaPredicted RBP31.38■■■□□ 2.61
HOMER3-201ENST00000221222 MIER1Q8N108 512 aa31.38■■■□□ 2.61
HOMER3-201ENST00000221222 NKX1-1Q15270 411 aaPredicted RBP31.37■■■□□ 2.61
HOMER3-201ENST00000221222 MTHFSDQ2M296 383 aaKnown RBP31.37■■■□□ 2.61
HOMER3-201ENST00000221222 RREB1Q92766 1687 aa31.35■■■□□ 2.61
HOMER3-201ENST00000221222 DOT1LQ8TEK3 1739 aa31.34■■■□□ 2.61
HOMER3-201ENST00000221222 GAS2L2Q8NHY3 880 aa31.34■■■□□ 2.61
HOMER3-201ENST00000221222 NUP188Q5SRE5 1749 aa31.34■■■□□ 2.61
HOMER3-201ENST00000221222 NEFMP07197 916 aa31.33■■■□□ 2.61
HOMER3-201ENST00000221222 C1orf141Q5JVX7 400 aa31.33■■■□□ 2.61
HOMER3-201ENST00000221222 NHSQ6T4R5 1651 aa31.32■■■□□ 2.61
HOMER3-201ENST00000221222 AKAP4Q5JQC9 854 aa31.32■■■□□ 2.6
HOMER3-201ENST00000221222 TOGARAM1Q9Y4F4 1720 aa31.32■■■□□ 2.6
HOMER3-201ENST00000221222 HSP90AB1P08238 724 aaKnown RBP31.31■■■□□ 2.6
HOMER3-201ENST00000221222 MAPK8IP3Q9UPT6 1336 aa31.31■■■□□ 2.6
HOMER3-201ENST00000221222 VIRMAQ69YN4 1812 aaKnown RBP31.3■■■□□ 2.6
HOMER3-201ENST00000221222 ADAMTS7Q9UKP4 1686 aa31.3■■■□□ 2.6
HOMER3-201ENST00000221222 RUNDC1Q96C34 613 aa31.3■■■□□ 2.6
HOMER3-201ENST00000221222 SCN11AQ9UI33 1791 aa31.29■■■□□ 2.6
HOMER3-201ENST00000221222 DLG5Q8TDM6 1919 aa31.29■■■□□ 2.6
HOMER3-201ENST00000221222 DCAF5Q96JK2 942 aa31.28■■■□□ 2.6
HOMER3-201ENST00000221222 KAT6BQ8WYB5 2073 aa31.27■■■□□ 2.6
HOMER3-201ENST00000221222 MAP3K5Q99683 1374 aa31.27■■■□□ 2.6
HOMER3-201ENST00000221222 KDM6AO15550 1401 aaPredicted RBP31.27■■■□□ 2.6
HOMER3-201ENST00000221222 PTF1AQ7RTS3 328 aa31.27■■■□□ 2.6
HOMER3-201ENST00000221222 CCDC146Q8IYE0 955 aa31.27■■■□□ 2.6
HOMER3-201ENST00000221222 ITGB4P16144 1822 aa31.26■■■□□ 2.6
HOMER3-201ENST00000221222 GNAT3A8MTJ3 354 aa31.24■■■□□ 2.59
HOMER3-201ENST00000221222 NFE2L2Q16236 605 aa31.24■■■□□ 2.59
HOMER3-201ENST00000221222 ACSBG1Q96GR2 724 aa31.24■■■□□ 2.59
HOMER3-201ENST00000221222 NBPF14Q5TI25 921 aa31.23■■■□□ 2.59
HOMER3-201ENST00000221222 BCL11BQ9C0K0 894 aaPredicted RBP31.23■■■□□ 2.59
HOMER3-201ENST00000221222 MPRIPQ6WCQ1 1025 aa31.22■■■□□ 2.59
HOMER3-201ENST00000221222 KCNQ2O43526 872 aa31.21■■■□□ 2.59
HOMER3-201ENST00000221222 PRIM1P49642 420 aaKnown RBP31.21■■■□□ 2.59
HOMER3-201ENST00000221222 FAM9BQ8IZU0 186 aa31.21■■■□□ 2.59
HOMER3-201ENST00000221222 BTAF1O14981 1849 aa31.21■■■□□ 2.59
HOMER3-201ENST00000221222 ERVV-2B6SEH9 535 aa31.2■■■□□ 2.59
HOMER3-201ENST00000221222 HTATSF1O43719 755 aaKnown RBP31.19■■■□□ 2.58
HOMER3-201ENST00000221222 MRC1P22897 1456 aa31.19■■■□□ 2.58
HOMER3-201ENST00000221222 RNMTO43148 476 aaKnown RBP31.18■■■□□ 2.58
HOMER3-201ENST00000221222 TMPOP42166 694 aaKnown RBP31.18■■■□□ 2.58
HOMER3-201ENST00000221222 LGR6Q9HBX8 967 aa31.17■■■□□ 2.58
HOMER3-201ENST00000221222 IL17REQ8NFR9 667 aa31.17■■■□□ 2.58
HOMER3-201ENST00000221222 SYTL4Q96C24 671 aaPredicted RBP31.17■■■□□ 2.58
HOMER3-201ENST00000221222 CEMIPQ8WUJ3 1361 aa31.16■■■□□ 2.58
HOMER3-201ENST00000221222 RGPD3A6NKT7 1758 aaPredicted RBP31.15■■■□□ 2.58
HOMER3-201ENST00000221222 RGPD4Q7Z3J3 1758 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms